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datasets available to search
ShareScore release 0.7.1
Dataset results
35 results for “Peptide identification”
The identification of a SARs-CoV2 S1 protein derived peptide with super-antigen-like stimulatory properties on T-cells
GEO Series GSE281135. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
A Prospective Study to Assess the Screening Value of N-terminal Pro-B-type Natriuretic Peptide (NT-proBNP) for the Identification of Patients That Benefit From Additional Cardiac Testing Prior to Vasc
ClinicalTrials.gov study NCT00519961. IPD Sharing: Not stated. Countries: 2. Publications: 0.
Identification of Potential Biomarkers of Response to Peptide Immunotherapy for Ragweed Allergy
ClinicalTrials.gov study NCT01361412. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Truncated and Extended Forms of Amyloid Beta Peptides in Alzheimer's Disease: Genesis, Toxicity and Identification as Biological Markers
ClinicalTrials.gov study NCT01128725. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Identification of natriuretic peptide receptor A (NPR-A) expression signatures in podocytes in vivo reveals baseline control of protective pathways including Protein S
GEO Series GSE249221. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Identification of endogenous small peptides involved in rice immunity through transcriptomics- and proteomics-based screening
GEO Series GSE252768. Oryza sativa Japonica Group. 21 samples. Type: Expression profiling by high throughput sequencing.
Proteogenomics-based identification of the repertoire of human MHC class I-associated peptides
GEO Series GSE67174. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Identification of endogenous small peptides involved in rice immunity through transcriptomics- and proteomics-based screening
GEO Series GSE252769. Oryza sativa Japonica Group. 48 samples. Type: Expression profiling by high throughput sequencing.
Identification of endogenous small peptides involved in rice immunity through transcriptomics- and proteomics-based screening
GEO Series GSE252767. Oryza sativa Japonica Group. 27 samples. Type: Expression profiling by high throughput sequencing.
Identification of a DAMP receptor and its cognate peptide ligand in sweet potato (Ipomoea batatas)
GEO Series GSE227409. Ipomoea batatas. 12 samples. Type: Expression profiling by high throughput sequencing.
Identification of the target gene expression of peptide SK56 in human macrophage cells during pyroptosis
GEO Series GSE240889. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Peptide Driven Identification of TCRs (PDI-TCR) reveals dynamics and phenotypes of CD4 T cells in tuberculosis
GEO Series GSE293807. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing; Other.
Identification of Vaccinia Virus HLA Class I Peptides Presented by the Immune System
GEO Series GSE10549. Homo sapiens; Orthopoxvirus vaccinia; Bos taurus. 3 samples. Type: Protein profiling by Mass Spec.
Raman-derived identification tags for mutation screening in amyloid beta peptides
<p>Supplementary information for article.</p> <ol> <li>Raman dataset for 473 nm, 633 nm and 785 nm</li> <li>Conversion template from Raman spectrum to binary OIT tag</li> <li>Screening template</li> </ol> <p>"Raman-derived identification tags for mutation screening in amyloid beta peptides" by Phuong Hoang, Niveen M. Khashab is licensed under a <a href="http://creativecommons.org/licenses/by-nc-nd/4.0/">Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License</a>.</p>
Dataset related to article "Identification of a class of non-conventional ER-stress response-derived immunogenic peptides (ERStreP)"
<p>This record contains raw data and scripts (R software) applied to get Figure 5 and Figure S8 related to article “Identification of a class of non-conventional ER-stress response-derived immunogenic peptides (ERStreP)”</p> <p>Immune checkpoint blockade (ICB) has changed the prognosis of previously untreatable tumors. However, a fraction of patients is refractory to ICB therapy. Ongoing efforts to overcome resistance have focused on vaccination strategies using neoepitopes, although these cannot be applied on a large scale due to the "private" nature of cancer mutations. Here we show that infection of tumor cells with <em>Salmonella</em> induces the opening of membrane hemichannels and the release of proteasome-generated peptides in the extracellular milieu via the exacerbation of endoplasmic reticulum (ER)-stress and the unfolded protein response. Peptides released by cancer cells induced a strong antitumor response <em>in vivo</em>, both in mice bearing B16F10 melanomas and in dogs suffering of osteosarcoma and high-grade sarcoma. Mass spectrometry analysis on the supernatant of human melanoma cells revealed 12 released peptides capable of priming healthy donor CD8<sup>+</sup> T cells that recognize and kill human melanoma cells <em>in vitro</em> and when xenotransplanted <em>in vivo</em>, but not healthy melanocytes. Hence, we identified a novel class of tumor antigens that are generated in ER-stressed cells, such as tumor cells, and that do not induce central or peripheral tolerance, nor are presented by healthy cells.</p> <p> </p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.