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zenodo40/100

FIG. 1 in The Miocene La Venta Biome (Colombia): A century of research and future perspectives

FIG. 1. — Location and landscape of La Tatacoa Desert, Colombia: A, geographic location of La Venta fossil site in the Magdalena Valley, Colombia. Modified from Zapata et al. (2023); B, badlands of La Tatacoa Desert. Abbreviations: WC, Western Cordillera; CC, Central Cordillera; EC, Eastern Cordillera; LV, La Venta. Photo by C. Ziegler.

opencc-zeroDec 2023View details →
dryad40/100

Rapid in situ diversification rates in Rhamnaceae explain the parallel evolution of high diversity in temperate biomes from global to local scales

<p>The macroevolutionary processes that have shaped biodiversity across the temperate realm remain poorly understood and may have resulted from evolutionary dynamics related to diversification rates, dispersal rates, and colonization times, closely coupled with Cenozoic climate change.</p> <p>We integrated phylogenomic, environmental ordination, and macroevolutionary analyses for the cosmopolitan angiosperm family Rhamnaceae to disentangle the evolutionary processes that have contributed to high species diversity within and across temperate biomes.</p> <p>Our results show independent colonization of environmentally similar but geographically separated temperate regions mainly during the Oligocene, consistent with the global expansion of temperate biomes. High global, regional, and local temperate diversity was the result of high <em>in</em> <em>situ</em> diversification rates, rather than high immigration rates or accumulation time, except for Southern China, which was colonized much earlier than other regions. The relatively common lineage dispersals out of temperate hotspots highlights strong source-sink dynamics across the cosmopolitan distribution of Rhamnaceae.</p> <p>The proliferation of temperate environments since the Oligocene may have provided the ecological opportunity for rapid <em>in</em> <em>situ</em> diversification of Rhamnaceae across the temperate realm. Our study illustrates the importance of high <em>in</em> <em>situ</em><strong> </strong>diversification rates for the establishment of modern temperate biomes and biodiversity hotspots across spatial scales.</p>

opencc-zeroJan 2024View details →
zenodo40/100

Figure 9 in Description of a new endemic genus of the Namib Desert and adjacent biomes in Namibia (Tineoidea: Tineidae: Hapsiferinae)

Figure 9 – Rooiklipia spec., female genitalia, A: R. mirabib, ventral; B–C: R. michaelmeyi spec. nov., B: ventral, C: lateral.

opencc-by-4.0Jul 2021View details →
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Figure 11 in Description of a new endemic genus of the Namib Desert and adjacent biomes in Namibia (Tineoidea: Tineidae: Hapsiferinae)

Figure 11 – Landscape at Rooiklip guest farm, dry season 2019, with Gamsberg (2349 m) in the background.

opencc-by-4.0Jul 2021View details →
zenodo40/100

Figure 13 in Description of a new endemic genus of the Namib Desert and adjacent biomes in Namibia (Tineoidea: Tineidae: Hapsiferinae)

Figure 13 – Best RAxML tree topology of the COI-5P fragment, with bootstrap values displayed above nodes.

opencc-by-4.0Jul 2021View details →
zenodo40/100

Copernicus Global Land Service: Global biome cluster layer for the 100m global land cover processing line

