Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
4,389
datasets available to search
ShareScore release 0.7.1
Dataset results
4,389 results for “Intestine”
Fig. 3 in Molecular identification of Sarcocystis halieti n. sp., Sarcocystis lari and Sarcocystis truncata in the intestine of a white-tailed sea eagle (Haliaeetus albicilla) in Norway
Fig. 3. Phylogenetic tree for members of the Sarcocystidae based on 63 sequences of the partial cox1 gene from 61 taxa and inferred using the neighbourjoining method. Evolutionary distances were computed using the Kimura 2- parameter method. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. The four new sequences from the present study are in boldface.
Fig. 2 in Molecular identification of Sarcocystis halieti n. sp., Sarcocystis lari and Sarcocystis truncata in the intestine of a white-tailed sea eagle (Haliaeetus albicilla) in Norway
Fig. 2. Sporulated thin-walled oocysts of S. halieti and S. lari (based on molecular identification) in wet smears of the intestinal mucosa (frozen/thawed) of the white-tailed sea eagle (Bars = 20 μm). A – Low magnification of numerous oocysts in the mucosa. B – Higher magnification of sporulated oocysts with a thin wall (arrows). C – A fairly large oocyst of the predominant type and a much smaller free sporocyst (ssp), possibly of S. truncata.
Fig. 4 in Molecular identification of Sarcocystis halieti n. sp., Sarcocystis lari and Sarcocystis truncata in the intestine of a white-tailed sea eagle (Haliaeetus albicilla) in Norway
Fig. 4. Phylogenetic tree for members of the Sarcocystidae based on 60 sequences of the complete ITS1 region of 29 taxa and inferred using the neighbour-joining method. Evolutionary distances were computed using the Kimura 2-parameter method. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. The new sequences from the present study are in boldface. Some subtrees formed by two or more sequences of the same species have been collapsed.
Fig. 1 in Molecular identification of Sarcocystis halieti n. sp., Sarcocystis lari and Sarcocystis truncata in the intestine of a white-tailed sea eagle (Haliaeetus albicilla) in Norway
Fig. 1. Cross-sections of two thin-walled sarcocysts in a HE-stained histological section of cardiac muscle from the white-tailed sea eagle (Bar = 20 μm). A – Fairly large profile of a sarcocyst. B – Smaller profile of a sarcocyst containing several roundish cells at the periphery.
Fig. 1 in Diversity of intestinal protozoa and clinical signs associated in wild-caught Phoneutria nigriventer kept in captivity for the anti-arachnid serum production
Fig. 1. Phoneutria nigriventer kept in glass containers with a humidified cotton ball and a cardboard substrate.
Fig. 2. – A and B in Diversity of intestinal protozoa and clinical signs associated in wild-caught Phoneutria nigriventer kept in captivity for the anti-arachnid serum production
Fig. 2. – A and B, Diarrheal stools, without differentiation of solid and liquid portion. C, Normal stools of Phoneutria nigriventer (red arrow). The white arrow indicates the urine portion, white in color due to urate. (For interpretation of the references to color in this figure legend, the reader is referred to the Web version of this article.)
Fig. 1 in Intestinal Ciliates of Brazilian Capybara (Hydrochoerus hydrochaeris L.)
Fig. 1. Intestinal ciliates recorded in Brazilian capybara (Hydrochoerus hydrochaeris). a–j. family Cycloposthiidae (ciliates after Lugol's solution). a. Cycloposthium bursa, b. Cycloposthium caudatum, c. Cycloposthium compressum, d. Cycloposthium cristatum, e. Cycloposthium elongatum, f. Cycloposthium hydrochoeri, g. Cycloposthium incurvum, h. Cycloposthium lenticularis, i. Cycloposthium minutum, j. Monoposthium cynodontum. k–q. family Protocaviellidae (ciliates after silver carbonate impregnation). k. Anacharon gracilis, l. Anacharon lepturus, m. Enterophrya elongata, n. Hydrochoerella intestinalis, o. Ogimotopsis pumila, p. Paracunhamunizia calocoma, q. Uropogon urai. r–s. family Protohalidae (ciliates after silver carbonate impregnation). r. Protohallia nana, s. Protohallia uncinata. t. family Pycnotrichidae (live observation), Muniziella cunhai. ACZ. Adoral ciliary zone, CD. caudalia dorsal, CV. caudalia ventral, CL. caudal lobe, CoV. contractile vacuole, CT. caudal tail, Ma. macronucleus, Sk. skeletal plate, Ve. Vestibulum, VP. vestibular polybrachykinety. Scale bars: 20 µm.
