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123
datasets available to search
ShareScore release 0.9.0
Dataset results
123 results for “hydroxymethylation”
Base-resolution DNA hydroxymethylation maps of purple sea urchin (Strongylocentrotus purpuratus), european lancelet (Branchiostoma lanceolatum) and zebrafish (Danio rerio) using ACE-seq
GEO Series GSE188331. Branchiostoma lanceolatum; Danio rerio; Strongylocentrotus purpuratus. 15 samples. Type: Other.
Gene body DNA hydroxymethylation restricts magnitude of transcriptional changes during aging [RNA-seq]
GEO Series GSE221123. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [Bisulfite-Seq]
GEO Series GSE87747. Mus musculus. 36 samples. Type: Methylation profiling by high throughput sequencing.
DNA methylation and hydroxymethylation assessment through 450K analysis of paired bisulfite and oxidative-bisulfite conversion.
GEO Series GSE71719. Homo sapiens. 46 samples. Type: Methylation profiling by genome tiling array.
Identification of fetal unmodified and 5-hydroxymethylated CGs in maternal cell-free DNA for non-invasive prenatal testing
GEO Series GSE148964. Homo sapiens. 42 samples. Type: Other; Methylation profiling by high throughput sequencing.
DNA hydroxymethylation profiling of paired parental and therapy resistant cancer cell lines
GEO Series GSE128685. Homo sapiens. 11 samples. Type: Methylation profiling by array.
Genome wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer
GEO Series GSE42723. Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing.
Dynamic interplay between locus-specific DNA methylation and hydroxymethylation regulates distinct biological pathways in prostate carcinogenesis
GEO Series GSE74464. Homo sapiens. 14 samples. Type: Methylation profiling by high throughput sequencing.
Genome-wide alterations of DNA methylation and hydroxymethylation in uroepithelial cells revealed potential carcinogenicity of halobenzoquinone disinfection byproducts [RNA-Seq]
GEO Series GSE301922. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide alterations of DNA methylation and hydroxymethylation in uroepithelial cells revealed potential carcinogenicity of halobenzoquinone disinfection byproducts [Bisulfite-Seq]
GEO Series GSE301936. Homo sapiens. 12 samples. Type: Methylation profiling by high throughput sequencing.
Integrated analyses of DNA methylation and hydroxymethylation reveal tumor suppressive roles of ECM1, ATF5 and EOMES in human hepatocellular carcinoma
GEO Series GSE54141. Homo sapiens. 36 samples. Type: Methylation profiling by high throughput sequencing.
Altered Ten Eleven Translocation Methylcytosine Dioxygenase Expression and DNA Hydroxymethylation in a Mouse Model of Prostate Cancer [RNA-seq]
GEO Series GSE279077. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Global distribution of DNA hydroxymethylation and DNA methylation in chronic lymphocytic leukemia
GEO Series GSE113386. Homo sapiens. 82 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Effect of obesity and dyslipidemia on DNA hydroxymethylation in human adipose-derived mesenchymal stem/stromal cells [Homo sapiens]
GEO Series GSE216948. Homo sapiens. 10 samples. Type: Methylation profiling by high throughput sequencing.
TET1-mediated DNA hydroxymethylation controlling ferroptosis resistance in cancer [ChIP-seq]
GEO Series GSE240526. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Altered Hydroxymethylation is seen at regulatory regions in pancreatic cancer and regulates oncogenic pathways
GEO Series GSE97018. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Trajectories of DNA hydroxymethylation across human brain development
GEO Series GSE94014. Homo sapiens. 142 samples. Type: Methylation profiling by genome tiling array.
TET1-mediated DNA hydroxymethylation controlling ferroptosis resistance in cancer [5hmC-seq]
GEO Series GSE240525. Homo sapiens. 6 samples. Type: Other.
Tet-dependent 5-hydroxymethyl-Cytosine modification of mRNA regulates the axon guidance genes robo2 and slit in Drosophila [ChIP LBF]
GEO Series GSE225970. Drosophila melanogaster. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
TET1 and 5-hydroxymethylation preserve the stem cell state of mouse trophoblast
GEO Series GSE139049. Mus musculus. 25 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.