<p><strong>A map of 73 global biome clusters, geographic areas that were grouped to optimize the global 100m land cover processing.</strong></p> <p>In order to group Earth Observation&nbsp;data for faster processing or adaptation of algorithms to specific regions, the 100m global land cover (CGLS-LC100) algorithm uses a Global Biome Cluster layer. The term <em>biome cluster</em>&nbsp;hereby refers to a geographic area which has similar bio-geophysical parameters and, therefore, can be grouped for processing. In other words, the biome cluster layer can be seen as an ecological regionalisation which outlines areas of similar environmental conditions, ecological processes, and biotic communities (Coops et al., 2018). There are already several global regionalisation layers existing, e.g. Ecoregions 2017 global dataset (Dinerstein et al., 2017), Geiger-Koeppen global ecozones after Olofsson update (Olofsson et al., 2012), Global ecological zones for FAO forest reporting with update 2010 (FAO, 2012). But several tests in the CGLS-LC100 workflow have shown that the existing layers did not provide the required global and continental classification accuracy. These findings go along with Coops et al. (2018) who stated that &quot;<em>Most regionalisations are made based on subjective criteria, and cannot be readily revised, leading to outstanding questions with respect to how to optimally develop and define them.&quot;</em></p> <p>Therefore, we decided to develop a customized ecological regionalisation layer which performs best with the given PROBA-V remote sensing data and the specifications of the CGLS-LC100 product. It groups spectral similar areas and helps to optimize the later classification/regression to regional patterns. Input into the layer creation were well-known existing datasets which were combined, re-grouped and advanced based on prior CGLS-LC100 classification results and local mapping knowledge of the workflow developer. To ensure that this layer is clearly separable from other existing regionalisations and not mistakenly interpreted as an eco-region layer, we decide to call it <em>biome clusters</em>&nbsp;<em>layer</em>.</p> <p>The following steps outline the global biome clusters layer generation:</p> <ul> <li>Spatial union of Ecoregions 2017 dataset (Dinerstein et al., 2017), Geiger-Koeppen dataset (Olofsson et al., 2012) and Global FAO eco-regions datasets (FAO, 2012);</li> <li>Regrouping and dissolving by using experience from first global CGLS-LC100 mapping results and subjective mapping experience of the developer;</li> <li>Refinement of the biome clusters in the High North latitudes via incorporation of a Global tree-line layer (Alaska Geobotany Center, 2003);</li> <li>Manual improvement of borders between biome clusters to reduce classification artefacts by using a DEM and mapping experience from previous projects and continental test runs;</li> <li>Usage of a global land/sea mask, the Sentinel-2 tiling grid and PROBA-V imaging extent to extend the borders of the biome clusters into the sea to make sure that also small islands on the coastline are correctly processed.</li> </ul> <p>When developing a regionalisation, the definition of the clusters and the boundaries that delineate them in time and space is the key challenge. Overall, the map distinguishes <strong>73 global biome clusters</strong>.</p>

opencc-by-4.0Jan 2022View details →
dryad40/100

Cross-biome synthesis of source versus sink limits to tree growth

<p>Uncertainties surrounding tree carbon allocation to growth are a major limitation to projections of forest carbon sequestration and response to climate change. The prevalence and extent to which carbon assimilation (source) or cambial activity (sink) mediate wood production are fundamentally important and remain elusive. We quantified source-sink relations across biomes by combining eddy-covariance gross primary production with extensive on-site and regional tree ring observations. We found widespread temporal decoupling between carbon assimilation and tree growth, underpinned by contrasting climatic sensitivities of these two processes. Substantial differences in assimilation-growth decoupling between angiosperms and gymnosperms were determined, as well as stronger decoupling with canopy closure, aridity, and decreasing temperatures. Our results reveal pervasive sink control over tree growth that is likely to be increasingly prominent under global climate change.</p>

opencc-zeroMar 2022View details →
zenodo40/100

Text-fig. 7. a–d: Zelkova zelkovifolia. a: Fruiting twig, Oriolo MSF 639. b: Oriolo MSF 685. c: Oriolo MSF 859. d: Oriolo MSF 947. e: Unknown leaf fragment resembling Lonicera nigra L., 1753, Oriolo MSF 859. f: Crataegus aff. monogyna Oriolo MSF 639-1. g: Fagus aff. sylvatica Oriolo MSF 648. Scale bars 10 mm (a–g). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 7. a–d: Zelkova zelkovifolia. a: Fruiting twig, Oriolo MSF 639. b: Oriolo MSF 685. c: Oriolo MSF 859. d: Oriolo MSF 947. e: Unknown leaf fragment resembling Lonicera nigra L., 1753, Oriolo MSF 859. f: Crataegus aff. monogyna Oriolo MSF 639-1. g: Fagus aff. sylvatica Oriolo MSF 648. Scale bars 10 mm (a–g).

