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Data from: Oxidative status: A general but overlooked indicator of welfare across animal species?
<p>Datasets resulting from the review process aiming to quantify the use of markers of oxidative status in animal welfare studies and in adjacent fields focused on wild animals (ecophysiology, conservation physiology). Datasets used for the metanalyses aiming to examine variation in markers of oxidative status across three conditions associated with a negative valence (social isolation, noise exposure, predation exposure).</p>
Figure 1. Heat map indicating the cumulative percent seed shatter across the participating states for a in Seed-shattering phenology at soybean harvest of economically important weeds in multiple regions of the United States. Part 1: Broadleaf species
Figure 1. Heat map indicating the cumulative percent seed shatter across the participating states for a window starting from soybean physiological maturity to 4 wk past maturity in 2016 and 2017. States were included in these maps only if they conducted sampling during the week indicated (e.g., In 2017, Arkansas sampled on October 2, October 18, and November 3, none of which are within ±3 d of the October 10 maturity date or maturity þ2 wk on October 24 in the state that year. Hence only data from maturity þ3 wk are for Arkansas for 2017.)
Figure 1. Heat map indicating the cumulative percent seed shatter across the participating states for a in Seed-shattering phenology at soybean harvest of economically important weeds in multiple regions of the United States. Part 2: Grass species
Figure 1. Heat map indicating the cumulative percent seed shatter across the participating states for a window starting from soybean physiological maturity to 4 wk past physiological maturity in 2016 and 2017. States were included in these maps only if they conducted sampling during the week indicated. (e.g., In 2017, Arkansas sampled on October 2, October 18, and November 3, none of which are within ±3 d of the October 10 maturity date or maturity +2 wk on October 24 in the state that year. Hence only data from maturity +3 wk are for Arkansas for 2017.)
Fig. 5 in Using spatial indicators to investigate fish spawning strategies from ichthyoplankton surveys: A case study on co-occurring pelagic species from the North-East Aegean Sea Abstract
Fig. 5: Distribution and abundance maps of eggs during May (A, B) and July 2010 (C-E), in the NE Aegean Sea. The major patches are indicated by different colours, while the size of the circles is scaled by the maximum abundance per species and period (Table 2). The number of each patch indicates the ranking according to the abundance of individuals in each patch. The small black cross symbols show the centres of gravity (CG) of each major patch (i.e. those patches having more than 10% of the overall abundance; Table 3). The large cross indicates the CG of the population. The length of the cross axes indicate the isotropy of the egg distribution. The 200m isobaths are also shown (dark contour line).
Fig. 4 in Using spatial indicators to investigate fish spawning strategies from ichthyoplankton surveys: A case study on co-occurring pelagic species from the North-East Aegean Sea Abstract
Fig. 4: Box-and-whisker plots for temperature (oC; at 10 m depth), salinity (at 10 m depth), log-transformed integrated fluorescence (μg l-1) and log-transformed mesozooplankton biomass (mg m-2) between three groups of sampling stations: L – Lemnos plateau, O – offshore pelagic area north of Lemnos island, and T- Thracian Sea shelf. Boxes indicate median and interquartile ranges, whiskers delineate full ranges. F-values are provided for comparisons of the parameters between the three groups (L, O, T) and within each season. For comparisons that did not meet the assumptions of the analysis of variance, the Kruskal-Wallis statistic H is provided. Asterisks indicate significant differences: *p <0.05, **p <0.01, ***p <0.001. Post-hoc multiple comparisons were performed with a Student-Newman-Keul's test, where statistically significant differences among groups are indicated by letters a, b, c on the left side of each box. Groups with the same letter do not differ significantly.
Fig. 3 in Using spatial indicators to investigate fish spawning strategies from ichthyoplankton surveys: A case study on co-occurring pelagic species from the North-East Aegean Sea Abstract
Fig. 3: Contour maps of the vertical distribution of temperature (oC; left column), salinity (middle column) and fluorescence (μg Chlα l-1; right column) during May 2010 along transect A (A-C) and transect B (D-F), and during July 2010 along transects A (H-J) and B (K-M). Y-axis: depth of the water column; X-axis: distance (nmi) from the northern sampling station (0 nmi) to the southern station. The position (distance, nmi) of the sampling stations along the transects are shown in white, dashed lines on top of the temperature contour maps.
