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777 results for “GFP”

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zenodo36/100

Siwiec et al 2024 - RAW full microscopic images; DG PV-SOM-GFP staining in Htr7-GFP mice

The archive contains raw microscopic images in Zeiss (.czi) format obtained during the Siwiec 2024 study (https://www.biorxiv.org/content/10.1101/2024.09.17.613425v1). Datafiles contain Z-stacks of microscopic images with metadata and four image channels (immunostaining for parvalbumin, somatostatin and GFP, with DAPI nuclear counterstain; see describing work for technical details) of transverse hippocampal sections from transgenic Htr7-GFP mice Tg(Htr7-EGFP)ST29Gsat.   Example open software supporting .czi files: FIJI, Bio-Formats, ZEISS libczi C++ library (github.com/ZEISS/libczi) and its implementations (e.g. aicspylibczi in Python).

opencc-by-4.0Oct 2024View details →

zenodo36/100

Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein

Data underlying the figures in the publication “Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein”, published in ACS Catal. 2021, 11, 17, 10705–10712. https://pubs.acs.org/doi/10.1021/acscatal.1c02405 Table of contents: 1. Dataset; Excel file with the experimental data for figures 2a, 2b, 3b and 5, plus protocol for in vivo catalysis, sequencing data and the selection for rescreening.

opencc-by-4.0Sep 2021View details →

zenodo36/100

AQ2935 unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2012-02-09T11:45:40+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=-7zxivYgy28</li> <li>strain : AQ2935</li> <li>timestamp : 2012-02-09T11:45:40+00:00</li> <li>gene : nRHO-1;unc-79</li> <li>chromosome : I;III</li> <li>allele : nzIs29;e1068</li> <li>strain_description : unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-79 (e1068) nRHO-1 G14V on food L_2012_02_09__11_45_40___1___4</li> <li>total time (s) : 899.0</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.51738</li> <li>number of segmented skeletons : 26703</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2934 nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-11T12:56:32+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=3dHzxTgmsv4</li> <li>strain : AQ2934</li> <li>timestamp : 2011-11-11T12:56:32+00:00</li> <li>gene : nca-2;nRHO-1</li> <li>chromosome : III;I</li> <li>allele : gk5;nzIs29</li> <li>strain_description : nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-2 (gk5) nRHO-1 QT309 on food L_2011_11_11__12_56_32___8___3</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 2862</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2935 unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-10T10:18:56+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=-YLfeLUx968</li> <li>strain : AQ2935</li> <li>timestamp : 2011-11-10T10:18:56+00:00</li> <li>gene : nRHO-1;unc-79</li> <li>chromosome : I;III</li> <li>allele : nzIs29;e1068</li> <li>strain_description : unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-79 (e1068) nRHO-1 QT309 on food L_2011_11_10__10_18_56___8___1</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 24617</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2934 nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-10T10:59:28+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=hXCiwCOdC2s</li> <li>strain : AQ2934</li> <li>timestamp : 2011-11-10T10:59:28+00:00</li> <li>gene : nca-2;nRHO-1</li> <li>chromosome : III;I</li> <li>allele : gk5;nzIs29</li> <li>strain_description : nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-2 (gk5) nRHO-1 QT309 on food R_2011_11_10__10_59_28___8___3</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 13523</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2932 nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-10T12:00:40+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=Lg-7pqor0c8</li> <li>strain : AQ2932</li> <li>timestamp : 2011-11-10T12:00:40+00:00</li> <li>gene : nca-2;nRHO-1;unc-77</li> <li>chromosome : III;I;IV</li> <li>allele : gk5;nzIs29;gk9</li> <li>strain_description : nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-1 (gk9) nca-2 (gk5) nRHO-1 QT309 on food R_2011_11_10__12_00_40___8___6</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 25039</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

QT309 nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-10-13T13:26:21+01:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=4HeB4Vifigw</li> <li>strain : QT309</li> <li>timestamp : 2011-10-13T13:26:21+01:00</li> <li>gene : nRHO-1</li> <li>chromosome : I</li> <li>allele : nzIs29</li> <li>strain_description : nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nRHO-1 (QT309) on food L_2011_10_13__13_26_21___8___7</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 12039</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

