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47
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ShareScore release 0.9.0
Dataset results
47 results for “Salinity genes”
Gene Expression in Prokaryotic Microbial Assemblages Across Salinity Gradients in the Columbia River Coastal Margin
GEO Series GSE18303. Archaea; Bacteria; uncultured prokaryote. 64 samples. Type: Expression profiling by array.
Differential Regulation of Genes Involved in Root Morphogenesis and Cell Wall Modification is Associated with Salinity Tolerance in Chickpea
GEO Series GSE110127. Cicer arietinum. 24 samples. Type: Expression profiling by high throughput sequencing.
Salinity stress inducible genes in rice
GEO Series GSE20746. Oryza sativa. 4 samples. Type: Expression profiling by array.
Comparison of gene expression in the nucleus accumbens of rats expressing or not the conditioned place preference to cocaine [CPPE, nCPPE, Saline after cocaine reinstatement]
GEO Series GSE169666. Rattus norvegicus. 36 samples. Type: Expression profiling by high throughput sequencing.
Data from: Gene expression plasticity in response to salinity acclimation in threespine stickleback ecotypes from different salinity habitats
Phenotypic plasticity is thought to facilitate the colonization of novel environments and shape the direction of evolution in colonizing populations. However, the relative prevalence of various predicted patterns of changes in phenotypic plasticity following colonization remain unclear. Here we use a whole-transcriptome approach to characterize patterns of gene expression plasticity in the gills of a freshwater-adapted and a saltwater-adapted ecotype of threespine stickleback (Gasterosteus aculeatus) exposed to a range of salinities. The response of the gill transcriptome to environmental salinity had a large shared component common to both ecotypes (2,159 genes) with significant enrichment of genes involved in transmembrane ion transport and the restructuring of the gill epithelium. This transcriptional response to freshwater acclimation is induced at salinities below two parts per thousand. There was also differentiation in gene expression patterns between ecotypes (2,515 genes), particularly in processes important for changes in the gill structure and permeability. Only 508 genes that differed between ecotypes also responded to salinity and no specific processes were enriched among this gene set, and an even smaller number (87 genes) showed evidence of changes in the extent of the response to salinity acclimation between ecotypes. No pattern of relative expression dominated among these genes, suggesting that neither gains nor losses of plasticity dominated the changes in expression patterns between the ecotypes. These data demonstrate that multiple patterns of changes in gene expression plasticity can occur following colonization of novel habitats.
Gene expression analysis of eight-cell stage rat embryos sired by paternally exposed males to saline or BEP
GEO Series GSE55842. Rattus norvegicus. 8 samples. Type: Expression profiling by RT-PCR.
Data from: Gene expression plasticity in response to salinity acclimation in threespine stickleback ecotypes from different salinity habitats
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Salinity induced gene expression profiling in 8 diverse rice genotypes
GEO Series GSE79043. Oryza sativa. 46 samples. Type: Expression profiling by array.
Genome-wide gene expression in HDAC5 wildtype and knockout mice treated with chronic cocaine or saline
GEO Series GSE9134. Mus musculus. 30 samples. Type: Expression profiling by array.
Gene expression patterns in roots of Camelina sativa with enhanced salinity tolerance arising from growth in soil treated with plant growth promoting bacteria producing ACC deaminase or from expressio
GEO Series GSE103720. Camelina sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Gene expression in the anterior cingulate cortex in mice treated with ketamine (3mg/kg) or sleep deprivation (SD) during 12 hrs., and saline as the control group.
GEO Series GSE93041. Mus musculus. 9 samples. Type: Expression profiling by array.
Gene expression profile of IGROV1 cells after treatment of saline or CpG-ODN
GEO Series GSE23491. Homo sapiens. 20 samples. Type: Expression profiling by array.
Genome-wide Expression Profiles of Drought and High-salinity Stresses-responsive Genes in Rice (Oryza Sativa L. Indica)
GEO Series GSE6533. Oryza sativa. 21 samples. Type: Expression profiling by array.
Gene expression from SCID-hu mice treated with saline (control) or intermittent PTH
GEO Series GSE24068. Homo sapiens. 10 samples. Type: Expression profiling by array.
Comparative analysis of gene expression in ob/ob leptin-treated and ob/ob saline-treated lungs.
GEO Series GSE10915. Mus musculus. 6 samples. Type: Expression profiling by array.
Genome-wide Gene Expression Profiling of Salinity Responsiveness in Rice
GEO Series GSE58603. Oryza sativa. 36 samples. Type: Expression profiling by array.
Gene expression in nucleus accumbens tissue of Foxp2 heterozygous mice (S321X/+) and wild-type littermates (WT) following single cocaine or saline injection
GEO Series GSE47457. Mus musculus. 23 samples. Type: Expression profiling by array.
Effect of different salinities on the expression of growth genes in Thalassiosira pseudonana
GEO Series GSE224517. Thalassiosira pseudonana. 18 samples. Type: Expression profiling by high throughput sequencing.
Comparison of gene expression in the nucleus accumbens of rats expressing or not the conditioned place preference to cocaine [CPPE, nCPPE, Saline]
GEO Series GSE169665. Rattus norvegicus. 36 samples. Type: Expression profiling by high throughput sequencing.
Time-series analysis of gene expression of Oryza sativa tropical japonica subgroup (Azucena) under saline stress conditions at the seedling stage
GEO Series GSE284308. Oryza sativa tropical japonica subgroup. 30 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.