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43 results for “Lagopus lagopus”
Fig. 2 in Distribution of Eimeria uekii and Eimeria raichoi in cage protection environments for the conservation of Japanese rock ptarmigans (Lagopus muta japonica) in the Japanese Alps
Fig. 2. Internal and external appearance of a shelter cage used for cage protection of Japanese rock ptarmigan broods on Mt. Norikuradake (A and B, respectively) with location numbers to indicate the soil sample collection positions within the cages (C). OPG values for the soil samples within the cages at Mt. Norikuradake (D; E. uekii and E; E. raichoi) and Mt. Komagatake (F; E. uekii and G; E. raichoi).
Fig. 1 in Molecular detection and genotypes of Enterocytozoon bieneusi in farmed mink (Neovison vison), blue foxes (Alopex lagopus), and raccoon dogs (Nyctereutes procyonoides) in Xinjiang, China
Fig. 1. Phylogenetic relationships of the E. bieneusi genotypes. The relationships were inferred using NJ analysis of the ITS rRNA gene and the values generated greater than 50% are shown beside the nodes. Genotypes with hollow circles and filled circles are known and novel genotypes identified in this study, respectively.
Data from: The role of parasite-driven selection in shaping landscape genomic structure in red grouse (Lagopus lagopus scotica)
Landscape genomics promises to provide novel insights into how neutral and adaptive processes shape genome-wide variation within and among populations. However, there has been little emphasis on examining whether individual-based phenotype-genotype relationships derived from approaches such as genome-wide association (GWAS) manifest themselves as a population-level signature of selection in a landscape context. The two may prove irreconcilable as individual-level patterns may become diluted by high levels of gene flow and complex phenotypic or environmental heterogeneity. We illustrate this issue with a case study that examines the role of the highly prevalent gastrointestinal nematode Trichostrongylus tenuis in shaping genomic signatures of selection in red grouse (Lagopus lagopus scotica). Individual-level GWAS involving 384 SNPs has previously identified five SNPs that explain variation in T. tenuis burden. Here, we examine whether these same SNPs display population-level relationships between T. tenuis burden and genetic structure across a small-scale landscape of 21 sites with heterogeneous parasite pressure. Moreover, we identify adaptive SNPs showing signatures of directional selection using FST outlier analysis and relate population- and individual-level patterns of multi-locus neutral and adaptive genetic structure to T. tenuis burden. The five candidate SNPs for parasite-driven selection were neither associated with T. tenuis burden on a population level, nor under directional selection. Similarly, there was no evidence of parasite-driven selection in SNPs identified as FST outliers. We discuss these results in the context of red grouse ecology and highlight the broader consequences for the utility of landscape genomics approaches for identifying signatures of selection.
Subspecies and Distribution. A. l. lagopus Linnaeus, 1758 — most of the circumpolar range, in all Arctic tundra habitats. A. l. beringensis Merriam, 1902 — Russia (Commander Is). A. l. fuliginosus Bechstein, 1799 — Iceland, Greenland, Svalbard. A.l. pribilofensis Merriam, 1902 — Alaska (Pribilof Is). in Canidae
Subspecies and Distribution. A. l. lagopus Linnaeus, 1758 — most of the circumpolar range, in all Arctic tundra habitats. A. l. beringensis Merriam, 1902 — Russia (Commander Is). A. l. fuliginosus Bechstein, 1799 — Iceland, Greenland, Svalbard. A.l. pribilofensis Merriam, 1902 — Alaska (Pribilof Is).
On following pages: 24. Arctic Fox (Alopex lagopus); 25. Swift Fox (Vulpes velox); 26. Kit Fox (Vulpes macrotis). in Canidae
On following pages: 24. Arctic Fox (Alopex lagopus); 25. Swift Fox (Vulpes velox); 26. Kit Fox (Vulpes macrotis).