QT309 nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-10-18T13:29:28+01:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=CLUVOaSi4lI</li> <li>strain : QT309</li> <li>timestamp : 2011-10-18T13:29:28+01:00</li> <li>gene : nRHO-1</li> <li>chromosome : I</li> <li>allele : nzIs29</li> <li>strain_description : nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nRHO-1 (QT309) on food R_2011_10_18__13_29_28___8___7</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 9865</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2935 unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T10:43:53+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=xMV7_nczXu4</li> <li>strain : AQ2935</li> <li>timestamp : 2011-11-09T10:43:53+00:00</li> <li>gene : nRHO-1;unc-79</li> <li>chromosome : I;III</li> <li>allele : nzIs29;e1068</li> <li>strain_description : unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-79 (e1068) nRHO-1 QT309 on food L_2011_11_09__10_43_53___8___2</li> <li>total time (s) : 898.933</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 26875</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2934 nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T11:46:11+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=dj1ujzh-BeI</li> <li>strain : AQ2934</li> <li>timestamp : 2011-11-09T11:46:11+00:00</li> <li>gene : nca-2;nRHO-1</li> <li>chromosome : III;I</li> <li>allele : gk5;nzIs29</li> <li>strain_description : nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-2 (gk5) nRHO-1 QT309 on food L_2011_11_09__11_46_11___8___5</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 7770</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2936 unc-80(e1069)V; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T12:06:08+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=Vk1mV-v6vaw</li> <li>strain : AQ2936</li> <li>timestamp : 2011-11-09T12:06:08+00:00</li> <li>gene : nRHO-1;unc-80</li> <li>chromosome : I;V</li> <li>allele : nzIs29;e1069</li> <li>strain_description : unc-80(e1069)V; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-80 (e1069) nRHO-1 QT309 on food L_2011_11_09__12_06_08___8___6</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 26132</li> </ul>

opencc-by-4.0Oct 2017View details →

zenodo36/100

AQ2932 nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T11:05:35+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=s1MoYgYXZDo</li> <li>strain : AQ2932</li> <li>timestamp : 2011-11-09T11:05:35+00:00</li> <li>gene : nca-2;nRHO-1;unc-77</li> <li>chromosome : III;I;IV</li> <li>allele : gk5;nzIs29;gk9</li> <li>strain_description : nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-1 (gk9) nca-2 (gk5) nRHO-1 QT309 on food L_2011_11_09__11_05_35___8___3</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 25519</li> </ul>

opencc-by-4.0Oct 2017View details →

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AQ2933 unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-04T11:10:31+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=4K_1TC7jXnk</li> <li>strain : AQ2933</li> <li>timestamp : 2011-11-04T11:10:31+00:00</li> <li>gene : nRHO-1;unc-77</li> <li>chromosome : I;IV</li> <li>allele : nzIs29;gk9</li> <li>strain_description : unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-1 (gk9) nRHO-1 QT309 on food L_2011_11_04__11_10_31___8___5</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 4.9828</li> <li>number of segmented skeletons : 26958</li> </ul>

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AQ2935 unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T12:26:31+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=mMx6GRnmGew</li> <li>strain : AQ2935</li> <li>timestamp : 2011-11-09T12:26:31+00:00</li> <li>gene : nRHO-1;unc-79</li> <li>chromosome : I;III</li> <li>allele : nzIs29;e1068</li> <li>strain_description : unc-79(e1068)III; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-79 (e1068) nRHO-1 QT309 on food R_2011_11_09__12_26_31__7</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 26633</li> </ul>

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AQ2932 nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T12:49:28+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=HAJ42Cw4Mtw</li> <li>strain : AQ2932</li> <li>timestamp : 2011-11-09T12:49:28+00:00</li> <li>gene : nca-2;nRHO-1;unc-77</li> <li>chromosome : III;I;IV</li> <li>allele : gk5;nzIs29;gk9</li> <li>strain_description : nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-1 (gk9) nca-2 (gk5) nRHO-1 QT309 on food R_2011_11_09__12_49_28__8</li> <li>total time (s) : 899.0</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 23390</li> </ul>