Fig. 2 in Using spatial indicators to investigate fish spawning strategies from ichthyoplankton surveys: A case study on co-occurring pelagic species from the North-East Aegean Sea Abstract
Fig. 2: Temperature (oC, 10 m depth; A, E), salinity (10 m; B, F), integrated fluorescence (μg Chl-a l-1, 0-100 m; C, G) and mesozooplankton biomass (mg m-2; D, H) during May (A-D) and July 2010 (E-H) in the study area.
Fig. 1 in Using spatial indicators to investigate fish spawning strategies from ichthyoplankton surveys: A case study on co-occurring pelagic species from the North-East Aegean Sea Abstract
Fig. 1: Ichthyoplankton (shown as open red circles) and CTD sampling stations (shown as filled red circles) during May and July 2010. The isobaths of 100 and 200 m are shown (light and dark blue lines, respectively). Black arrows indicate the main circulation pattern in the area: LIS - Lemnos-Imvros stream, SG - Samothraki gyre (Somarakis et al., 2002). The sampling stations of transects A and B (grey lines) show the vertical structure of the water column in Figure 3.
Рис. 1. Карта-схема распоΛожения станций отбора проб на р. Амазар Fig.1. Location of sampling stations on the Amazar River in Species Composition And Quantitative Indicators Of Rotifers And Crustaceans In The Middle And Lower Streams Of The Amazar River (Zabaikalskiy Kray)
Рис. 1. Карта-схема распоΛожения станций отбора проб на р. Амазар Fig.1. Location of sampling stations on the Amazar River
Рис. 3. Схема миграций виΑов рыб, участвующих в современной Αинамике ихтиофауны на территории НТТ: 1 — разΛивы; 2 — намывы. Черным цветом обозначены направΛения миграций из реки Туманной; красным — из оз. Хасан и РазΛивов; синим — с мест зимовки в реках южного Приморья; зеΛеным — сезонные миграции из южных морей Fig. 3. Scheme of migration of fish species involved in the modern dynamics of ichthyofauna on the territory of LRT: 1 — spills; 2 — alluvial. Black color indicates the direction of migration from the Tumannaya river; red — from lake Khasan and spills; blue — from wintering places in the rivers of southern Primorye; green — seasonal migration from the south seas in Transboundary Migration And The Local Constraints In The Dynamic Of Fish Fauna In The Lower Reaches Of Tumannaya River
Рис. 3. Схема миграций виΑов рыб, участвующих в современной Αинамике ихтиофауны на территории НТТ: 1 — разΛивы; 2 — намывы. Черным цветом обозначены направΛения миграций из реки Туманной; красным — из оз. Хасан и РазΛивов; синим — с мест зимовки в реках южного Приморья; зеΛеным — сезонные миграции из южных морей Fig. 3. Scheme of migration of fish species involved in the modern dynamics of ichthyofauna on the territory of LRT: 1 — spills; 2 — alluvial. Black color indicates the direction of migration from the Tumannaya river; red — from lake Khasan and spills; blue — from wintering places in the rivers of southern Primorye; green — seasonal migration from the south seas
Fig. 3. Tallies within each Tennessee county indicate the total buprestid species recorded from specimen label records spanning 1934 in Seasonal flight activity and distribution of metallic woodboring beetles (Coleoptera: Buprestidae) collected in North Carolina and Tennessee
Fig. 3. Tallies within each Tennessee county indicate the total buprestid species recorded from specimen label records spanning 1934 to 2013. When presented across Tennessee, species yields indicate areas of greatest and least collection activity and highlight regions of future collection interest. This figure is displayed in color online at http://purl.fcla.edu/fcla/entomologist/browse
Fig. 2. Tallies within each North Carolina county indicate the total buprestid species recorded from specimen label records spanning 1901 in Seasonal flight activity and distribution of metallic woodboring beetles (Coleoptera: Buprestidae) collected in North Carolina and Tennessee
