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612 results for “imprinting”
Text-fig. 1. Megastriae and post mortem epicoles on Tragoceras falcatum (SCHLOTHEIM, 1820). Arrows and M1–M3 indicate megastriae, bryozoan colonies are indicated by B1 and B2. a: GIT 819-1, left lateral view; b: body chamber of GIT 819-1, dorsal view; c: body chamber of GIT 819-1, left lateral view; d: GIT 819-1, right lateral view; e: PIMUZ 37299, right lateral view; f: detail of the body chamber of GIT 819-1, right lateral view, encrusted by bryozoans; g: bryozoan colony with Trypanites borings growing on an older bryozoan crust GIT 819-1. Specimens oriented with aperture downwards. Scale bars 10 mm. in Conch Structures, Soft-Tissue Imprints And Taphonomy Of The Middle Ordovician Cephalopod Tragoceras Falcatum From Estonia
Text-fig. 1. Megastriae and post mortem epicoles on Tragoceras falcatum (SCHLOTHEIM, 1820). Arrows and M1–M3 indicate megastriae, bryozoan colonies are indicated by B1 and B2. a: GIT 819-1, left lateral view; b: body chamber of GIT 819-1, dorsal view; c: body chamber of GIT 819-1, left lateral view; d: GIT 819-1, right lateral view; e: PIMUZ 37299, right lateral view; f: detail of the body chamber of GIT 819-1, right lateral view, encrusted by bryozoans; g: bryozoan colony with Trypanites borings growing on an older bryozoan crust GIT 819-1. Specimens oriented with aperture downwards. Scale bars 10 mm.
Text-fig. 19. Scanning electron microscope (SEM; d, e) and synchrotron radiation X-ray tomographic microscopy (SRXTM; a–c) images of a seed of Kvacekispermum costatum sp. nov. (a–c) and Kvacekispermum sp. (d, e); Torres Vedras locality, Portugal. a, b) Isolated, abraded seeds showing densely spaced longitudinal ridges; c) Detail of abraded seed in (b) showing surface of endotesta with imprints of crystals; d) Isolated, abraded seed showing longitudinal ridges; e) Abraded seed surface showing surface of endotesta with imprints of crystals. Specimens, TV44-S174098 (holotype; a), TV38-S174099 (b, c), TV43-S174612 (d, e). Scale bars 300 Μm (a, b, d), 50 Μm (c, e). in The Early Cretaceous Mesofossil Flora Of Torres Vedras (Ne Of Forte Da Forca), Portugal: A Palaeofloristic Analysis Of An Early Angiosperm Community
Text-fig. 19. Scanning electron microscope (SEM; d, e) and synchrotron radiation X-ray tomographic microscopy (SRXTM; a–c) images of a seed of Kvacekispermum costatum sp. nov. (a–c) and Kvacekispermum sp. (d, e); Torres Vedras locality, Portugal. a, b) Isolated, abraded seeds showing densely spaced longitudinal ridges; c) Detail of abraded seed in (b) showing surface of endotesta with imprints of crystals; d) Isolated, abraded seed showing longitudinal ridges; e) Abraded seed surface showing surface of endotesta with imprints of crystals. Specimens, TV44-S174098 (holotype; a), TV38-S174099 (b, c), TV43-S174612 (d, e). Scale bars 300 Μm (a, b, d), 50 Μm (c, e).