Рис. 6. Поперечные (А–Е, З, И) и продольный (Ж) среЗы череЗ органы пиЩеварительной системы моллюска: А – меШок кристаллического стебелька, Б, В – петли киШки, Г, Д – часть желудка с длинными складками на дорсальной части стенки, Е, З – петли киШки с тифлоЗолем, И – боковаЯ часть тифлоЗолЯ. МасШтабные линейки 300 мкм (Е, З, И), 200 мкм (А, В, Г, Д), 40 мкм (Б). мс – меШок кристаллического стебелька, Кс – кристаллический стебелек, Р – реснички, т – тифлоЗоль, lp – lamina propria, г – гемолимфа. Fig. 6. Transverse (А–Е, З, И) and saggital (Ж) sections of the digestive organs: А – crystalline style sac, Б, В – intestinal limbs, Г, Д – part of the stomach with long plicae on the dorsal wall, Е, З – intestinal limbs with typhlosole, И – lateral part of the typhlosole. Scale bars 300 µm (Е, З, И), 200 µm (А, В, Г, Д), 40 µm (B). мс – style sac, Кс – crystalline style, Р – cilia, т – typhlosole, lp – lamina propria, г – hemolymph. in Nodularia vladivostokensis (Bivalvia: Unionidae) from Razdolnaya River (Primorye, Russia)
Рис. 6. Поперечные (А–Е, З, И) и продольный (Ж) среЗы череЗ органы пиЩеварительной системы моллюска: А – меШок кристаллического стебелька, Б, В – петли киШки, Г, Д – часть желудка с длинными складками на дорсальной части стенки, Е, З – петли киШки с тифлоЗолем, И – боковаЯ часть тифлоЗолЯ. МасШтабные линейки 300 мкм (Е, З, И), 200 мкм (А, В, Г, Д), 40 мкм (Б). мс – меШок кристаллического стебелька, Кс – кристаллический стебелек, Р – реснички, т – тифлоЗоль, lp – lamina propria, г – гемолимфа. Fig. 6. Transverse (А–Е, З, И) and saggital (Ж) sections of the digestive organs: А – crystalline style sac, Б, В – intestinal limbs, Г, Д – part of the stomach with long plicae on the dorsal wall, Е, З – intestinal limbs with typhlosole, И – lateral part of the typhlosole. Scale bars 300 µm (Е, З, И), 200 µm (А, В, Г, Д), 40 µm (B). мс – style sac, Кс – crystalline style, Р – cilia, т – typhlosole, lp – lamina propria, г – hemolymph.
Figs 1–2 in New Intestinal Trematodes From Siganid Fishes Off The Saudi Coast Of The Red Sea
Figs 1–2. Holotypes (whole-mount, ventral view): 1 = Hexangium saudii sp. n. from Siganus rivulatus, Red Sea. 2 = Progyliauchen magnacetabulum sp. n. from Siganus luridus, Red Sea. Scale bar= 500 μm.