Fig. 2. Tallies within each North Carolina county indicate the total buprestid species recorded from specimen label records spanning 1901 to 2013. When presented across North Carolina, species yields indicate areas of greatest and least collection activity and highlight regions of future collection interest. This figure is displayed in color online at http://purl.fcla.edu/fcla/entomologist/browse
◂Fig. 4 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A–R light microscopy; TS in horizontal orientation). A Secantial section. B, C TS %note cellular organisation). D Secantial section. E, F TS %note cellular organisation). G Secantial section of young gynoecium showing cellular organisation. H–J TS %note lacking cellular organisation, localisation in K–M). K–M LS at different levels from outside to inside of the same specimen %note strongly stained peripheral tissue; asterisks indicate tissue illustrated in H–J). N TS %note dehiscence lines of the prospective endocarp). O, P TS showing transmission tissue and dorsal bundles at top of style. Q vascularisation at base of gynoecium %note strongly stained peripheral tissue). R Vascularisation at base of flower %LS, longisection; TS, transverse section; db, dorsal bundle; dl, dehiscent line; ep, epidermis; lb, lateral bundle; tt, transmission tissue; ut, peripheral tissue; vb, ventral bundle; vs, ventral slit) in Observations on flower and fruit anatomy in dioecious species of Cordia (Cordiaceae, Boraginales) with evolutionary interpretations
◂Fig. 4 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A–R light microscopy; TS in horizontal orientation). A Secantial section. B, C TS %note cellular organisation). D Secantial section. E, F TS %note cellular organisation). G Secantial section of young gynoecium showing cellular organisation. H–J TS %note lacking cellular organisation, localisation in K–M). K–M LS at different levels from outside to inside of the same specimen %note strongly stained peripheral tissue; asterisks indicate tissue illustrated in H–J). N TS %note dehiscence lines of the prospective endocarp). O, P TS showing transmission tissue and dorsal bundles at top of style. Q vascularisation at base of gynoecium %note strongly stained peripheral tissue). R Vascularisation at base of flower %LS, longisection; TS, transverse section; db, dorsal bundle; dl, dehiscent line; ep, epidermis; lb, lateral bundle; tt, transmission tissue; ut, peripheral tissue; vb, ventral bundle; vs, ventral slit)
◂Fig. 3 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A, B stack shot images; C–K light microscopy; G polarised light; TS in horizontal orientation). A, B Anthetic female flower, calyx and corolla partly removed. B LS of gynoecium. C LS of functionally female flower %note strongly stained peripheral tissue of corolla, anther and gynoecium). D LS of gynoecium. E, F TS of functionally female flower %note strongly stained, peripheral tissue). G TS of functionally female flower %note crystal deposition). H LS of ovule %note stalked embryo sac). J TS of functionally male flower with non-functional ovules. K LS of functionally male flower %style lacking, original position indicated by an asterisk) %LS, longisection; TS, transverse section; a,anther; bs, basal septum; c, calyx; car, carpel; co, corolla; db, dorsal bundles; es, embryo sac; fs, false septum; lb, lateral bundles; o, ovule; stg, stigma; sty, style; t, trichomes; tt, transmission tissue; ut, peripheral, strongly stained tissue; vb, ventral bundles; vs, ventral slit) in Observations on flower and fruit anatomy in dioecious species of Cordia (Cordiaceae, Boraginales) with evolutionary interpretations