Motor usage imprints microtubule stability on the shaft - Western blots
<p>Original western blot images that have been used in Andreu-Carbo et al, Motor usage imprints microtubule stability on the shaft, bioRxiv, 10.1101/2021.04.09.439170. For details see the paper.</p>
Text-fig. 19. Synchrotron radiation X-ray tomographic microscopy (SRXTM, a–c) of Aristospermum huberi and scanning electron microscope (SEM, d, e) images of Choffaticarpus compactus; Catefica locality, Portugal. a) Volume rendering of strongly flattened, triangular seed with pointed micropylar region; note thin-walled cells of outer integument preserved along the margins of the seed and pitted surface of the crystalliferous inner cells of outer integument where the outer cells are abraded and the narrow, lateral funicle/raphe; b) Volume rendering of seed showing surface of inner integument (endotesta) with cells showing clear imprints of crystals (arrows); c) Longitudinal section (orthoslice yz0241) of seed showing crystalliferous cells of endotesta (white arrows) and the two fiber layers of the tegmen that are perpendicular to each other (inner integument, ii-f, black arrows); d) Fragment of multiparted, apocarpous fruiting structure showing several helically-arranged, laterally flattened, fruitlets; e) Fruitlet in lateral view showing the prominent ventral face with its lateral groove, short attachment scar, and sunken regions of the fruit wall that indicate the probable presence of oil cells. Specimens, Catefica 49-S266049 (a–c), Catefica 49-S172558 (d), Catefica 49-S118675 (e). Scale bars = 300 Μm (a, c–e), 100 Μm (b). in The Early Cretaceous Mesofossil Flora Of Catefica, Portugal: Angiosperms
Text-fig. 19. Synchrotron radiation X-ray tomographic microscopy (SRXTM, a–c) of Aristospermum huberi and scanning electron microscope (SEM, d, e) images of Choffaticarpus compactus; Catefica locality, Portugal. a) Volume rendering of strongly flattened, triangular seed with pointed micropylar region; note thin-walled cells of outer integument preserved along the margins of the seed and pitted surface of the crystalliferous inner cells of outer integument where the outer cells are abraded and the narrow, lateral funicle/raphe; b) Volume rendering of seed showing surface of inner integument (endotesta) with cells showing clear imprints of crystals (arrows); c) Longitudinal section (orthoslice yz0241) of seed showing crystalliferous cells of endotesta (white arrows) and the two fiber layers of the tegmen that are perpendicular to each other (inner integument, ii-f, black arrows); d) Fragment of multiparted, apocarpous fruiting structure showing several helically-arranged, laterally flattened, fruitlets; e) Fruitlet in lateral view showing the prominent ventral face with its lateral groove, short attachment scar, and sunken regions of the fruit wall that indicate the probable presence of oil cells. Specimens, Catefica 49-S266049 (a–c), Catefica 49-S172558 (d), Catefica 49-S118675 (e). Scale bars = 300 Μm (a, c–e), 100 Μm (b).
The central nervous system's proteogenomic and spatial imprint upon systemic viral infection, like SARS-CoV-2
<p>Data set including image files of histological stainings, immunohistochemistry, MELC, and spatial transcriptomics associated with the study mentioned above.</p>
Bioverse: The Habitable Zone Inner Edge Discontinuity as an Imprint of Runaway Greenhouse Climates on Exoplanet Demographics
<p>This repository contains data required to run the <a href="https://github.com/matiscke/hz-inner-edge-discontinuity">pipeline producing the results and figures in Schlecker+2023</a>, in particular results objects created with expensive model grid runs of <a href="https://github.com/danielapai/bioverse">Bioverse</a>.</p>
Varying genetic imprints of roads and human density in North American mammal populations
Open the record for dataset details and reuse information.
Imprints of latitude, host taxon and decay stage on fungus-associated arthropod communities
Open the record for dataset details and reuse information.
Evaluation of the impact of imprinted polymer particles on morphology and motility of breast cancer cells by using digital holographic cytometry
<p>Supplemented Videos used in "Evaluation of the impact of imprinted polymer particles on morphology and motility of breast cancer cells by using digital holographic cytometry"</p>
A novel method for using RNA-seq data to identify imprinted genes in social Hymenoptera with multiply mated queens
<p>Genomic imprinting results in parent-of-origin dependent gene expression biased towards either the maternally- or paternally-derived allele at the imprinted locus. The kinship theory of genomic imprinting argues that this unusual expression pattern is a manifestation of intra-genomic conflict between the maternally- and paternally-derived halves of the genome that arises because they are not equally related to the genomes of social partners. The theory thus predicts that imprinting may evolve wherever there are close interactions among asymmetrically related kin. The social Hymenoptera with permanent caste differentiation are suitable candidates for testing the kinship theory because haplodiploid sex determination creates strong relatedness asymmetries and nursing workers interact closely with kin. However, progress in the search for imprinted genes in the social Hymenoptera has been slow, in part because tests for imprinting rely on reciprocal crosses that are impossible in most species. Here, we develop a method to systematically search for imprinting in haplodiploid social insects without crosses, using instead samples of pooled individuals collected from natural colonies. We tested this protocol using data available for the leaf-cutting ant <i>Acromyrmex echinatior</i>, providing the first genome-wide search for imprinting in any ant. While we identified several genes as potentially imprinted, none of the four genes tested could be verified as imprinted using digital droplet PCR, highlighting the need for higher quality genomic assemblies that accurately map duplicated genes.</p>
Weak founder effects but significant spatial genetic imprint of recent contraction and expansion of European beech populations.
