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741 results for “chicken”
Dataset: Chicken Soup for the Soul Entertainment, Inc. (CSSEL) Stock Performance
This dataset provides historical stock market performance data for specific companies. It enables users to analyze and understand the past trends and fluctuations in stock prices over time. This information can be utilized for various purposes such as investment analysis, financial research, and market trend forecasting.
Figure 5 in Quantitative phosphoproteomic analysis of chicken DF-1 cells infected with Eimeria tenella, using tandem mass tag (TMT) and parallel reaction monitoring (PRM) mass spectrometry
Figure 5. KEGG pathways of the differentially expressed phosphorylated proteins. The abscissa indicates the first 10 significantly enriched KEGG pathways and the ordinate indicates the significance of enriched KEGG pathways, the more left, the more significant.
Figure 4 in Quantitative phosphoproteomic analysis of chicken DF-1 cells infected with Eimeria tenella, using tandem mass tag (TMT) and parallel reaction monitoring (PRM) mass spectrometry
Figure 4. Gene ontology annotations of the differentially expressed phosphorylated proteins. The abscissa indicates the enriched GO functional classification, including biological process (A), cellular component (B), and molecular function (C). The ordinate indicates the size of the significance of corresponding to each entry, the more left, the more significant.
Figure 3 in Quantitative phosphoproteomic analysis of chicken DF-1 cells infected with Eimeria tenella, using tandem mass tag (TMT) and parallel reaction monitoring (PRM) mass spectrometry
Figure 3. Clustering heatmap of different expression phosphorylated peptides. Each row represents a phosphorylated peptide segment, each column represents a group of samples. The logarithmic value (logarithmic transformation based on 2) of the significantly differentially expressed phosphorylated peptides in different samples is displayed in the clustering heatmap in different colors. Red represents significant upregulation of phosphorylated peptides; blue represents significant down-regulation of phosphorylated peptides.
Figure 2 in Quantitative phosphoproteomic analysis of chicken DF-1 cells infected with Eimeria tenella, using tandem mass tag (TMT) and parallel reaction monitoring (PRM) mass spectrometry
Figure 2. Volcano plots from different group comparisons. The abscissa indicates difference multiple (logarithmic transformation based on 2), the ordinate indicates the significant of difference (logarithmic transformation based on 10). The red point is significantly upregulated phosphorylated peptide segment, the blue point is significantly downregulated phosphorylated peptide segment and the gray point is a phosphorylated peptide segment with no significant difference.
Evolution of allele frequencies in two chicken lines divergently selected for meat ultimate pH
<p>Two lines of chicken were divergently selected during 5 generations for high or low meat ultimate pH. Genotypes at about 50K SNPs were obtained for a sample of individuals in each line and at each generation (including the founder population G0). The present dataset provides the allele frequencies for all SNP and generations in the two lines, at plink frq.strat format. The position of the SNP on the chicken genome are provided in another file at plink .map format.</p> <p>These data were first ued in the following publication:</p> <p>Le Bihan-Duval, E., Hennequet-Antier, C., Berri, C., Beauclercq, S. A., Bourin, M. C., Boulay, M., ... & Boitard, S. (2018). Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL. <em>BMC genomics</em>, <em>19</em>(1), 294.</p>
Fig. 3 in Development of in-country live food production for amphibian conservation: The Mountain Chicken Frog (Leptodactylus fallax) on Dominica, West Indies
Fig. 3. (A) Two rows of cricket breeding containers and cockroach breeding bins below. (B) Inside of a cricket breeding container, including refugia, food items, and several egg laying containers, transplanted into an empty container to allow eggs to hatch. (C) Inside view of a cockroach breeding bin, including substrate, refugia, and several food items. Photos: D. Nicholson.
Fig. 2 in Development of in-country live food production for amphibian conservation: The Mountain Chicken Frog (Leptodactylus fallax) on Dominica, West Indies
Fig. 2. Cultured species at the CBP in Dominica. (A) Gryllodes sigillatus. (B) Gryllus assimilis. (C) Caribacusta dominica. (D) Blaberus discoidalis. (E) Zophobas atratus. (F) Veronicella sloanii. (G) Pleurodonte dentiens. (H) Leptogoniulus sp. Photos: D. Nicholson.