◂Fig. 3 Gynoecium of C. crenata %yellow frames), C. cf. grandicalyx %blue frames) and C. sinensis %pink frames; A, B stack shot images; C–K light microscopy; G polarised light; TS in horizontal orientation). A, B Anthetic female flower, calyx and corolla partly removed. B LS of gynoecium. C LS of functionally female flower %note strongly stained peripheral tissue of corolla, anther and gynoecium). D LS of gynoecium. E, F TS of functionally female flower %note strongly stained, peripheral tissue). G TS of functionally female flower %note crystal deposition). H LS of ovule %note stalked embryo sac). J TS of functionally male flower with non-functional ovules. K LS of functionally male flower %style lacking, original position indicated by an asterisk) %LS, longisection; TS, transverse section; a,anther; bs, basal septum; c, calyx; car, carpel; co, corolla; db, dorsal bundles; es, embryo sac; fs, false septum; lb, lateral bundles; o, ovule; stg, stigma; sty, style; t, trichomes; tt, transmission tissue; ut, peripheral, strongly stained tissue; vb, ventral bundles; vs, ventral slit)
◂Fig.15 Scanning electron micrographs (SEM) showing transverse rows of dentition on Dinaride Zospeum and Iberozospeum radulae; (a) Z. pretneri, (NMBE 553290), Gornja Cerovačka pećina, Croatia, transverse rows of teeth on long, slender basal plates (bp), rachidian (r) and lateral teeth (l), arrows indicate medial grooves on mesocones of individual teeth; (b) Z. isselianum, NMBE 553389, Turjeva jama, Slovenia, ibid.; (c) Iberozospeum sp. (RMNH.MOL.234,116), Cueva a Sul, straight transverse rows of small, seemingly bi-cuspid lateral teeth (l) with reduced mesocones on compact basal plates; (d) ibid., close up view of rachidian teeth (r), lateral fang-like teeth (l) and transitional teeth (t); (e) I. vasconicum, (AJC 1848), Cueva Ermita de Sandaili, rachidian teeth (r) flanked by 4-cuspid lateral teeth (l), C. ibazoricum-like in form; (f) Iberozospeum sp. (RMNH. MOL.234108), Cueva la Torcona, lateral teeth showing reduced mesocones (me) flanked by long, fang-like endo- and ectocones (e), rachidian tooth (r) (flipped over in upper righthand corner of image); (g) I. zaldivarae (AJC 1876a), Cueva de Las Paúles, transverse rows of teeth showing varying cusp lengths; (h) ibid., close up view (left to right) of marginal (m) and transitional teeth (t) on short, compact basal plates (bp). — Magnification varies for each perspective, see scale bars; all Figs taken by M. Ruppel, (ret.) Goethe University Frankfurt am Main in Molecular investigation and description of Iberozospeum n. gen., including the description of one new species (Eupulmonata, Ellobioidea, Carychiidae)
◂Fig.15 Scanning electron micrographs (SEM) showing transverse rows of dentition on Dinaride Zospeum and Iberozospeum radulae; (a) Z. pretneri, (NMBE 553290), Gornja Cerovačka pećina, Croatia, transverse rows of teeth on long, slender basal plates (bp), rachidian (r) and lateral teeth (l), arrows indicate medial grooves on mesocones of individual teeth; (b) Z. isselianum, NMBE 553389, Turjeva jama, Slovenia, ibid.; (c) Iberozospeum sp. (RMNH.MOL.234,116), Cueva a Sul, straight transverse rows of small, seemingly bi-cuspid lateral teeth (l) with reduced mesocones on compact basal plates; (d) ibid., close up view of rachidian teeth (r), lateral fang-like teeth (l) and transitional teeth (t); (e) I. vasconicum, (AJC 1848), Cueva Ermita de Sandaili, rachidian teeth (r) flanked by 4-cuspid lateral teeth (l), C. ibazoricum-like in form; (f) Iberozospeum sp. (RMNH. MOL.234108), Cueva la Torcona, lateral teeth showing reduced mesocones (me) flanked by long, fang-like endo- and ectocones (e), rachidian tooth (r) (flipped over in upper righthand corner of image); (g) I. zaldivarae (AJC 1876a), Cueva de Las Paúles, transverse rows of teeth showing varying cusp lengths; (h) ibid., close up view (left to right) of marginal (m) and transitional teeth (t) on short, compact basal plates (bp). — Magnification varies for each perspective, see scale bars; all Figs taken by M. Ruppel, (ret.) Goethe University Frankfurt am Main