Understanding the ecological and evolutionary processes occurring during species range shifts is important in the current context of global change. Here, we investigate the interplay between recent expansion, gene flow and genetic drift, and their consequences for genetic diversity and structure at landscape and local scales in European beech (Fagus sylvatica L.) On Mont Ventoux, South-Eastern France, we located beech forest refugia at the time of the most recent population minimum, approximately 150 years ago, and sampled 71 populations (2042 trees) in both refugia and expanding populations over an area of 15,000 ha. We inferred patterns of gene flow and genetic structure using 12 microsatellite markers. We identified six plots as originating from planting, rather than natural establishment, mostly from local genetic material. Comparing genetic diversity and structure in refugia versus recent populations did not support the existence of founder effects: heterozygosity (He = 0.667) and allelic richness (Ar = 4.298) were similar, and FST was low (0.031 overall). Still, significant spatial evidence of colonization was detected, with He increasing along the expansion front, while genetic differentiation from the entire pool (βWT) decreased. Isolation by distance was found in refugia but not in recently expanding populations. Our study indicates that beech capacities for colonization and gene flow were sufficient to preserve genetic diversity despite recent forest contraction and expansion. Because beech has long distance pollen and seed dispersal, these results illustrate a 'best case scenario' for the maintenance of high genetic diversity and adaptive potential under climate-change related range change.
Data from: Evidence of stress imprinting with population-level differences in two moss species
Plants are often repeatedly exposed to stresses during their lives and have a mechanism called stress imprinting that provides 'memories' of stresses they experience and increases their ability to cope with later stresses. To test hypotheses that primed bryophytes can preserve their stress imprinting after 6 days of recovery and induce higher levels of osmolytes and ROS-scavenging activities upon later stress exposure, and there exist population-level differentiation in their desiccation defenses, we transplanted samples of two populations of each of two moss species, Hypnum plumaeforme and Pogonatum cirratum, in a nature reserve in southern China. After 16 months of acclimation, sets of each population were subjected to control, one-time desiccation stress, duplicated desiccation stress and cross-stress (low temperature stress followed by desiccation stress) treatments. Levels of oxidant enzymes, osmolytes and phytohormones in the samples were then determined. The desiccation stress generally led to increases in activities or contents of superoxide dismutase, guaiacol peroxidase, catalase, proline, soluble sugars, soluble proteins, and stress hormones including abscisic acid (ABA), jasmonates (JA) and salicylic acid (SA), with differences between both species and populations. After a 6-day recovery period, contents of phytohormones (including ABA, JA, SA and cytokinins) in stressed H. plumaeforme had substantially fallen towards control levels. The duplicated and cross-stress treatments generally led to further accumulation of proline, soluble sugars and soluble proteins, with further increases in activities of antioxidant enzymes in some cases. Furthermore, significant differences between allochthonous and native populations were found in contents of malondialdehyde and osmolytes, as well as antioxidant enzyme activities. Our results confirm the hypotheses, and highlight the importance of osmolytes in mosses' stress responses.
