Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
53
datasets available to search
ShareScore release 0.7.1
Dataset results
53 results for “Mycology”
Linked collectors and determiners for: Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Mycological Herbarium.
Natural history specimen data linked to collectors and determiners held within, "Estonian University of Life Sciences Institute of Agricultural and Environmental Sciences Mycological Herbarium". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/1f917113-dd55-4000-9f80-6266fab1af03">https://bionomia.net/dataset/1f917113-dd55-4000-9f80-6266fab1af03</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/1f917113-dd55-4000-9f80-6266fab1af03">https://gbif.org/dataset/1f917113-dd55-4000-9f80-6266fab1af03</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Estonian Museum of Natural History Department of Mycology.
Natural history specimen data linked to collectors and determiners held within, "Estonian Museum of Natural History Department of Mycology". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/b157fe6d-31fc-45d9-8f85-c952428af499">https://bionomia.net/dataset/b157fe6d-31fc-45d9-8f85-c952428af499</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/b157fe6d-31fc-45d9-8f85-c952428af499">https://gbif.org/dataset/b157fe6d-31fc-45d9-8f85-c952428af499</a>. Formatted as a Frictionless Data package.
Bibliography of mycological publications for the Northwestern Siberia (Tuymen region s.l.)
Open the record for dataset details and reuse information.
Mycological catalog of the Balearic Islands
<p>Dataset extracted from http://bolets.uib.es/cas/. Original data from the book 'Els bolets de les Balears', Carles C, Josep L. S. Ed. Micobalear, C.B. (2006). Digitalized by Museu Balear de Ciències Naturals and Universitat de les Illes Balears with the funding of Obra Social Sa Nostra Caixa de Balears.</p> <p>The following attributes are found in the dataset:</p> <ul> <li> <p><strong>scientific_name:</strong> Official scientific name.</p> </li> <li> <p><strong>family:</strong> Taxonomic family.</p> </li> <li> <p><strong>genre:</strong> Taxonomic genre.</p> </li> <li> <p><strong>alternative_scientific_names:</strong> Alternative scientific names following different nomenclatures.</p> </li> <li> <p><strong>ca_common_name:</strong> Popular names in catalan.</p> </li> <li> <p><strong>es_common_name:</strong> Popular names in spanish.</p> </li> <li> <p><strong>description:</strong> Detailed desciption.</p> </li> <li> <p><strong>additional_info:</strong> Additional notes.</p> </li> <li> <p><strong>islands:</strong> Islands where the mushroom is located.</p> </li> <li> <p><strong>habitat:</strong> Habitats.</p> </li> <li> <p><strong>edibility:</strong> Edibility.</p> </li> </ul>
FIGURE. RAxML tree based on a combined dataset of partial LSU and ITS sequence analyses. Bootstrap support values for ML equal to or greater than 60 %, Bayesian posterior probabilities (BYPP) equal to or greater than 0.95 are shown as ML/ BYPP above the nodes. New isolates are in red bold. The tree is rooted to Conioscypha lignicola and Conioschypha minutispora (FMR11245) and Conioscyphascus varius. The scale bar represents the expected number of nucleotide substitutions per site. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. RAxML tree based on a combined dataset of partial LSU and ITS sequence analyses. Bootstrap support values for ML equal to or greater than 60 %, Bayesian posterior probabilities (BYPP) equal to or greater than 0.95 are shown as ML/ BYPP above the nodes. New isolates are in red bold. The tree is rooted to Conioscypha lignicola and Conioschypha minutispora (FMR11245) and Conioscyphascus varius. The scale bar represents the expected number of nucleotide substitutions per site.
FIGURE. Number of species introduced from different provinces in China over the last decade (2010–2020). in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Number of species introduced from different provinces in China over the last decade (2010–2020).
FIGURE. Phylogram of Panus generated from Maximum likelihood analysis of ITS sequence data. Lentinus crinitus (MK408650) was selected as the outgroup taxon. Maximum likelihood bootstrap values greater than 60% are indicated above the nodes. The new record Panus similis (HKAS 121668) is in black bold. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Phylogram of Panus generated from Maximum likelihood analysis of ITS sequence data. Lentinus crinitus (MK408650) was selected as the outgroup taxon. Maximum likelihood bootstrap values greater than 60% are indicated above the nodes. The new record Panus similis (HKAS 121668) is in black bold.