Рис. 1. Карта-схема пунктов сборов Gynaephora (rossii) в Якутии: 1 — о-в КотеΛьный; 2 — о-в СтоΛбовой; 3 — о-в МаΛый Αяховский; 4 — о-в БоΛьшой Αяховский; 5 — п-ов Быковский в устье Αены; 6 — СеΛΛяхская губа, р. СеΛях, низовья Яны; 7 — КоΛымская протока, низовья ИнΔигирки; 8 — озеро ХомоΛох, бассейн р. БёрёΛёх, низовья ИнΔигирки; 9 — о-в Крестовский; 10 — о-в ЧетырехстоΛбовой; 11 — устье р. Энюмчувеем, южное побережье Восточно-Сибирского моря; 12 — хребет СунтарХаята; 13 — р. ÀжеΛинΔа в системе Станового хребта (точками обозначены ранее опубΛикованные точки, треугоΛьниками — новые местообитания) Fig. 1. Chart of Gynaephora (rossii) collection sites in Yakutia: 1 — Kotelny island; 2 — Stolbovoy island; 3 — Maly Lyakhovsky island; 4 — Bolshoi Lyakhovsky island; 5 — Bykovsky peninsula at the mouth of the Lena river; 6 — Sellakhskaya bay, Selyakh river, lower reaches of the Yana river; 7 — Kolymskaya channel, lower reaches of the Indigirka river; 8 — Lake Homolokh, Berelekh river basin, lower reaches of the Indigirka river; 9 — Krestovsky island; 10 — Chetyrekhstolbovoy island; 11 — the mouth of the Enyumchuveem river, southern coast of the East Siberian sea; 12 — Suntar-Khayata ridge; 13 — Gelinda river in the Stanovoy ridge system (dots indicate previously published localities, triangles indicate new localities) in New data on the distribution of the Gynaephora (rossii) species group in Northern Yakutia
Рис. 1. Карта-схема пунктов сборов Gynaephora (rossii) в Якутии: 1 — о-в КотеΛьный; 2 — о-в СтоΛбовой; 3 — о-в МаΛый Αяховский; 4 — о-в БоΛьшой Αяховский; 5 — п-ов Быковский в устье Αены; 6 — СеΛΛяхская губа, р. СеΛях, низовья Яны; 7 — КоΛымская протока, низовья ИнΔигирки; 8 — озеро ХомоΛох, бассейн р. БёрёΛёх, низовья ИнΔигирки; 9 — о-в Крестовский; 10 — о-в ЧетырехстоΛбовой; 11 — устье р. Энюмчувеем, южное побережье Восточно-Сибирского моря; 12 — хребет СунтарХаята; 13 — р. ÀжеΛинΔа в системе Станового хребта (точками обозначены ранее опубΛикованные точки, треугоΛьниками — новые местообитания) Fig. 1. Chart of Gynaephora (rossii) collection sites in Yakutia: 1 — Kotelny island; 2 — Stolbovoy island; 3 — Maly Lyakhovsky island; 4 — Bolshoi Lyakhovsky island; 5 — Bykovsky peninsula at the mouth of the Lena river; 6 — Sellakhskaya bay, Selyakh river, lower reaches of the Yana river; 7 — Kolymskaya channel, lower reaches of the Indigirka river; 8 — Lake Homolokh, Berelekh river basin, lower reaches of the Indigirka river; 9 — Krestovsky island; 10 — Chetyrekhstolbovoy island; 11 — the mouth of the Enyumchuveem river, southern coast of the East Siberian sea; 12 — Suntar-Khayata ridge; 13 — Gelinda river in the Stanovoy ridge system (dots indicate previously published localities, triangles indicate new localities)
Рис. 1. Δинамика чисΛенности меΛких мΛекопитающих в Цасучейском бору: 1 — суммарная чисΛенность (особей / 100 циΛинΑро-суток); Αоминирующие виΑы: 2 — забайкаΛьский хомячок, 3 — бурозубка тунΑряная, 4 — бурозубка крошечная, 5 — поΛёвка монгоΛьская, 6 — поΛёвка РаΑΑе, 7 — красная поΛёвка; A — остепнённый сосняк, B — первичная гарь, С — старая гарь, D — повторная гарь; стреΛка указывает время прохожΑения пожара. Ось X — гг., ось Y — чисΛенность Fig. 1. Population dynamics of small mammals in the Tsasucheysky Pine Forest: 1 — total abundance (individuals / 100 cylinder-days); dominant species: 2 — Cricetulus pseudogriseus, 3 — Sorex tundrensis, 4 — S. minutissimus, 5 — Alexandromys mongolicus, 6 — Lasiopodomys raddei, 7 — Myodes rutilus; A — steppe pine forest, B — primary burns site, С — old burns site; D — repeated burns site; the arrow indicates the time of the fire. The X-axis shows years; the Y-axis shows population density in Population dynamics of small mammals after spring fires in steppe pine forest
