Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
433
datasets available to search
ShareScore release 0.9.0
Dataset results
433 results for “differential gene expression analysis”
Data from: Identifying differentially expressed genes under heat stress and developing molecular markers in orchardgrass (Dactylis glomerata L.) through transcriptome analysis
Open the record for dataset details and reuse information.
Data from: De novo assembly of a tadpole shrimp (Triops newberryi) transcriptome and preliminary differential gene expression analysis
Open the record for dataset details and reuse information.
Data from: Genomic identification, characterization and differential expression analysis of SBP-box gene family in Brassica napus
Background: SBP-box genes belong to one of the largest families of transcription factors. Though members of this family have been characterized to be important regulators of diverse biological processes, information of SBP-box genes in the third most important oilseed crop Brassica napus is largely undefined. Results: In the present study, by whole genome bioinformatics analysis and transcriptional profiling, 58 putative members of SBP-box gene family in oilseed rape (Brassica napus L.) were identified and their expression pattern in different tissues as well as possible interaction with miRNAs were analyzed. In addition, B. napus lines with contrasting branch angle were used for investigating the involvement of SBP-box genes in plant architecture regulation. Detailed gene information, including genomic organization, structural feature, conserved domain and phylogenetic relationship of the genes were systematically characterized. By phylogenetic analysis, BnaSBP proteins were classified into eight distinct groups representing the clear orthologous relationships to their family members in Arabidopsis and rice. Expression analysis in twelve tissues including vegetative and reproductive organs showed different expression patterns among the SBP-box genes and a number of the genes exhibit tissue specific expression, indicating their diverse functions involved in the developmental process. Forty-four SBP-box genes were ascertained to contain the putative miR156 binding site, with 30 and 14 of the genes targeted by miR156 at the coding and 3′UTR region, respectively. Relative expression level of miR156 is varied across tissues. Different expression pattern of some BnaSBP genes and the negative correlation of transcription levels between miR156 and its target BnaSBP gene were observed in lines with different branch angle. Conclusions: Taken together, this study represents the first systematic analysis of the SBP-box gene family in Brassica napus. The data presented here provides base foundation for understanding the crucial roles of BnaSBP genes in plant development and other biological processes.
Data from: Genomic identification, characterization and differential expression analysis of SBP-box gene family in Brassica napus
Open the record for dataset details and reuse information.
RNA Sequencing Facilitates Quantitative Analysis of differentially expressed genes during human erythroipoiesis
GEO Series GSE119315. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Differential gene expression analysis between Miltefosine resistant and sensitive leishmania donovani
GEO Series GSE30685. Leishmania donovani; Leishmania. 6 samples. Type: Expression profiling by array.
Differential gene expression analysis of trisomy 21 and euploid hematopoietic progenitor cells derived from human pluripotent stem cells.
GEO Series GSE238115. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Network analysis of differentially expressed genes in a rat model of neonatal HI encephalopathy +/- antioxidant
GEO Series GSE18356. Rattus norvegicus. 12 samples. Type: Expression profiling by array.
Genome-wide analysis of differential gene expression in human embryonic stem cell-derived central nervous system, neural crest, and progenitor populations over time
GEO Series GSE45223. Homo sapiens. 36 samples. Type: Expression profiling by array.
Global gene expression analysis of undifferentiated H1 hESC, and hEB cells differentiated with SF BVF2H conditions
GEO Series GSE12531. Homo sapiens. 5 samples. Type: Expression profiling by array.
Gene expression analysis of hESCs undergoing neuronal differentiation [RNA-seq]
GEO Series GSE192855. Homo sapiens. 19 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide gene expression analysis for target genes to differentiate patients with intestinal tuberculosis and Crohn’s disease
GEO Series GSE26305. Homo sapiens. 6 samples. Type: Expression profiling by array.
Differential Gene Expression Analysis with Altered Local CRH Signaling in the Mouse Olfactory Bulb
GEO Series GSE98799. Mus musculus. 15 samples. Type: Expression profiling by array.
Statistical analysis of differential gene expression relative to a fold change threshold on NanoString data of mouse odorant receptor genes
GEO Series GSE53876. Mus musculus. 30 samples. Type: Other.
Analysis of differentially expressed genes between Huntington’s disease and control iPSCs derived GABA MS-like neurons
GEO Series GSE77558. Homo sapiens. 12 samples. Type: Expression profiling by array.
Quant-seq analysis of differential gene expression and polyadenylation site usages in caused by inhibition of CDK12 and CDK13 using THZ531 in THP-1 cells (3’ Quant-seq)
GEO Series GSE141376. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Effect of Cu-Nanoparticles versus Cu-salt in Enchytraeus albidus (Oligochaeta): differential gene expression through microarray analysis
GEO Series GSE26331. Enchytraeus albidus. 24 samples. Type: Expression profiling by array.
Mixed-species RNAseq analysis of human lymphoma cell adhesion to mouse stromal cells identifies a core gene set that is also differentially expressed in the lymph node microenvironment of MCL and CLL
GEO Series GSE99501. Mus musculus; Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of porcine peripheral blood reveals differentially expressed genes from the cytokine-cytokine receptor interaction pathway related to health status
GEO Series GSE96640. Sus scrofa. 64 samples. Type: Expression profiling by high throughput sequencing.
Differential gene expression analysis identified determinants of cell fate plasticity during radiation-induced regeneration in Drosophila
GEO Series GSE182782. Drosophila melanogaster. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.