opencc-by-4.0Aug 2022View details →
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Text-fig. 1. a: Po Plain and foothills of the Northern Apennine in Northern Italy (inset) with the location of Oriolo (black star) and other Early and Middle Pleistocene plant localities, Enza and Stirone. Red lines indicate the frontal thrust arcs (modified from Martinetto et al. 2015). b: The "La Salita" section, Oriolo and chronology of the two "Sabbie gialle" cycles based on large mammals and palaeomagnetic correlation (modified from Toniato et al. 2017; IMMS 2020* [Italian Mediterranean Marine Stages] updated from Cohen and Gibbars 2020; GTS 2021* [Global Time Scale] updated from Head et al. 2021). c: Quarry "La Salita", Oriolo, in 1987. Main unconformities (U) separating the two "Sabbie gialle" cycles and terrestrial deposits on top are shown. Leaf symbols indicate the positions of some of the layers rich in fossil leaves (photo by G. B. Vai, modified). d: Surroundings of Faenza with the location of Oriolo and adjacent coeval sites yielding plant macrofossils. in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 1. a: Po Plain and foothills of the Northern Apennine in Northern Italy (inset) with the location of Oriolo (black star) and other Early and Middle Pleistocene plant localities, Enza and Stirone. Red lines indicate the frontal thrust arcs (modified from Martinetto et al. 2015). b: The "La Salita" section, Oriolo and chronology of the two "Sabbie gialle" cycles based on large mammals and palaeomagnetic correlation (modified from Toniato et al. 2017; IMMS 2020* [Italian Mediterranean Marine Stages] updated from Cohen and Gibbars 2020; GTS 2021* [Global Time Scale] updated from Head et al. 2021). c: Quarry "La Salita", Oriolo, in 1987. Main unconformities (U) separating the two "Sabbie gialle" cycles and terrestrial deposits on top are shown. Leaf symbols indicate the positions of some of the layers rich in fossil leaves (photo by G. B. Vai, modified). d: Surroundings of Faenza with the location of Oriolo and adjacent coeval sites yielding plant macrofossils.

opencc-by-4.0Aug 2022View details →
zenodo40/100

Text-fig. 4. a–e: Parrotia aff. persica. a: Oriolo MSF 991 capsule. b: Oriolo MSF 994 endocarp. c: Oriolo MSF 654. d: Oriolo MSF 743. e: Oriolo MSF 678. f: Vitis sp. Oriolo MSF 838. g–k: Gleditsia aff. caspica. g: Oriolo MSF 920. h: Oriolo MSF 939. i: Oriolo MSF 787. j: Oriolo MSF 917. k: Oriolo MSF 925. Scale bars 10 mm (a, h–k), 5 mm (b), 50 mm (c–f). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 4. a–e: Parrotia aff. persica. a: Oriolo MSF 991 capsule. b: Oriolo MSF 994 endocarp. c: Oriolo MSF 654. d: Oriolo MSF 743. e: Oriolo MSF 678. f: Vitis sp. Oriolo MSF 838. g–k: Gleditsia aff. caspica. g: Oriolo MSF 920. h: Oriolo MSF 939. i: Oriolo MSF 787. j: Oriolo MSF 917. k: Oriolo MSF 925. Scale bars 10 mm (a, h–k), 5 mm (b), 50 mm (c–f).

opencc-by-4.0Aug 2022View details →
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Text-fig. A1. a: Ulmus longifolia UNGER, 1847 (Unger 1847: pl. 26, fig. 5). b: Ulmus braunii HEER, 1856 (Heer 1856: pl. 79, fig. 17). c: Ulmus affinis A.MASSAL., 1853 (Massallongo 1854: pl. 4, fig. 8). d, e: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium K566057), UK. Scale bars 30 mm (a–e). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. A1. a: Ulmus longifolia UNGER, 1847 (Unger 1847: pl. 26, fig. 5). b: Ulmus braunii HEER, 1856 (Heer 1856: pl. 79, fig. 17). c: Ulmus affinis A.MASSAL., 1853 (Massallongo 1854: pl. 4, fig. 8). d, e: Ulmus carpinifolia GLED., 1773 syn. of Ulmus minor MILL., 1768, (herbarium K566057), UK. Scale bars 30 mm (a–e).