Fig. 1 in Cultural association and its role in garnering support for conservation: the case of the Mountain Chicken Frog on Dominica
Fig. 1. The Commonwealth of Dominica, and its position in the Caribbean, showing the distribution of Leptodactylus fallax and the study locations (After Adams et al. 2014; IUCN SSC Amphibian Specialist Group 2017).
Fig. 2. Recent chicken Gallus domesticus Linnaeus, 1758 RAM R1 in Head and neck posture in sauropod dinosaurs inferred from extant animals
Fig. 2. Recent chicken Gallus domesticus Linnaeus, 1758 RAM R1 in right lateral view, illustrating maximally extended pose (A) and ONP (B): last four cervical and first four dorsal vertebrae. Note the strong ventral deflection of the base of the neck in ONP, contrasting with the very strong dorsal deflection illustrated in a live chicken by Vidal et al. (1986: fig. 7).
Hepatic transcriptomic analysis reveals differential regulation of metabolic and immune pathways in three strains of chickens with distinct growth rate exposed to mixed parasites infections
<p><span>This dataset was generated from the study investigating hepatic gene expression in three strains of chickens: Ross-308 (R), Lohmann Brown Plus (LB), and Lohmann Dual (LD), 2 weeks after either an experimental infection (n = 18) with both <em>A. galli</em> and <em>H. gallinarum or kept as uninfected control (n = 12)</em>. </span></p>
[Dataset] Pattern and repeatability of ascarid-specific antigen excretion through chicken faeces, and the diagnostic accuracy of copro-antigen measurements as compared with McMaster egg counts and plasma and egg yolk antibody measurements in laying hens
<p>Comprehensive data examining the pattern and repeatability of ascarid-specific antigen excretion in chicken faeces and the diagnostic accuracy of copro-antigen measurements compared to McMaster egg counts and antibody measurements in laying hens.</p> <p>The dataset consists of observations and measurements obtained from a controlled study involving laying hens infected with mixed <em>Ascaridia galli</em> and<em> Heterakis gallinarum</em>. A total of 179 individual hens were monitored between wpi 2 and 18 and their fecal samples/blood samples were collected at specific time points. Faecel samples were repeatedly collected four(4) consecutive times in one wpi.Hence antigen measurements is 4 X 179 = 716 measurements</p>
Maintenance of genetic diversity despite population fluctuations in the lesser prairie-chicken (Tympanuchus pallidicinctus)
Open the record for dataset details and reuse information.
Behavioural predictability in chickens in response to anxiogenic stimuli is influenced by maternal corticosterone levels during egg formation
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Cooking chicken at home: common or recommended approaches to judge doneness may not assure sufficient inactivation of pathogens
<p>About one third of foodborne illness outbreaks in Europe are acquired in the home and eating undercooked poultry is among consumption practices associated with illness. The aim of this study was to investigate whether actual and recommended practices for monitoring chicken doneness are safe. Seventy-five European households from five European countries were interviewed and videoed while cooking chicken in their private kitchens, including young single men, families with infants/in pregnancy and elderly over seventy years. A cross-national web-survey collected cooking practices for chicken from 3969 households. In a laboratory kitchen, chicken breast fillets were injected with cocktails of Salmonella and Campylobacter and cooked to core temperatures between 55 and 70 °C. Microbial survival in the core and surface of the meat were determined. In a parallel experiment, core colour, colour of juice and texture were recorded. Finally, a range of cooking thermometers from the consumer market were evaluated. The field study identified nine practical approaches for deciding if the chicken was properly cooked. Among these, checking the colour of the meat was commonly used and perceived as a way of mitigating risks among the consumers. Meanwhile, chicken was perceived as hedonically vulnerable to long cooking time. The quantitative survey revealed that households prevalently check cooking status from the inside colour (49.6%) and/or inside texture (39.2%) of the meat. Young men rely more often on the outside colour of the meat (34.7%) and less often on the juices (16.5%) than the elderly (>65 years old; 25.8% and 24.6%, respectively). The lab study showed that colour change of chicken meat happened below 60 °C, corresponding to less than 3 log reduction of Salmonella and Campylobacter. At a core temperature of 70 oC, pathogens survived on the fillet surface not in contact with the frying pan. No correlation between meat texture and