Рис. 1. Δинамика чисΛенности меΛких мΛекопитающих в Цасучейском бору: 1 — суммарная чисΛенность (особей / 100 циΛинΑро-суток); Αоминирующие виΑы: 2 — забайкаΛьский хомячок, 3 — бурозубка тунΑряная, 4 — бурозубка крошечная, 5 — поΛёвка монгоΛьская, 6 — поΛёвка РаΑΑе, 7 — красная поΛёвка; A — остепнённый сосняк, B — первичная гарь, С — старая гарь, D — повторная гарь; стреΛка указывает время прохожΑения пожара. Ось X — гг., ось Y — чисΛенность Fig. 1. Population dynamics of small mammals in the Tsasucheysky Pine Forest: 1 — total abundance (individuals / 100 cylinder-days); dominant species: 2 — Cricetulus pseudogriseus, 3 — Sorex tundrensis, 4 — S. minutissimus, 5 — Alexandromys mongolicus, 6 — Lasiopodomys raddei, 7 — Myodes rutilus; A — steppe pine forest, B — primary burns site, С — old burns site; D — repeated burns site; the arrow indicates the time of the fire. The X-axis shows years; the Y-axis shows population density
Data for "Sounding out Ecoacoustic Metrics: Avian species richness is predicted by acoustic indices in temperate but not tropical habitats"
<p>This deposit contains the data for the paper <strong>A Multi-habitat, Comparative Evaluation of Ecoacoustic Indices for Biodiversity Monitoring: Acoustic Indices Predict Avian Species Richness in Temperate but not Tropical Habitats. (Ecological Indicators) </strong>The dataset contains a series of 1 min wav files recorded across UK and Ecuadorian habitats. Each one has 26 acoustic indices calculated on it, and a full list of avian species and abundances and GPS data for each sample site.</p> <p>Abstract</p> <p>Affordable, autonomous recording devices facilitate large scale acoustic monitoring and Rapid Acoustic Survey is emerging as a cost-effective approach to ecological monitoring; the success of the approach rests on the development of computational methods by which biodiversity metrics can be automatically derived from remotely collected audio data. Dozens of indices have been proposed to date, but systematic validation against classical, in situ diversity measures. This study conducted the most comprehensive comparative evaluation to date of the relationship between avian species diversity and a suite of acoustic indices across a wide range of ecological conditions. Acoustic surveys were carried out across habitat gradients in temperate and tropical biomes. Baseline avian species richness and subjective multi-taxa biophonic density estimates were established through aural counting by expert ornithologists. 26 acoustic indices were calculated and compared to observed variations in species diversity. Five acoustic diversity indices (Bioacoustic Index, Acoustic Diversity Index, Acoustic Evenness Index, Acoustic Entropy, and the Normalised Difference Sound Index) were assessed as well as three simple acoustic descriptors (root-mean-square, spectral centroid and zero-crossing rate). Highly significant correlations, of up to 65%, between acoustic indices and avian species richness were observed across temperate habitats, supporting the use of automated acoustic indices in biodiversity monitoring where a single vocal taxon dominates. Significant, weaker correlations were observed in neotropical habitats which host multiple non-avian vocalizing species. Multivariate classification analyses suggest that AIs also track observed differences in habitat-dependent community composition and that each habitat has a distinct soundscape. Multivariate analyses of the relative predictive power of AIs show that compound indices are more powerful predictors of avian species richness than any single index and simple descriptors contribute to predicting avian diversity in multi-taxa tropical environments. Our results support the use of community level acoustic indices as a proxy for species richness and point to the potential for tracking of habitat-dependent changes in community composition. Recommendations for the design of compound indices for multi-taxa community composition appraisal are put forward, with consideration for the requirements of next generation, low power remote monitoring networks.