opencc-by-4.0Aug 2022View details →
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Text-fig. 13. a, d–g: Acer aemilianum. b, c: Acer palmatum and A. sieboldianum modern leaves (NMNS Cleared Leaf Database). a: Oriolo MSF 661, 7-lobed leaf. b: Specimen U 1049, lobe detail showing finely serrate leaf margin. c: Specimen T 0246, 9-lobed leaf with coarsely serrate leaf margin. d: Oriolo MSF 645-1, 9-lobed leaf with two small additional lobes. e: Oriolo MSF 645. f: Oriolo MSF 660, 9-lobed specimen. g: Oriolo MSF 660-1. White arrows indicate position along lamina lobes where marginal serration starts. Scale bars 10 mm (a–c, f, g), 50 mm (d, e). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 13. a, d–g: Acer aemilianum. b, c: Acer palmatum and A. sieboldianum modern leaves (NMNS Cleared Leaf Database). a: Oriolo MSF 661, 7-lobed leaf. b: Specimen U 1049, lobe detail showing finely serrate leaf margin. c: Specimen T 0246, 9-lobed leaf with coarsely serrate leaf margin. d: Oriolo MSF 645-1, 9-lobed leaf with two small additional lobes. e: Oriolo MSF 645. f: Oriolo MSF 660, 9-lobed specimen. g: Oriolo MSF 660-1. White arrows indicate position along lamina lobes where marginal serration starts. Scale bars 10 mm (a–c, f, g), 50 mm (d, e).

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Text-fig. 3. a–e: Berberis auriolensis sp. nov. a: Oriolo MSF 644, Holotype. b: Oriolo MSF 794, asterisks indicate position of teeth. c: Oriolo MSF 784. d: Oriolo MSF 789. e: Oriolo MSF 790. f–h: Modern leaves of Berberis. f: Berberis amurensis var. japonica modern leaf (NMNS Cleared Leaf Database specimen T 0454). g: Berberis koreana modern leaf (NMNS Cleared Leaf Database specimen T 1646). h: Berberis canadensis modern leaf (NMNS Cleared Leaf Database specimen T 1670). i: Epimedium cf. praeaspera Oriolo MSF 778, asterisk indicates position of tooth. j: Clematis aff. vitalba Oriolo MSF 630. Scale bars 10 mm (a–j). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 3. a–e: Berberis auriolensis sp. nov. a: Oriolo MSF 644, Holotype. b: Oriolo MSF 794, asterisks indicate position of teeth. c: Oriolo MSF 784. d: Oriolo MSF 789. e: Oriolo MSF 790. f–h: Modern leaves of Berberis. f: Berberis amurensis var. japonica modern leaf (NMNS Cleared Leaf Database specimen T 0454). g: Berberis koreana modern leaf (NMNS Cleared Leaf Database specimen T 1646). h: Berberis canadensis modern leaf (NMNS Cleared Leaf Database specimen T 1670). i: Epimedium cf. praeaspera Oriolo MSF 778, asterisk indicates position of tooth. j: Clematis aff. vitalba Oriolo MSF 630. Scale bars 10 mm (a–j).

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Text-fig. 6. a: cf. Rubus sp., leaflet Oriolo MSF 676. b, c: cf. Sorbus. b: Oriolo MSF 821. c: MSF 677. d: Spiraea aff. cana Oriolo MSF 944. e: Rhamnus aff. cathartica Oriolo MSF 909. f–l: Ulmus affinis. f: Oriolo MSF 717. g: Oriolo MSF 725. h: Oriolo MSF 724. i: Oriolo MSF 721. j: Oriolo MSF 723. k: Oriolo MSF 637. l: Oriolo MSF 722. m: Zelkova zelkovifolia Oriolo 28 MSF 633. Scale bars 10 mm (a–f, m), 50 mm (g–l). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 6. a: cf. Rubus sp., leaflet Oriolo MSF 676. b, c: cf. Sorbus. b: Oriolo MSF 821. c: MSF 677. d: Spiraea aff. cana Oriolo MSF 944. e: Rhamnus aff. cathartica Oriolo MSF 909. f–l: Ulmus affinis. f: Oriolo MSF 717. g: Oriolo MSF 725. h: Oriolo MSF 724. i: Oriolo MSF 721. j: Oriolo MSF 723. k: Oriolo MSF 637. l: Oriolo MSF 722. m: Zelkova zelkovifolia Oriolo 28 MSF 633. Scale bars 10 mm (a–f, m), 50 mm (g–l).