Fig. 1 in Histological And Ultrastructural Studies On The Intestine Of Guntea Loach, Lepidocephalichthys Guntea (Cypriniformes, Cobitidae)
Fig. 1. Photomicrographs of various regions of the intestine of Lepidocephalichthys guntea by scanning electron microscopy (SEM) as well as transmission electron microscopy (TEM) and histological sections stained with Delafield's Haematoxylin-Eosin (HE) and Mallory's triple (MT) stain: a — anterior intestine consists of mucosa (M) with numerous finger like projections (V) toward the lumen (L), submucosa (solid arrows), muscularis (ML) and serosa (arrow heads) (MT) ×100; b — middle intestine exhibits blunt projections lined with tightly packed columnar epithelial cells (CEC) and mucous cells (broken arrows). The submucosa (SM) is distinguished from mucosa (M) by basement membrane (BM) and made up of connective tissue, collagen fibres and blood vessels (solid arrows) forming lamina propria (LP). Note the presence of apical top plate (arrow heads) over the mucosal border (HE) ×400; c — higher magnification of middle intestine showing mucosa (M) packed with CEC having conspicuous nuclei (N) and top plate (arrow heads). Broken arrow marks secreted mucin from mucous cell (HE) ×1000; d — luminal surface of the middle intestine provided with prominent microridges (arrow heads) represent the apical surface of CEC. Note the presence of mucous cells (solid arrows) in between CEC and mucin mass (broken arrows) over CEC (SEM) ×3500; e — folds (V) of middle intestine provided with columnar epithelial cells having numerous microvilli (MV) apically and basally located nuclei (N). Note the presence of scattered mucous cells (broken arrows) in between columnar epithelial cells. Solid arrows indicate blood vessels with erythrocytes (TEM) ×570; f — mucosa of middle intestine showing CEC with microvilli (MV) and nucleus (N) connected with neighbouring cells by tight junctions (broken arrows). Cytoplasm contains tuft of mitochondria (solid arrows), lysosome (arrow head) and lipid droplets (LD). Note the presence of MC and BV (TEM) ×2550.
Dataset for "Intra-intestinal analysis of the functional activity of microbiomes and its application to the common marmoset intestine"
<p>Dataset:</p> <p>data1_ExpressionProfile.xlsx: gene expression profile</p> <p>data2_AnnotationProfile.xlsx: gene annotation profile</p>
Intra-intestinal analysis of the functional activity of microbiomes and its application to the common marmoset intestine
<p>Supplementary Table Captions:</p> <p>Table S7. Assignment of genes to unknown gene clusters</p> <p>Table S8. AUC used to determine parameters for covariation analysis by benchmarking</p> <p>Table S9. Linked unknown gene clusters</p> <p>Table S10. Information on common marmosets</p> <p>Table S11. Dual index sequences</p> <p>Table S12. Sequencing statistics</p> <p>Table S13. RIN score of total RNA samples</p> <p>Table S14. Top 20 bacterial species in taxonomic profiling</p> <p>Table S15. Number of genes covered by the nonchimaeric genome in each parameter at the assembly step</p> <p>Table S16. Number of genes covered by the nonchimaeric genome in each parameter at the merge step</p> <p>Table S17. Distance between intestinal sites</p>
The Supplementary Material for the article entitled "Comparative analysis of global transcriptomes in nontyphoidal Salmonella clinical isolates from pediatric patients with and without bacteremia after infecting human intestinal epithelium in vitro"