</p> <p> </p> <p><strong>Sampling Methods (extract from paper)</strong></p> <p>Acoustic surveys were carried out along a gradient of habitat degradation (1 forested, 2 regenerating forest and 3 agricultural land) in South East (SE) England and North Western (NW) Ecuador. The six sites (UK1, UK2, UK3, EC1, EC2, EC3) were sampled consecutively from May 6th - Aug 25th 2015.</p> <p>All UK sites were in the county of Sussex, in SE England, an area of weald clays (Fig. 2, left) and included ancient woodland (UK1), regenerating farmland with patches of woodland (UK2) and a downland barley farm (UK3).1 min mono audio recordings made every 15 minutes at three different habitats in the UK</p> <p>Ten day acoustic surveys were carried out consecutively at each study site using 15 Wildlife Acoustics Song Meter audio field recorders. Sampling points were arranged in a grid at a minimum distance of 200 m to minimise pseudo replication (the sound of most species being attenuated over this distance in all biomes). Altitudinal range of sample points across sites was minimised in order to prevent introduction of extraneous, confounding gradients (UK varied between 10 m – 50 m and Ecuador 130 m – 390 m). Recording schedules captured 1 min every 15 min around the clock for 10 days at each site, resulting in 960 recordings at each of 15 sample points for 3 habitat types in 2 different climates (86,400 1 minute recordings in total). Data across the 15 sample points was pooled; inter-site variation was not explored in the current analyses. In the UK 3½ hours of each dawn chorus was sampled starting at 1 hour before sunrise. This range was determined to capture the onset, progression and peak of the dawn chorus, creating a temporal gradient. The equatorial dawn chorus is more compact and was sampled for 2¼ hours starting 15 mins before sunrise, capturing a comparable chorus onset and peak.</p> <p> </p> <p> </p>
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group. in Distribution of extracellular enzyme-producing bacteria in the digestive tracts of 4 brackish water fish species
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group.
Text-fig. 3. Rhinoppioides quadrituberculatus MIKO gen. et sp. nov. Above: assumed fragments of legs as seen in body cavity of holotype (Aa – in dorsal view, Ab – in ventral view) and paratype (B, only dorsal view available). Below: speculative reconstruction of legs, assumed segments leg IV in above rows (numbers 1, 3, 5, 7, 12, 13, 14), assumed segments of leg I below (numbers 6, 9, 10). Rest of the segments assumed to belong to legs II and III. Only trochanters III (nr. 8) and IV (nr. 7, 12) undoubtedly belonging to the new species. Bars indicating 50 µm, numbers indicate identity of segments. in Oribatid Mite Fossils From Quaternary And Pre-Quaternary Sediments In Slovenian Caves I.Two New Genera And Two New Species Of The Family Oppiidae From The Early Pleistocene
Text-fig. 3. Rhinoppioides quadrituberculatus MIKO gen. et sp. nov. Above: assumed fragments of legs as seen in body cavity of holotype (Aa – in dorsal view, Ab – in ventral view) and paratype (B, only dorsal view available). Below: speculative reconstruction of legs, assumed segments leg IV in above rows (numbers 1, 3, 5, 7, 12, 13, 14), assumed segments of leg I below (numbers 6, 9, 10). Rest of the segments assumed to belong to legs II and III. Only trochanters III (nr. 8) and IV (nr. 7, 12) undoubtedly belonging to the new species. Bars indicating 50 µm, numbers indicate identity of segments.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.