FIGURE. Tolypocladium cucullae (HKAS 55588, holotype). a, b. Material of Tolypocladium cucullae. c. Ascostromata. d. Fertile head of ascostroma. e. Vertical section of stroma. f. Peridium. g–j. Asci. k. Apical cap of asci. l–o. Secondary ascospores. Scale Bars: d = 5 mm, e = 100 µm, f = 50 µm, g–j = 200 µm, k, l–o = 20 µm. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Tolypocladium cucullae (HKAS 55588, holotype). a, b. Material of Tolypocladium cucullae. c. Ascostromata. d. Fertile head of ascostroma. e. Vertical section of stroma. f. Peridium. g–j. Asci. k. Apical cap of asci. l–o. Secondary ascospores. Scale Bars: d = 5 mm, e = 100 µm, f = 50 µm, g–j = 200 µm, k, l–o = 20 µm.
FIGURE. Roussoella pseudohysterioides (GMB0009). a–d. Ascostromata developing on bamboo culm. e, f. Vertical sections of ascostromata. g–j. Asci containing eight ascospores. k. Fragment of ascostromata in KOH without stromatal pigments. l–m. Ascus apex in Melzer's reagent. n–r. Dark brown ascospores. Scale bars: j–r = 10 μm. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Roussoella pseudohysterioides (GMB0009). a–d. Ascostromata developing on bamboo culm. e, f. Vertical sections of ascostromata. g–j. Asci containing eight ascospores. k. Fragment of ascostromata in KOH without stromatal pigments. l–m. Ascus apex in Melzer's reagent. n–r. Dark brown ascospores. Scale bars: j–r = 10 μm.
FIGURE. Metarhizium guizhouense (GMB0010) (new host record). a, b. Fungus on stick insects (Phasmatodea) c, d. Green mycelium and sporulating conidiophores covered on the surface of inscect. e, f, g. Conidiophores h, i. Conidia on insect host. Scale bars: a, b = 5 mm, c = 2 mm, d = 500 μm, j–r = 10 μm, e–i = 5μm in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Metarhizium guizhouense (GMB0010) (new host record). a, b. Fungus on stick insects (Phasmatodea) c, d. Green mycelium and sporulating conidiophores covered on the surface of inscect. e, f, g. Conidiophores h, i. Conidia on insect host. Scale bars: a, b = 5 mm, c = 2 mm, d = 500 μm, j–r = 10 μm, e–i = 5μm
FIGURE. Helminthosporium velutinum (HKAS 107064, new host record and a new record from Guizhou Province) a–c. Colony on the substrate. d. Conidiophores. e–g. Conidiophore and conidia. h–l. Conidia. m. Germinating conidium. n, o. Culture on PDA from. n. above o. below after 4 weeks. Scale bars: d = 100 μm, e–g =50 μm, h–m = 20 μm. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Helminthosporium velutinum (HKAS 107064, new host record and a new record from Guizhou Province) a–c. Colony on the substrate. d. Conidiophores. e–g. Conidiophore and conidia. h–l. Conidia. m. Germinating conidium. n, o. Culture on PDA from. n. above o. below after 4 weeks. Scale bars: d = 100 μm, e–g =50 μm, h–m = 20 μm.
FIGURE. Immersidiscosia eucalypti (IFRD 500-20) a. Host leaves. b. Specimen with conidiomata. c. Conidiomata. d. Section of conidiomata. e. Peridium of conidiomata. f–j. Conidia. Scale bars: b = 300 µm, c, e = 100 µm, d = 200 µm, f–j = 10 µm. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Immersidiscosia eucalypti (IFRD 500-20) a. Host leaves. b. Specimen with conidiomata. c. Conidiomata. d. Section of conidiomata. e. Peridium of conidiomata. f–j. Conidia. Scale bars: b = 300 µm, c, e = 100 µm, d = 200 µm, f–j = 10 µm.
