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122 results for “SMC”
Data from: Topological DNA-binding of SMC-like RecN promotes RecA-mediated DNA double-strand break repair
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Results from DSC analysis over SMC paste (50009092 grade by Menzolit supplier)
<p>Results from DSC analysis over SMC paste automotive grade (50009092 grade provided by Menzolit supplier)</p>
Ubiquity and evolution of structural maintenance of chromosomes (SMC) proteins in eukaryotes
<p>Structural maintenance of chromosomes (SMC) protein complexes are common in Bacteria, Archaea, and Eukaryota. SMC proteins, together with the proteins related to SMC (SMC-related proteins), constitute a superfamily of ATPases. Bacteria/Archaea and Eukaryotes are distinctive from one another in terms of the repertory of SMC proteins. A single type of SMC protein is dimerized in the bacterial and archaeal complexes, whereas eukaryotes possess six distinct SMC subfamilies (SMC1-6), constituting three heterodimeric complexes, namely cohesin, condensin, and SMC5/6 complex. Thus, to bridge the homodimeric SMC complexes in Bacteria and Archaea to the heterodimeric SMC complexes in Eukaryota, we need to invoke multiple duplications of an SMC gene followed by functional divergence. However, to our knowledge, the evolution of the SMC proteins in Eukaryota had not been examined for more than a decade. In this study, we reexamined the ubiquity of SMC1-6 in phylogenetically diverse eukaryotes that cover the major eukaryotic taxonomic groups recognized to date and provide two novel insights into the SMC evolution in eukaryotes. First, multiple secondary losses of SMC5 and SMC6 occurred in the eukaryotic evolution. Second, the SMC proteins constituting cohesin and condensin (i.e., SMC1-4), and SMC5 and SMC6 were derived from closely related but distinct ancestral proteins. Based on the above-mentioned findings, we discuss how SMC1-6 have diverged from the archaeal homologs.</p>
Figure 2 from: Bernardi LFO, Prous X, Ribeiro MS, Mascarenhas J, Genelhú SMC, Simões MH, Bezerra T (2019) First record of albinism for the doglike bat, Peropteryx kappleri Peters, 1867 (Chiroptera, Emballonuridae). Subterranean Biology 30: 33-40. https://doi.org/10.3897/subtbiol.30.34223
Figure 2 Albino specimens of Peropteryx observed in caves of Floresta Nacional de Carajás. A–C male specimen of PeropteryxkappleriD juvenile specimen of Peropteryxkappleri.
Figure 1 from: Bernardi LFO, Prous X, Ribeiro MS, Mascarenhas J, Genelhú SMC, Simões MH, Bezerra T (2019) First record of albinism for the doglike bat, Peropteryx kappleri Peters, 1867 (Chiroptera, Emballonuridae). Subterranean Biology 30: 33-40. https://doi.org/10.3897/subtbiol.30.34223
Figure 1 Location of the caves where the specimens of Peropteryxklaperi were observed in the municipalities of Parauapebas (cavern PESE–0004) and Canaã dos Carajas (cavern S11D–0007), in southeastern Pará, Brazil.
Ubiquity and evolution of structural maintenance of chromosomes (SMC) proteins in eukaryotes
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DNA-loop extruding SMC complexes can traverse one another in vivo
GEO Series GSE155279. Bacillus subtilis PY79. 81 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Effect of ADAR1 and MDA5 knock down by siRNA on human SMC phenotypic modulation and calcification in vitro
GEO Series GSE254862. Homo sapiens. 42 samples. Type: Expression profiling by high throughput sequencing.
Lineage-specific iPSC-Derived SMC Modeling Predicts Integrin Alpha-V Antagonism Reduces Aortic Root Aneurysm Formation in Marfan Syndrome Mice
GEO Series GSE223807. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
single cell RNA sequencing of SMC specific Yap1 knockout mouse aorta
GEO Series GSE213735. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
SMC translocation is unaffected by an excess of nucleoid associated proteins in vivo
GEO Series GSE269767. Bacillus subtilis PY79. 54 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
FAK activity alters the transcriptional landscape during SMC phenotypic switching
GEO Series GSE183143. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Bacillus subtilis: Smc-TAP ChIP-on-chip
GEO Series GSE14693. Bacillus subtilis. 1 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Effect of Smc and interaction with ParA on ParB binding to DNA in Pseudomonas aeruginosa
GEO Series GSE213881. Pseudomonas aeruginosa. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bacillus subtilis SMC complexes juxtapose chromosome arms as they travel from origin to terminus
GEO Series GSE85612. Bacillus subtilis PY79. 59 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
Chromosomal domain formation by archaeal SMC, a roadblock protein, and DNA shape [RNA-seq]
GEO Series GSE267299. Thermococcus kodakarensis. 12 samples. Type: Expression profiling by high throughput sequencing.
Transforming Growth Factor-β (TGFβ) Prevents Hypertension-Induced Aortic Dissection in Adult Mice via Extracellular Matrix Production (Single cells KO vs. WT SMC)
GEO Series GSE194083. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Examination of DPY-30, DPY-27, SDC-3, DPY-26, MIX-1, SMC-4, ASH-2, RNA Polymerase II binding in wild type and DCC mutant embryos
GEO Series GSE25833. Caenorhabditis elegans. 44 samples. Type: Genome binding/occupancy profiling by genome tiling array.
The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome
GEO Series GSE115984. Mus musculus. 108 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome (Repli-seq)
GEO Series GSE122196. Mus musculus. 8 samples. Type: Other.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.