Carboniferous Pecopteris Leaf Fossil Imprint
Fossil of Pecopteris leaf Imprint from the Pennsylvanian. Francis Creek Shale, Illinois, Kankakee Canon EOS 80D, 35mm, F/16, ISO 100, Agisoft Metashape, Windows 10. Source: Objaverse 1.0 / Sketchfab
Comparing plasma and skin imprint metabolic profiles in COVID-19 diagnosis and severity assessment_dataset
<p>As SARS-CoV-2 continues to produce new variants, the demand for diagnostics and a better understanding of COVID-19 remain key topics in healthcare. Skin manifestations have been widely reported in cases of COVID-19, but the mechanisms and markers of these symptoms are poorly described. In this cross-sectional study, 101 patients (64 COVID-19 positive patients and 37 controls) were enrolled between April and June 2020, during the first wave of COVID-19, in São Paulo, Brazil. Enrolled patients had skin imprints sampled non-invasively using silica plates; plasma samples were also collected. Samples were used for untargeted lipidomics/metabolomics through high-resolution mass spectrometry. We identified 558 molecular ions, with lipids comprising most of them. We found 245 plasma ions that were significant for COVID-19 diagnosis, compared to 61 from the skin imprints. Plasma samples outperformed skin imprints in distinguishing patients with COVID-19 from controls, with F1-scores of 91.9% and 84.3%, respectively. Skin imprints were excellent for assessing disease severity, exhibiting an F1-score of 93.5% when discriminating between patient hospitalization and home care statuses. Specifically, oleamide and linoleamide were the most discriminative biomarkers for identifying hospitalized patients through skin imprinting, and palmitic amides and N-acylethanolamine 18:0 were also identified as significant biomarkers. These observations underscore the importance of primary fatty acid amides and N-acylethanolamines in immunomodulatory processes and metabolic disorders. These findings confirm the potential utility of skin imprinting as a valuable non-invasive sampling method for COVID-19 screening; a method that may also be applied in the evaluation of other medical conditions.</p><p>Journal of Molecular Medicine https://doi.org/10.1007/s00109-023-02396-3</p>
Imprinting on time-structured acoustic stimuli in ducklings
<p><span><span><span><span><span><span><span><span><span><span><span>Filial imprinting is a dedicated learning process that lacks explicit reinforcement. The phenomenon itself is narrowly heritably canalized, but its content, the representation of the parental object, reflects the circumstances of the newborn. Imprinting has recently been shown to be even more subtle and complex than previously envisaged, since ducklings and chicks are now known to select and represent for later generalization abstract conceptual properties of the objects they perceive as neonates, including movement pattern, heterogeneity, and inter-component relationships of same or different. Here we investigate day-old Mallard (<i>Anas platyrhynchos</i>) ducklings' bias towards imprinting on acoustic stimuli made from mallards' vocalizations as opposed to white noise, whether they imprint on the temporal structure of brief acoustic stimuli of either kind, and whether they generalize timing information across the two sounds. Our data are consistent with a strong innate preference for natural sounds, but do not reliably establish sensitivity to temporal relations. This fits with the view that imprinting includes the establishment of representations of both primary percepts and selective abstract properties of their early perceptual input, meshing together genetically transmitted prior predispositions with active selection and processing of the perceptual input.</span></span></span></span></span></span></span></span></span></span></span></p>
Variable allelic expression of imprinted genes at the Peg13, Trappc9, Ago2 cluster in single neural cells
