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84 results for “Medaka”
Female preference for colour-enhanced males: a test of the sensory bias model in medaka, a drab fish
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Comparative Transcriptomic Analysis of Adult Medaka Tissues Sampled after Adaptation to a Space Environment
To understand how humans adapt to space environments many experiments can be conducted on astronauts while they work aboard the Space Shuttle or the International Space Station (ISS). We also need animal experiments that can apply to human models and help prevent or solve the physical issues we face in space travel. The medaka is a suitable model fish for studying space adaptation because in the second International Microgravity Laboratory mission in 1994 adult fish mated successfully in space during 15 days of flight. In 2012 another space experiment Medaka Osteoclast was performed. Male and female fish (6 weeks old at launching) were maintained in the Aquatic Habitat system for 2 months in the ISS. The RNA-seq analysis of tissues from these fish will revealed tissue-specific responsiveness and common stress responses during space adaptation.
Medaka Osteoclast
During space flight bone mineral density is decreased by the influence of osteoclast activation which molecular mechanism is expectantly investigated. In the study of medaka bone development we investigated the system of vertebra formation and firstly identified the presence of osteoclasts in medaka. Moreover osteoclast rsorbing activity was affected by hypergravity indicating the possibility that we can investigate the effect of microgravity on osteoclasts in space. To find this effect we examine the alteration of osteoclast activity under microgravity with the histological analysis or the expression analysis by RNA in-situ hybridization. Furthermore since we have succeeded the establishment of the medaka osteoclast-specific transgenic lines we perform the in-vivo imaging analyses for gene expression and cell mobility. Finally to examine the gravity sensing system we employ tooth and bone as the high density organs which are highly sensitive to gravity and perform the histological analysis and the gene expression analysis of such gravity-sensitive tissues at surrounding pharyngeal teeth and supporting bone.
Characterization of hormone-producing cell types in the medaka pituitary gland using single-cell RNA-seq
GEO Series GSE162787. Oryzias latipes. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic characterization of transcription activator-like effector nucleases-induced XY dmy- sex reversal female medaka (Oryzias latipes)
GEO Series GSE62700. Oryzias latipes. 3 samples. Type: Expression profiling by high throughput sequencing.
Global transcriptional response in Japanese medaka larvae following embryonic exposure to TCDD
GEO Series GSE87168. Oryzias latipes. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq and small RNA-seq covering three genotypes of medaka gonad at three phases of gonadal differentiation [small RNA-seq]
GEO Series GSE288572. Oryzias latipes. 27 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptomic profiles of Japanese medaka (Oryzias latipes) in response to alkalinity stress
GEO Series GSE27298. Oryzias latipes. 6 samples. Type: Expression profiling by array.
RNA-seq and small RNA-seq covering three genotypes of medaka gonad at three phases of gonadal differentiation [RNA-seq]
GEO Series GSE288571. Oryzias latipes. 27 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional analysis reveals the progression of PCOS to ovarian cancer in medaka fish ancestrally exposed to BPA
GEO Series GSE226322. Oryzias latipes. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysts of a growth domain and a differentiated domain of the medaka gill.
GEO Series GSE130939. Oryzias latipes. 6 samples. Type: Expression profiling by high throughput sequencing.
Structural basis of epigenetic protection of mouse lymphoid progenitor cells by Dnmt1 (Medaka)
GEO Series GSE98646. Oryzias latipes. 6 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression of whole brain between DMSO- and celastrol-treated medaka
GEO Series GSE145971. Oryzias latipes. 8 samples. Type: Expression profiling by array.
Transcriptome profiling of medaka timecourse embryonic samples and adult tissues samples.
GEO Series GSE136018. Oryzias latipes. 24 samples. Type: Expression profiling by high throughput sequencing.
Evaluation of the physiology of medaka for standardized toxicity tests of chemicals
GEO Series GSE15380. Oryzias latipes. 88 samples. Type: Expression profiling by array.
Transcriptome profile of wildtype and SEDL knockdown Medaka embryos and Human ARPE-19 cells
GEO Series GSE143540. Oryzias latipes; Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profile of Stage 40 Oryzias latipes (Medaka) embryos
GEO Series GSE143538. Oryzias latipes. 6 samples. Type: Expression profiling by high throughput sequencing.
Gene expression changes in collagen10a1 (col10a1) medaka mutants
GEO Series GSE233581. Oryzias latipes. 5 samples. Type: Expression profiling by high throughput sequencing.
Regulation of cholesterogenic gene expression in Japanese medaka (Oryzias latipes) exposed to 17β-trenbolone
GEO Series GSE35908. Oryzias latipes. 22 samples. Type: Expression profiling by array.
Transcriptome analysis of medaka germ cells and gonadal somatic cells during the gonadal sex differentiation.
GEO Series GSE59521. Oryzias latipes. 24 samples. Type: Expression profiling by array.
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Allen Brain Atlas
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.