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AQ2932 nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-11T12:17:42+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=RybtUUuUBN4</li> <li>strain : AQ2932</li> <li>timestamp : 2011-11-11T12:17:42+00:00</li> <li>gene : nca-2;nRHO-1;unc-77</li> <li>chromosome : III;I;IV</li> <li>allele : gk5;nzIs29;gk9</li> <li>strain_description : nca-2(gk5)III; unc-77(gk9)IV; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-1 (gk9) nca-2 (gk5) nRHO-1 QT309 on food L_2011_11_11__12_17_42__1</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 12474</li> </ul>

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AQ2934 nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-09T10:43:58+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=S0KlPb394qw</li> <li>strain : AQ2934</li> <li>timestamp : 2011-11-09T10:43:58+00:00</li> <li>gene : nca-2;nRHO-1</li> <li>chromosome : III;I</li> <li>allele : gk5;nzIs29</li> <li>strain_description : nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-2 (gk5) nRHO-1 QT309 on food R_2011_11_09__10_43_58__2</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 9016</li> </ul>

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AQ2936 unc-80(e1069)V; nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-11T12:38:11+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=8U8vbzZwzxM</li> <li>strain : AQ2936</li> <li>timestamp : 2011-11-11T12:38:11+00:00</li> <li>gene : nRHO-1;unc-80</li> <li>chromosome : I;V</li> <li>allele : nzIs29;e1069</li> <li>strain_description : unc-80(e1069)V; nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : anticlockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : unc-80 (e1069) nRHO-1 QT309 on food R_2011_11_11__12_38_11__2</li> <li>total time (s) : 899.0</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 19491</li> </ul>

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AQ2934 nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP] | 2011-11-11T13:16:12+00:00

<blockquote> This experiment is part of the C.elegans behavioural database. For more information and the complete collection of experiments visit http://movement.openworm.org </blockquote> <ul> <li>preview link : https://www.youtube.com/watch?v=TKUlrkAkSDU</li> <li>strain : AQ2934</li> <li>timestamp : 2011-11-11T13:16:12+00:00</li> <li>gene : nca-2;nRHO-1</li> <li>chromosome : III;I</li> <li>allele : gk5;nzIs29</li> <li>strain_description : nca-2(gk5);nzIs29[punc-17::rho-1(G14V); punc-122::GFP]</li> <li>sex : hermaphrodite</li> <li>stage : adult</li> <li>ventral_side : clockwise</li> <li>media : NGM agar low peptone</li> <li>arena : <ul> <li>style : petri</li> <li>size : 35</li> <li>orientation : away</li> </ul> </li> <li>food : OP50</li> <li>habituation : 30m wait</li> <li>who : Laura Grundy</li> <li>protocol : Method in E. Yemini et al. doi:10.1038/nmeth.2560. Worm transferred to arena 30 minutes before recording starts.</li> <li>lab : <ul> <li>name : William R Schafer</li> <li>location : MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 0QH, UK</li> </ul> </li> <li>software : <ul> <li>name : tierpsy (https://github.com/ver228/tierpsy-tracker)</li> <li>version : cbfc23eb4f1ac2f29be75ade7a937eed58a5b219</li> <li>featureID : @OMG</li> </ul> </li> <li>base_name : nca-2 (gk5) nRHO-1 QT309 on food L_2011_11_11__13_16_12__4</li> <li>total time (s) : 898.967</li> <li>frames per second : 30.03</li> <li>video micrometers per pixel : 3.9146</li> <li>number of segmented skeletons : 10315</li> </ul>

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ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas

neuroscienceopenDocumentation, web resources, and API references are available online.

Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage

behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.

Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb

electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.

Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl

behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.

Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro

neuroscienceopenPublished datasets are available on demand over the internet.

Last verified 2026-04-29Open record