<p>Fig 1 5' RACE - Sequence tracks and analysis of alternative Trappc9 transcriptional start sites</p> <p>Fig 2 and suppl fig 3- Brain and Kidney tissue or Neural stem cells isolated from the Hippocampus region of newborn mice generated from a C57BL/6 (female) and a Cast/EiJ (male) cross (and its reciprocal cross) was used to determine allelic bias expression. A SNP located within an exon of Peg13, Trappc9, Ago2, Chrac1 and Kcnk9 was identified and amplified via pyrosequencing PCR with the percentage of SNP identification used to determine allele expression percentages. Additionally, Pyrorun sequences of reverse transcribed RNA from Trappc9 expression in different tissues. A hybrid cross between C57BL/6 and JF1 mouse was used to generate hybrid pups that were used to determine allele specificity of Trappc9 expression in Kidney and brain tissues.</p> <p>Figs 3, 4 & 5- Single neural stem cells were isolated from the Hippocampus of newborn mice generated from a hybrid cross. Some of these cells were differentiated In vitro and either the NSC or differentiated neurons were lysed and underwent a reverse transcription. The newly formed cDNA was used as a template to amplify expressed Peg13, Trappc9 or Ago2 transcripts which was then sent for Sanger sequencing. A SNP located within the exon was used to determine whether the transcript from that cell was generated from the maternal or paternal allele.</p> <p>Fig 6- Brain-specific regulatory elements were cloned into a pGL [Luc] vector containing a Trappc9 promoter. These newly generated plasmids were then transfected into either primary neuron or fibroblast cultures alongside a Renilla vector for normalization using Lipofectamine as a transfection reagent. After 48 hours the cells were lysed and analyzed using a Glomax illuminator to determine their impact on Luciferase expression compared to that of the pGL vector containing just the Trappc9 promoter. Additionally, Plasmid vectors that were used for transfection of primary neurons to determine the impact of brain-specific regulatory elements on transcription. Plasmids can be visualized using the free software pdraw.32 downloaded from http://acaclone.com/download/install.htm</p> <p>Suppl fig 2- Single Neural stem cells and in vitro differentiated neurons isolated from Mouse Hippocampus tissue underwent reverse transcription and a qPCR reaction intended to amplify cDNA of genes associated with specific neural cell types as a method of detecting cell fate and whether this had an impact on allele-specific expression and differential methylation.</p> <p>Suppl fig 4 & 5- DNA isolated from Neural stem cells was bisulfite converted for downstream identification of methyl group presence. CpG islands located at or near the promoters of the Peg13, Trappc9, Ago2, Chrac1 and Kcnk9 genes were amplified and cloned into a TOPO vector. The cloned segments were Sanger sequenced and compared to the original non-bisulfite converted sequence using the Quantification for methylation analysis (QUMA) tool to determine which CG dinucleotides were methylated and which weren't. Pyroruns determining methylation frequency at the CpG islands of these genes can be found in a separate upload on Zenodo.</p>
Source Data for 'The imprint of star formation on stellar pulsations'
<p>This repository holds the source data and plotting routines for all Figures and Tables of the artice 'The imprint of star formation on stellar pulsations'.</p> <p><a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/source_data.zip">source_data.zip </a>holds the source data. Each file provides a data set. Different data sets used in this publication are i.e. one parameter of a evolutionary track (i.e. 2Msun_classic_history_star_age.txt), one parameter of a structure model (i.e. 2Msun_classic_different_ov_profile_zams_mass.txt), or one parameter of a theoretical frequency set (i.e. GYRE_summary_classic_pre_ms_stage_n_pg.txt). All files have one column and are directly loaded in <a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/plot_utils.py">plot_utils.py </a>.</p> <p><a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/plot_utils.py">plot_utils.py </a>holds the plotting Routines for Figures 1-7 and Figures A1-A43.</p> <p><a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/figures.py">figures.py </a>executes the plotting routines from <a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/plot_utils.py">plot_utils.py</a>.</p> <p><a href="https://zenodo.org/api/files/2ff2ea54-edc1-4fdc-9af8-4f839fbb089e/Figures.zip">Figures.zip </a>holds the resulting Figures.<br> </p> <p>Requirements to execute the plotting routines are:</p> <pre>Python 3.7.5 numpy 1.19.5 matplotlib 3.3.3 pandas 1.2.2 cmcrameri 1.4 scipy 1.2.3 seaborn 0.11.1</pre>
Streptococcus pyogenes pharyngitis elicits diverse antibody responses to key vaccine antigens influenced by the imprint of past infections.