<p>The Supplementary Material (Additional files 1-5, including Table S1-S4 and Figure S1) for this article.</p> <p> </p> <p><strong>Table S1.</strong> Upregulated genes in Group B versus Groups A and C+D.</p> <p> </p> <p><strong>Table S2.</strong> Downregulated genes in Group B versus Groups A and C+D.</p> <p> </p> <p><strong>Table S3. </strong>The enriched GO terms in Group B versus Groups A and C+D.</p> <p> </p> <p><strong>Table S4. </strong>The enriched KEGG pathways in Group B versus Groups A and C+D.</p> <p> </p> <p><strong>Figure S1. </strong>The enriched GO terms and KEGG pathways in Group B relative to Group A. Bar charts show the enriched GO terms (A) and the enriched KEGG pathways (B) by significance power. Color of bars indicate power of significance and length in x axes of bar indicate number of annotated genes in the particular term of pathway. Cnetplots show the relationship between GO term (C) and KEGG pathways (D). Dot size representing GO terms and KEGG pathways indicates number of significantly changed and its annotated genes. The GO terms or KEGG pathways connected through their common and annotated genes. </p>
Рис. 2. Mukhina elegans (Mukhina, 1981) (самка): А — трофико-сенсорный отΔеΛ теΛа; Б — поΛовая система; В — переΔний конец теΛа; Г — хвост; À — фрагмент кутикуΛы с боковым поΛем бп — боковое поΛе, да — ΔробиΛьный аппарат, в — вуΛьва, зм — заΔняя матка, кб — карΔиаΛьный буΛьбус, кск — кΛетки среΔней кишки, нк — нервное коΛьцо, пм — переΔняя матка, р — ректум, рт — ренетта, с — сперма, ск — среΔняя кишка, сп — семяприемник, ф — фазмиΔы, хс — хейΛостома, эп — экскреторная пора, я — яичник Fig. 2. Mukhina elegans (Mukhina, 1981) (female): A — trophic-sensory part of the body; B — the reproductive system; C — the front end of the body; G — the tail; D — fragment of the cuticle with a side field бп — side field, да — crushing apparatus, в — vulva, зм — posterior uterus, кб — cardial bulb, кск — cells of the mid-intestine, нк — nerve ring, пм — anterior uterus, р — rectum, рт — renetta с — sperm, ск — mid-intestin, сп — seminal receptacle, ф — phasmids, хс — cheilostoma, эп — excretory pore, я — ovary in A New Species Sp. Nov. (Nematoda, Cephalobidae) From Primorsky Region (Russia)
Рис. 2. Mukhina elegans (Mukhina, 1981) (самка): А — трофико-сенсорный отΔеΛ теΛа; Б — поΛовая система; В — переΔний конец теΛа; Г — хвост; À — фрагмент кутикуΛы с боковым поΛем бп — боковое поΛе, да — ΔробиΛьный аппарат, в — вуΛьва, зм — заΔняя матка, кб — карΔиаΛьный буΛьбус, кск — кΛетки среΔней кишки, нк — нервное коΛьцо, пм — переΔняя матка, р — ректум, рт — ренетта, с — сперма, ск — среΔняя кишка, сп — семяприемник, ф — фазмиΔы, хс — хейΛостома, эп — экскреторная пора, я — яичник Fig. 2. Mukhina elegans (Mukhina, 1981) (female): A — trophic-sensory part of the body; B — the reproductive system; C — the front end of the body; G — the tail; D — fragment of the cuticle with a side field бп — side field, да — crushing apparatus, в — vulva, зм — posterior uterus, кб — cardial bulb, кск — cells of the mid-intestine, нк — nerve ring, пм — anterior uterus, р — rectum, рт — renetta с — sperm, ск — mid-intestin, сп — seminal receptacle, ф — phasmids, хс — cheilostoma, эп — excretory pore, я — ovary
Рис. 1. Mukhina orientalis sp. nov. (самка): А — трофико-сенсорный отΔеΛ теΛа; Б — генитаΛьнокауΔаΛьный отΔеΛ теΛа; В — трофико-сенсорный отΔеΛ теΛа второй самки; Г — переΔний конец теΛа; À — хвост второй самки бп — боковое поΛе, да — ΔробиΛьный аппарат, в — вуΛьва, зм — заΔняя матка, кб — карΔиаΛьный буΛьбус, нк — нервное коΛьцо, пм — переΔняя матка, р — ректум, рт — ренетта, ск — среΔняя кишка, скλ — скΛероции кутикуΛы, сп — семяприемник, ф — фазмиΔы, хс — хейΛостома, эп — экскреторная пора, я — яичник Fig. 1. Mukhina orientalis sp. nov. (female): A — trophic-sensory part of the body; Б — genitalcaudal part of the body; В — trophic-sensory part of the body of the second female; Г — front end of the body; À — tail of the second female бп — side field, да — crushing apparatus, в — vulva, зм — posterior uterus, кб — cardial bulb, нк — nerve ring, пм — anterior uterus, р — rectum, ск — mid-intestine, скλ — sclerotic cuticle, сп — seminal receptacle, ф — phasmids, хс — cheilostoma, эп — excretory pore, я — ovary in A New Species Sp. Nov. (Nematoda, Cephalobidae) From Primorsky Region (Russia)