opencc-by-4.0Aug 2022View details →
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Text-fig. 10. a, b: Carpinus aff. betulus. a: Leaves, Oriolo MSF 640. b: Fruit, Oriolo MSF 985. c–g: Carpinus aff. orientalis. c: Oriolo MSF 895. d: Oriolo MSF 899. e: Oriolo MSF 848. f: Fruit, Oriolo MSF 986. g: Fruit, Oriolo MSF 985. Scale bars 10 mm (a–g). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 10. a, b: Carpinus aff. betulus. a: Leaves, Oriolo MSF 640. b: Fruit, Oriolo MSF 985. c–g: Carpinus aff. orientalis. c: Oriolo MSF 895. d: Oriolo MSF 899. e: Oriolo MSF 848. f: Fruit, Oriolo MSF 986. g: Fruit, Oriolo MSF 985. Scale bars 10 mm (a–g).

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Text-fig. 5. a: Gleditsia aff. caspica Oriolo MSF 935. b: Gleditsia caspica modern leaflet (NMNS Cleared Leaf Database specimen T 1484). c: Crataegus aff. monogyna Oriolo MSF 836. d: Mespilus aff. germanica Oriolo MSF 785. e, g, h: Pyracantha aff. coccinea. e: Oriolo MSF 627. g: Oriolo MSF 627. h: Oriolo MSF 684. f: Pyracantha coccinea modern leaf for comparison (NMNH 03695728). i: Pyracantha coccinea modern leaf for comparison (E00408203). j, k: Sorbus aff. domestica. j: Oriolo MSF 636. k: Oriolo MSF 824. Scale bars 10 mm (a–k). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 5. a: Gleditsia aff. caspica Oriolo MSF 935. b: Gleditsia caspica modern leaflet (NMNS Cleared Leaf Database specimen T 1484). c: Crataegus aff. monogyna Oriolo MSF 836. d: Mespilus aff. germanica Oriolo MSF 785. e, g, h: Pyracantha aff. coccinea. e: Oriolo MSF 627. g: Oriolo MSF 627. h: Oriolo MSF 684. f: Pyracantha coccinea modern leaf for comparison (NMNH 03695728). i: Pyracantha coccinea modern leaf for comparison (E00408203). j, k: Sorbus aff. domestica. j: Oriolo MSF 636. k: Oriolo MSF 824. Scale bars 10 mm (a–k).

opencc-by-4.0Aug 2022View details →
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Text-fig. 2. a, b: Pinus aff. peuce cones. a: Oriolo, MSF 643. b: Tebano, MSF 1021. c: Abies aff. alba cone scale, Oriolo MSF 988. d, e: Tsuga chiarugii cones. d: Oriolo MSF 638. e: Oriolo MSF 979. f, h: Bambusa lugdunensis leaves and leafy axis. f: Oriolo MSF 937. h: Oriolo MSF 651. g: Modern leaf of Yushania for comparison (NMNS Cleared Leaf Database specimen U1347). i: Phragmites sp. Oriolo MSF n.n. Scale bars 50 mm (a, b, h, i), 10 mm (c–g). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 2. a, b: Pinus aff. peuce cones. a: Oriolo, MSF 643. b: Tebano, MSF 1021. c: Abies aff. alba cone scale, Oriolo MSF 988. d, e: Tsuga chiarugii cones. d: Oriolo MSF 638. e: Oriolo MSF 979. f, h: Bambusa lugdunensis leaves and leafy axis. f: Oriolo MSF 937. h: Oriolo MSF 651. g: Modern leaf of Yushania for comparison (NMNS Cleared Leaf Database specimen U1347). i: Phragmites sp. Oriolo MSF n.n. Scale bars 50 mm (a, b, h, i), 10 mm (c–g).