<p>Here you will find the raw data (RawData.RData) and code (CHIVAS_SEROLOGY_Code.Rmd, an R Markdown file) for generating the analysis and figures for the following publication:</p> <p><strong><em>Streptococcus pyogenes</em> pharyngitis elicits diverse antibody responses to key vaccine antigens influenced by the imprint of past infections.</strong></p> <p>Joshua Osowicki1,2,3 #, Hannah R Frost1 #, Kristy I Azzopardi1, Alana L Whitcombe4, Reuben McGregor4, Lauren H. Carlton4, Ciara Baker1, Loraine Fabri1,5,6, Manisha Pandey7, Michael F Good7, Jonathan R. Carapetis8,9,10, Mark J Walker11,12,13, Pierre R Smeesters1,2,5,6, Paul V Licciardi2,14, Nicole J Moreland4 *, Danika L Hill15 *, Andrew C Steer1,2,3 *</p> <p>Provided in the RData file are the following items: </p> <p><strong>Dataframes: </strong></p> <p>"outcome" : clinical variables associated with human challenge for each participant</p> <p>"data" : ELISA and functional antibody responses for human challenge participants. Each timepoint and isotype for each antigen as seperate column)</p> <p>"data_long": Data equivalent to "data" file but in long format, i.e. One column for each antigen, timepoint and isotype as factors. </p> <p>"data.melt" : Data equivalent to "data" file but in longer format , i.e. timepoint, isotype and antigen as factors, 'value' as ELISA AU. </p> <p>"luminex" : IgG responses to 6 antigens analysed by luminex bead-based assay in human challenge participants.</p> <p>"luminex.children" : IgG responses to 6 antigen analysed by luminex bead-based assay in children</p> <p><strong>Vectors:</strong></p> <p>"pharyngitis" : participant "id" for the 19 individuals that developed pharyngitis. </p> <p>"Antigen.Order" : relates to "Main" antigen classification used in Figure 2</p> <p>'additional" : relates to "Additional </p> <p><strong>Function: </strong></p> <p>"custom_theme" : used as a theme when using ggplot to graph. </p> <p>Adobe Illustrator or Inkscape were used to generate the final image files for publication, with some graph editing to axes labels, font size, adding p-values etc. </p> <p> </p> <p><em><strong>Additional files: </strong></em></p> <p> 3 .csv files have been included for download</p> <p>"ELISA_data_wide_format.csv", a wide format data table of 25 human challenge individuals and 219 variables. Equivalent to the 'data' dataframe in the RData file</p> <p>"CHIVAS_luminex.csv", a long format data table of 25 human challenge participants at 1 week, 1 month, and 3 months. Equivalent to the 'luminex' dataframe in the RData file. </p> <p>"Luminex.children.csv", a datatable of 6 luminex variables for 39 children (healthy and post pharyngitis). Equivalent to the 'luminex.children' dataframe in the RData file. </p> <p> </p>
Gravitational Wave Memory Imprints on the CMB from Populations of Massive Black Hole Mergers
<p>Visualisation videos of the effect of gravitational wave (GW) memory onto photons from the cosmic microwave background (CMB).</p>
Imprint of planet formation in the deep interior of the Sun
<p>In protoplanetary disks, the growth and inward drift of dust lead to the generation of a temporal ``pebble wave'' of increased metallicity. This phase must be followed by a phase in which the exhaustion of the pebbles in the disk and the formation of planets lead to the accretion of metal-poor gas. At the same time, disk winds may lead to the selective removal of hydrogen and helium from the disk. Hence, stars grow by accreting gas that has an evolving composition. In this work, we investigated how the formation of the Solar System may have affected the composition and structure of the Sun, and whether it plays any role in solving the so-called solar abundance problem, that is, the fact that standard models with up-to-date lower-metallicity abundances reproduce helioseismic constraints significantly more poorly than those with old higher-metallicity abundances. We simulated the evolution of the Sun from the protostellar phase to the present age and attempted to reproduce spectroscopic and helioseismic constraints. We performed chi-squared tests to optimize our input parameters, which we extended by adding secondary parameters. These additional parameters accounted for the variations in the composition of the accreted material and an increase in the opacities. We confirmed that, for realistic models, planet formation occurs when the solar convective zone is still massive; thus, the overall changes due to planet formation are too small to significantly improve the chi-square fits. We found that solar models with up-to-date abundances require an opacity increase of 12% to 18% centered at T = 10^6.4 K to reproduce the available observational constraints. This is slightly higher than, but is qualitatively in good agreement with, recent measurements of higher iron opacities. These models result in better fits to the observations than those using old abundances; therefore, they are a promising solution to the solar abundance problem. Using these improved models, we found that planet formation processes leave a small imprint in the solar core, whose metallicity is enhanced by up to 5%. This result can be tested by accurately measuring the solar neutrino flux. In the improved models, the protosolar molecular cloud core is characterized by a primordial metallicity in the range Zproto = 0.0127-0.0157 and a helium mass fraction in the range Yproto = 0.268-0.274.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.