Рис. 1. Mukhina orientalis sp. nov. (самка): А — трофико-сенсорный отΔеΛ теΛа; Б — генитаΛьнокауΔаΛьный отΔеΛ теΛа; В — трофико-сенсорный отΔеΛ теΛа второй самки; Г — переΔний конец теΛа; À — хвост второй самки бп — боковое поΛе, да — ΔробиΛьный аппарат, в — вуΛьва, зм — заΔняя матка, кб — карΔиаΛьный буΛьбус, нк — нервное коΛьцо, пм — переΔняя матка, р — ректум, рт — ренетта, ск — среΔняя кишка, скλ — скΛероции кутикуΛы, сп — семяприемник, ф — фазмиΔы, хс — хейΛостома, эп — экскреторная пора, я — яичник Fig. 1. Mukhina orientalis sp. nov. (female): A — trophic-sensory part of the body; Б — genitalcaudal part of the body; В — trophic-sensory part of the body of the second female; Г — front end of the body; À — tail of the second female бп — side field, да — crushing apparatus, в — vulva, зм — posterior uterus, кб — cardial bulb, нк — nerve ring, пм — anterior uterus, р — rectum, ск — mid-intestine, скλ — sclerotic cuticle, сп — seminal receptacle, ф — phasmids, хс — cheilostoma, эп — excretory pore, я — ovary
Fig. 1 in The First Record of Intestinal Ciliates from the Mountain Zebra (Equus zebra) in South Africa
Fig. 1. (A–O) Endosymbiotic ciliates from mountain zebra of South Africa: A – Alloiozona trizona, B – Holophryoides macrotricha, C – Blepharosphaera ceratotherii, D – Holophryoides ovalis, E – Blepharocorys angusta m. triangulata, F – Blepharocorys angusta m. ovata, G – Blepharoprosthium pireum, H – Blepharoconus sp., I – Bundleia postciliata, J – Bundleia piriformis, K – Bundleia inflata, L – Bundleia benbrooki. M – Spirodinium nanum, N – Triplumaria sp. "A", O – Triplumaria sp. "B". Differential interference contrast, N, O – reconstruction from 3 images. Scale bars: 10 µm.
Fig. 6 in Toxocara canis-induced changes in host intestinal microbial communities
Fig. 6 Correlation networks of the microbiome. a Heatmap of correlation coefficients in the CI, II and Tc groups. b Network map between species. Each node in the graph represents a species, with the color of the dot representing the highest relative abundance observed within these subgroups.The size of the dot corresponds to the average relative abundance of the species, with larger dots indicating higher abundance.The species are connected to each other through straight lines, with the color pink indicating a positive correlation and blue indicating a negative correlation. The thickness of the lines reflects the magnitude of the correlation, with only correlation coefficients> 0.2 between species being displayed
Fig. 3 in Toxocara canis-induced changes in host intestinal microbial communities
Fig. 3 Comparison of beta diversity indicator of flora among CI, II and Tc groups. a Unweighted uniFrac analysis, b Weighted uniFrac analysis, c Partial least-squares discriminant analysis. CI, Intestine samples of dogs in control group; II, intestine samples of dogs in infected group; plsda, partial least-squares discriminant analysis; Tc, Toxocara canis samples
Fig. 5 in Toxocara canis-induced changes in host intestinal microbial communities
Fig. 5 Differences in species composition of flora in the CI, II and Tc group at the genus level. The horizontal coordinate is the sample name and the vertical coordinate is the relative abundance of the species annotated. Species not annotated at this taxonomic level and whose abundance was <0.5% of the sample were combined as "Others" (a). b The top 10 species at the genus level in the CI, II and TI group. Note that the significance of the test of difference was marked with an asterisk at the top of the bar graph if available. CI, Intestine samples of dogs in control group; II, intestine samples of dogs in infected group; Tc, Toxocara canis samples
Fig. 2 in Toxocara canis-induced changes in host intestinal microbial communities
Fig. 2 Boxplots showing comparisons of the alpha diversity indicators of flora among the three experimental groups. a Coverage index, b Chao index, c Shannon index, d Ace index. CI, Intestine samples of dogs in control group; II, intestine samples of dogs in infected group; Tc, Toxocara canis samples
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.