FIGURE. Myrmecridium schulzeri (IFRD500–012) a, b. Colonies on natural substrate. c–e. Conidiophores with conidia. f, g. Conidiogenous cells with conidia. h–l. Conidia. m Germinating conidia on PDA. n, o. Culture on PDA, n. from front, o. from reverse. Scale bars: c–e, h = 20 μm, m = 10 μm, f, g = 5 μm, i–l = 2 μm. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Myrmecridium schulzeri (IFRD500–012) a, b. Colonies on natural substrate. c–e. Conidiophores with conidia. f, g. Conidiogenous cells with conidia. h–l. Conidia. m Germinating conidia on PDA. n, o. Culture on PDA, n. from front, o. from reverse. Scale bars: c–e, h = 20 μm, m = 10 μm, f, g = 5 μm, i–l = 2 μm.
FIGURE 5 in Three challenges to contemporaneous taxonomy from a licheno-mycological perspective
FIGURE 5. Proportional distribution of major topics among 3,403 publications on Latin American lichens from 1750 to present (analysed from the Recent Literature on Lichens database, RLL: http://nhm2.uio.no/botanisk/lav/RLL/RLL. HTM). Only 7% of these are dealing with potential revenue generation; yet, most of the other 93% are burdened with the same obligations regarding the Nagoya Protocol, as long as they include molecular phylogenetic or chemotaxonomic approaches.
FIGURE 3 in Three challenges to contemporaneous taxonomy from a licheno-mycological perspective
FIGURE 3. Global distribution of the 200 most prolific fungal taxonomists, responsable for nearly half of all approximately 360,000 species names described (Index Fungorum 2020; cut-off point: December 2017). Orange: historic and recent authors that have passed away (75%); violet: authors still alive and active (25%). The area size of the circles is proportional to the species named by these authors. Note the overall heavily unbalanced distribution of both described species and authors towards Europe and North America but the more balanced situation when only taking into account active taxonomists. For detailed information, see Table 1). The base map was modified from Wikipedia [https://upload.wikimedia.org/wikipedia/commons/e/e8/World_blank_ map_countries.PNG].
FIGURE 2 in Three challenges to contemporaneous taxonomy from a licheno-mycological perspective
FIGURE 2. Historic, current and future proposed accumulation of catalogued fungal species assuming a much increase annual rate by a dedicated workforce of 300 full-time taxonomists, envisioning a completion of an additional 3 million species by 2060.
FIGURE 1 in Three challenges to contemporaneous taxonomy from a licheno-mycological perspective
FIGURE 1. Estimated time to complete the inventory of fungal species, given a current maximum rate of 2,000 new species per year and based on different global richness predictions: (1) May (2000); (2) Mora et al. (2011); (3) Schmit & Mueller (2006); (4) Hammond (1992); (5) Rossman (1994); (6) Mora et al. 2011 (adjusted according to Hawksworth & Lücking 2018); (7) Hawksworth (1991, 2001); (8) Pascoe (1990); (9) Hawksworth (2012) and Hawksworth & Lücking (2018); (10) Hawksworth & Rossman (1997) (in Hawksworth 2001); (11) O'Brien et al. (2005); (12) Cannon (1997); (13) Wu et al. (2019).
Linked collectors and determiners for: Mycology herbarium, UiB.
Natural history specimen data linked to collectors and determiners held within, "Mycology herbarium, UiB". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/41690f55-ccbe-48ba-8238-01173f657072">https://bionomia.net/dataset/41690f55-ccbe-48ba-8238-01173f657072</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/41690f55-ccbe-48ba-8238-01173f657072">https://gbif.org/dataset/41690f55-ccbe-48ba-8238-01173f657072</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Canadian National Mycological Herbarium.
Natural history specimen data linked to collectors and determiners held within, "Canadian National Mycological Herbarium". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/695cef75-b65f-4776-b2ed-74565eebb16e">https://bionomia.net/dataset/695cef75-b65f-4776-b2ed-74565eebb16e</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/695cef75-b65f-4776-b2ed-74565eebb16e">https://gbif.org/dataset/695cef75-b65f-4776-b2ed-74565eebb16e</a>. Formatted as a Frictionless Data package.
FIGURE. Basidiocarps of Panus similis (HKAS 121668) in the field. in Yunnan-Guizhou Plateau: a mycological hotspot
FIGURE. Basidiocarps of Panus similis (HKAS 121668) in the field.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.