microbial inactivation was found. A minority of respondents used a food thermometer, and a challenge with cooking thermometers for home use was long response time. In conclusion, the recommendations from the authorities on monitoring doneness of chicken and current consumer practices do not ensure reduction of pathogens to safe levels. For the domestic cook, determining doneness is both a question of avoiding potential harm and achieving a pleasurable meal. It is discussed how lack of an easy "rule-of-thumb" or tools to check safe cooking at consumer level, as well as national differences in contamination levels, food culture and economy make it difficult to develop international recommendations that are both safe and easily implemented.</p>
Data from: Chicken gut microbiome members limit the spread of an antimicrobial resistance plasmid in Escherichia coli
<p>Plasmid-mediated antimicrobial resistance is a major contributor to the spread of resistance genes within bacterial communities. Successful plasmid spread depends upon a balance between plasmid fitness effects on the host and rates of horizontal transmission. While these key parameters are readily quantified in vitro, the influence of interactions with other microbiome members is largely unknown. Here, we investigated the influence of three genera of lactic acid bacteria (LAB) derived from the chicken gastrointestinal microbiome on the spread of an epidemic narrow-range ESBL resistance plasmid, IncI1 carrying <em>bla<sub>CTX-M-1</sub></em>, in mixed cultures of isogenic <em>Escherichia coli </em>strains. Secreted products of LAB decreased <em>E. coli</em> growth rates in a genus-specific manner but did not affect plasmid transfer rates. Importantly, we quantified plasmid transfer rates by controlling for density-dependent mating opportunities. Parametrization of a mathematical model with our in vitro estimates illustrated that small fitness costs of plasmid carriage may tip the balance towards plasmid loss under growth conditions in the gastrointestinal tract. This work shows that microbial interactions can influence plasmid success and provides an experimental-theoretical framework for further study of plasmid transfer in a microbiome context.</p>
De novo assembly of 20 chicken genomes reveals the undetectable phenomenon for thousands of core genes on micro-chromosomes and sub-telomeric regions
<p>The gene numbers and evolutionary rates of birds were assumed to be much lower than those of mammals, which is in sharp contrast to the huge species number and morphological diversity of birds. It is therefore necessary to construct a complete avian genome and analyze its evolution. We constructed a chicken pan-genome from 20 <em>de novo</em> assembled genomes with high sequencing depth, and identified 1,335 protein-coding genes and 3,011 long noncoding RNAs not found in GRCg6a. The majority of these novel genes were detected across most individuals of the examined transcriptomes but were seldomly measured in each of the DNA sequencing data regardless of Illumina or PacBio technology. Furthermore, different from previous pan-genome models, most of these novel genes were overrepresented on chromosomal sub-telomeric regions and micro-chromosomes, surrounded by extremely high proportions of tandem repeats, which strongly blocks DNA sequencing. These hidden genes were proved to be shared by all chicken genomes, included many housekeeping genes, and enriched in immune pathways. Comparative genomics revealed the novel genes had three-fold elevated substitution rates than known ones, updating the knowledge about evolutionary rates in birds. Our study provides a framework for constructing a better chicken genome, which will contribute towards the understanding of avian evolution and improvement of poultry breeding.</p>
Supplemental Data for "Embryonic Exposure to Tryptophan Yields Bullying Victimization via Reprogramming the Microbiota-Gut-Brain Axis in a Chicken Model"
<p>This is data set associated with an article "Embryonic Exposure to Tryptophan Yields Bullying Victimization via Reprogramming the Microbiota-Gut-Brain Axis in a Chicken Model" by Xiaohong Huang, Jiaying Hu, Haining Peng, and Heng-wei Cheng, including Supplemental Table S1, S2, S3, S4, S5, S6.</p>
Pacbio of Broiler chicken: cecum metagenome
<p>The goal is to sequence and assemble broiler chicken's intestine microbial meta-genome. The data we show is sequenced from cecum microbial by PacBio.</p>
Species as conservation umbrellas: a case study with lesser prairie-chicken (Tympanuchus pallidicinctus) in the southern Great Plains of North America
<p><span>Qualitative index of conservation benefit conferred by management for the lesser prairie chicken on non-target at-risk wildlife species.</span></p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.