Subspecies and Distribution. pos sagitta Pallas, 1773 — S Russia (Altai Krai) and right bank of Irtysh River in Kazakhstan (Pavlodar and East Kazakhstan regions). D.s.aksuensisWangSung,1964—NWChina(NTarimBasininXinjiang). D.s.austrouralensisShenbrot,1991—NWKazakhstan(WestKazakhstan,Atyrau,andAktoberegionsbetweenUralandEmbarivers). D.s.bulganensisShenbrot,1991—EKazakhstan(ELakeZaysaninEastKazakhstanRegion),NWChina(DzungarianBasininXinjiang),andMongolia(SKhovdandSWGovi-Altai). D.s.deasyiBarret-Hamilton,1900—NWChina(STarimBasininXinjiangandS&WQaidamBasininQinghai). D. s. fuscocanus Wang Sung, 1964 — W China (S foothills of E Tian Shan in Xinjiang). D. s. halli Sowerby, 1920 — China (NE Inner Mongolia [= Nei Mongol], SW Heilongjiang, NWJilin, and N Liaoning) and SE Mongolia (Stikhbaatar). D. s. innae Ognev, 1930 — S Russia (Astrakhan Region E of Volga River) and NW Kazakhstan (West Kazakhstan and Atyrau regions W of Ural River). D. s. lagopus Lichtenstein, 1823 — WC Kazakhstan (E of Emba and N of Syrdarya rivers). D. s. megacranius Shenbrot, 1991 — SE Kazakhstan (Moinkum Sands in Jambyl Region). D. s. nogai Satunin, 1907 — S European Russia (Volgograd and Astrakhan regions E of Volga River, Kalmykia, and Dagestan). D. s. sowerbyi Thomas, 1908 — N China (NE Xinjiang, N Qaidam Basin in Qinghai, Gansu, SW Inner Mongolia, N Ningxia, and N Shaanxi) and Mongolia. D. s. turanicus Shenbrot, 1991 — SW Kazakhstan (S Kyzylorda S of Syrdarya River and Mangystau regions), Uzbekistan, and Turkmenistan; it probably occurs in adjacent W Afghanistan. D. s. ubsanensis Bannikov, 1947 — NW Mongolia (N Uvs) and adjacent Russia (extreme S Tuva). D. s. usuni Shenbrot, 1991 — SE Kazakhstan (Almaty Region); it probably occurs in adjacent China (sands of Ili Valley of W Xinjiang). D. s. zaissanensis Selevin, 1934 — E Kazakhstan (NW Lake Zaysan Basin on the left bank of Irtysh River). Isolated population in N Iran (Turan Desert in E Semnan Province) may belong to turanicus or correspond to a yet undescribed subspecies. in Dipodidae
Subspecies and Distribution. pos sagitta Pallas, 1773 — S Russia (Altai Krai) and right bank of Irtysh River in Kazakhstan (Pavlodar and East Kazakhstan regions). D.s.aksuensisWangSung,1964—NWChina(NTarimBasininXinjiang). D.s.austrouralensisShenbrot,1991—NWKazakhstan(WestKazakhstan,Atyrau,andAktoberegionsbetweenUralandEmbarivers). D.s.bulganensisShenbrot,1991—EKazakhstan(ELakeZaysaninEastKazakhstanRegion),NWChina(DzungarianBasininXinjiang),andMongolia(SKhovdandSWGovi-Altai). D.s.deasyiBarret-Hamilton,1900—NWChina(STarimBasininXinjiangandS&WQaidamBasininQinghai). D. s. fuscocanus Wang Sung, 1964 — W China (S foothills of E Tian Shan in Xinjiang). D. s. halli Sowerby, 1920 — China (NE Inner Mongolia [= Nei Mongol], SW Heilongjiang, NWJilin, and N Liaoning) and SE Mongolia (Stikhbaatar). D. s. innae Ognev, 1930 — S Russia (Astrakhan Region E of Volga River) and NW Kazakhstan (West Kazakhstan and Atyrau regions W of Ural River). D. s. lagopus Lichtenstein, 1823 — WC Kazakhstan (E of Emba and N of Syrdarya rivers). D. s. megacranius Shenbrot, 1991 — SE Kazakhstan (Moinkum Sands in Jambyl Region). D. s. nogai Satunin, 1907 — S European Russia (Volgograd and Astrakhan regions E of Volga River, Kalmykia, and Dagestan). D. s. sowerbyi Thomas, 1908 — N China (NE Xinjiang, N Qaidam Basin in Qinghai, Gansu, SW Inner Mongolia, N Ningxia, and N Shaanxi) and Mongolia. D. s. turanicus Shenbrot, 1991 — SW Kazakhstan (S Kyzylorda S of Syrdarya River and Mangystau regions), Uzbekistan, and Turkmenistan; it probably occurs in adjacent W Afghanistan. D. s. ubsanensis Bannikov, 1947 — NW Mongolia (N Uvs) and adjacent Russia (extreme S Tuva). D. s. usuni Shenbrot, 1991 — SE Kazakhstan (Almaty Region); it probably occurs in adjacent China (sands of Ili Valley of W Xinjiang). D. s. zaissanensis Selevin, 1934 — E Kazakhstan (NW Lake Zaysan Basin on the left bank of Irtysh River). Isolated population in N Iran (Turan Desert in E Semnan Province) may belong to turanicus or correspond to a yet undescribed subspecies.