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Text-fig. 12. a, b: Salix aff. caprea. a: Oriolo MSF 857. b: Oriolo MSF 860. c, d: Salix aff. alba. c: Oriolo MSF 854. d: Oriolo MSF 854. e, f: Salix aff. viminalis vel eleagnos. e: Oriolo MSF 803. f: Oriolo MSF 801. g: Salix aff. triandra Oriolo MSF 626. h–k: Salix spp. div. indet. h: Oriolo MSF 865. i: Oriolo MSF 807. j: Oriolo MSF 804. k: Oriolo MSF 802. Scale bars 10 mm (a–e, h, i–k), 50 mm (f, g). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 12. a, b: Salix aff. caprea. a: Oriolo MSF 857. b: Oriolo MSF 860. c, d: Salix aff. alba. c: Oriolo MSF 854. d: Oriolo MSF 854. e, f: Salix aff. viminalis vel eleagnos. e: Oriolo MSF 803. f: Oriolo MSF 801. g: Salix aff. triandra Oriolo MSF 626. h–k: Salix spp. div. indet. h: Oriolo MSF 865. i: Oriolo MSF 807. j: Oriolo MSF 804. k: Oriolo MSF 802. Scale bars 10 mm (a–e, h, i–k), 50 mm (f, g).

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Text-fig. 8. a–e: Quercus aff. cerris. a: Cup, Oriolo MSF 984. b: Cup, Oriolo MSF 982. c: Leaf, Oriolo MSF 689. d: Leaf, Oriolo MSF 659. e: Oriolo MSF 657. f: Quercus aff. pubescens Oriolo MSF 688. g: Quercus sect. Quercus acorn, Oriolo MSF 658. h–j: Quercus iberica. h: Oriolo MSF 694. i: Oriolo MSF 639. j: Oriolo MSF 698. Scale bars 10 mm (a, b, g), 50 mm (c–f, h–j). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 8. a–e: Quercus aff. cerris. a: Cup, Oriolo MSF 984. b: Cup, Oriolo MSF 982. c: Leaf, Oriolo MSF 689. d: Leaf, Oriolo MSF 659. e: Oriolo MSF 657. f: Quercus aff. pubescens Oriolo MSF 688. g: Quercus sect. Quercus acorn, Oriolo MSF 658. h–j: Quercus iberica. h: Oriolo MSF 694. i: Oriolo MSF 639. j: Oriolo MSF 698. Scale bars 10 mm (a, b, g), 50 mm (c–f, h–j).

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Text-fig. 15. a–c: Tilia sp. a: Oriolo MSF 679. b: Oriolo MSF n.n., fruiting bract. c: Oriolo MSF 908. d: Fraxinus aff. angustifolia subsp. oxycarpa Oriolo MSF 782. e–i: Hedera aff. helix. Polymorphic leaves. e: Oriolo MSF 628. f: Oriolo MSF 650. g: Oriolo MSF 797. h: Oriolo MSF 799. i: Oriolo MSF 796. Scale bars 50 mm (a, c–e), 10 mm (b, f–i). in The Late Early Pleistocene Flora Of Oriolo, Faenza (Italy): Assembly Of The Modern Forest Biome

Text-fig. 15. a–c: Tilia sp. a: Oriolo MSF 679. b: Oriolo MSF n.n., fruiting bract. c: Oriolo MSF 908. d: Fraxinus aff. angustifolia subsp. oxycarpa Oriolo MSF 782. e–i: Hedera aff. helix. Polymorphic leaves. e: Oriolo MSF 628. f: Oriolo MSF 650. g: Oriolo MSF 797. h: Oriolo MSF 799. i: Oriolo MSF 796. Scale bars 50 mm (a, c–e), 10 mm (b, f–i).

opencc-by-4.0Aug 2022View details →

ScienceDex guides

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record