Supplementary material 4 from: Dhar MK, Kour G, Kaul S (2017) B chromosome in Plantago lagopus Linnaeus, 1753 shows preferential transmission and accumulation through unusual processes. Comparative Cytogenetics 11(2): 375-392. https://doi.org/10.3897/compcytogen.v11i2.11779
Figure S3 : Explanation note: S3a, b: SSR profile of 1B mother and its selfed progeny plants. M = 100bp ladder. Lane1: 1B mother plant. Lane 2: progeny plant with 2n = 26 chromosomes. Lanes 3- 26: 1B chromosome containing progeny plants. S3c, d: SSR profile of 2B and its selfed progeny plants. M = 100bp ladder. Lane1: 2B mother plant. Lane 2: progeny plant with 2n = 28 chromosomes. Lanes 3- 14: 2B chromosome containing progeny plants. Note exactly similar band pattern of mother and higher chromosome progeny plants.
Supplementary material 3 from: Dhar MK, Kour G, Kaul S (2017) B chromosome in Plantago lagopus Linnaeus, 1753 shows preferential transmission and accumulation through unusual processes. Comparative Cytogenetics 11(2): 375-392. https://doi.org/10.3897/compcytogen.v11i2.11779
Figure S2 : Explanation note: S2a: SSAP profile of 1B mother plant and progeny plants. M = 100bp ladder. Lane1: 1B mother plant. Lane 2: progeny plant with 2n = 26 chromosomes. Lanes 3-8: 1B progeny plants. S2b: SSAP profile of 2B mother plant and progeny plants. M = 100bp ladder. Lane 1: 2B mother plant. Lane 2: progeny plant with 2n = 28 chromosomes. Lanes 3-8: 2B progeny plants.
Supplementary material 2 from: Dhar MK, Kour G, Kaul S (2017) B chromosome in Plantago lagopus Linnaeus, 1753 shows preferential transmission and accumulation through unusual processes. Comparative Cytogenetics 11(2): 375-392. https://doi.org/10.3897/compcytogen.v11i2.11779
Figure S1 : Explanation note: SSCP profile of 5S rDNA amplified from various plants. M = 100bp ladder. Lane1: 1B mother plant. Lane 2: progeny plant with 2n = 26 chromosomes. Lanes 3, 4: progeny plants (1B). Lane 5: 2B mother plant. Lane 6: progeny plant with 2n = 28 chromosomes. Lanes 7-9: progeny plants (2B). The band pattern of higher chromosome plants completely matches that of the mother plants as indicated by arrows.
Data in Brief: Twig selection on mountain birch Betula pubescens by winter-feeding willow grouse Lagopus lagopus in a subarctic forest
<p class="MsoNormal"></p> <p class="MsoNormal">In a subarctic forest at Kvaløya, northern Norway willow grouse (<em>Lagopus lagopus</em>) fed at snow level by clipping bits of twigs from mountain birch (<em>Betula pubescens</em>) during winter. Birch has two types of twigs ending in a terminal bud: long twigs with a smooth bark, and short twigs with rings of thicker bark. The grouse selected ringed twigs above smooth twigs despite a surplus of smooth twigs in the forest. Ringed twigs had more bark cm<sup>-1</sup> of twig length and a higher relative bark/wood ratio than smooth twigs. Smooth twigs had growth nodes that increased in diameter inwards from the tip. Because of the non-linear relation between the area and the circumference of a circle, the bark/wood ratio decreased for each node. Although being able to clip much thicker twigs, 90 % of smooth twigs clipped by grouse were <span>≤</span> 2 mm in diameter. It is concluded that willow grouse fed optimally on birch in winter by selecting twigs to minimize fibrous wood intake.</p>
Data from: The role of parasite-driven selection in shaping landscape genomic structure in red grouse (Lagopus lagopus scotica)
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Data from: Fine-scale population epigenetic structure in relation to gastro-intestinal parasite load in red grouse (Lagopus lagopus scotica)
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Low persistence of genetic rescue across generations in the Arctic fox (Vulpes lagopus)
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Data from: Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
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Data in Brief: Twig selection on mountain birch Betula pubescens by winter-feeding willow grouse Lagopus lagopus in a subarctic forest
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Plantago lagopus Pursh (BR0000024653046)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Plantago lagopus Pursh (BR0000014460227)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Plantago lagopus Pursh (BR0000011224600)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Plantago lagopus Pursh (BR0000014460531)
Belgium Herbarium image of <a href="https://www.plantentuinmeise.be">Meise Botanic Garden</a>.
Supplementary material 1 from: Dhar MK, Kour G, Kaul S (2017) B chromosome in Plantago lagopus Linnaeus, 1753 shows preferential transmission and accumulation through unusual processes. Comparative Cytogenetics 11(2): 375-392. https://doi.org/10.3897/compcytogen.v11i2.11779
Tables S1 and S2 : Explanation note: Table S1: Sequences of primers used for SSR analysis.
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