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88 results for “invasive tree”

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dryad36/100

Slow soil enzyme recovery following invasive tree removal through gradual changes in bacterial and fungal communities

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publicAug 2023View details →
dryad36/100

Tree species richness suppresses red imported fire ant invasion in a subtropical plantation forest

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publicSep 2024View details →
dryad36/100

Data from: Role of multiple invasion mechanisms and their interaction in regulating the population dynamics of an exotic tree

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publicNov 2017View details →
dryad36/100

Plant invasion modifies isohydricity in Mediterranean tree species

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publicJun 2022View details →
dryad36/100

Data and MATLAB files for: Timescale analyses of fluctuations in coexisting populations of a native and invasive tree squirrel

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publicMar 2023View details →
dryad36/100

Remove saplings early: Cost effective strategies to contain tree invasions and prevent their impacts

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publicDec 2024View details →
zenodo32/100

FIGURE 13. Maximum Likelihood tree inferred using the Cox1 in The identity of the invasive yellow-striped terrestrial planarian found recently in Europe: Caenoplana variegata (Fletcher & Hamilton, 1888) or Caenoplana bicolor (Graff, 1899)?

FIGURE 13. Maximum Likelihood tree inferred using the Cox1 dataset. Values at nodes correspond to BP support values (left) and PP from the Bayesian analysis (right). Vertical bars at right correspond to the molecular species delimitation methods assignations (purple: ABGD; orange: bPTP).

opennotspecifiedFeb 2020View details →
zenodo32/100

The invasive pathogenic fungus of ash trees alters arthropod predator – prey food webs in forest plantations

<p>The data set contains data on:</p> <p>1] Prey type and size (sheet1: prey type and size). In the cells, prey length in mm is provided for each prey item. NA is stated for a prey item that could not be measured. In this sheet, the plot ids and the spider ids are also stated, which enables connection with other sheets. Note: more prey items caught by an individual are stated in one row if they are of different type. Prey items of a same type caught by an individual are itemized in more rows.</p> <p>2] Information about spider individuals (sheet2: spiders). For each spider individual, it is provided its id, so it can be connected with sheet 1, plot id where it was collected, when it was collected (month), web type, and prosoma length (mm).&nbsp;</p> <p>3] Characteristics of sampling plots (sheet3: environmental data). It is provided plot id, age, infestation degree by H<em>ymenoscyphus fraxineus</em>, canopy openness, shrub coverage, and herb coverage.</p> <p>4] Potential prey of spiders (sheet 4: potential prey). Standardized no. of prey per trap (20 x 15 cm, both sides were sticky) in each plot.</p>

opencc-by-4.0Aug 2020View details →
dryad32/100

Invasive earthworms reduce chemical defense and increase herbivory and pathogen infection in native trees

<ol> <li>Recent research shows that earthworms can alter defense traits of plants against herbivores and pathogens by affecting soil biochemistry. Yet, the effects of invasive earthworms on defense traits of native plants from previously earthworm-free ecosystems as well as the consequences for multitrophic interactions are virtually unknown.</li> <li>Here we use a combination of an observational study and a complementary experimental study to investigate the effects of invasive earthworms on leaf defense traits, herbivore damage, and pathogen infection in two poplar tree species (<i>Populus balsamifera </i>and <i>Populus tremuloides</i>) native to North American boreal forests.</li> <li>Our observational study showed that earthworm invasion was associated with enhanced leaf herbivory in saplings of both tree species. However, we only detected significant shifts in the concentration of chemical defense compounds in response to earthworm invasion for <i>P. balsamifera</i>. Specifically, leaf phenolic concentrations, including salicinoids and catechin, were lower in <i>P. balsamifera </i>from earthworm-invaded sites.</li> <li>Our experimental study confirmed an earthworm-induced reduction in leaf defense levels in <i>P. balsamifera</i> for one of the defense compounds, tremulacin. The experimental study additionally showed that invasive earthworms reduced leaf dry matter content, potentially increasing leaf palatability, and enhanced susceptibility of trees to infection by a fungal pathogen, but not to aphids, in the same tree species.</li> <li> <i>Synthesis. </i>Our results show that invasive earthworms can decrease the concentrations of some chemical defense compounds in <i>P. balsamifera</i>, which could make them susceptible to leaf-chewing insects. Such potential impacts of invasive earthworms are likely to have implications for tree survival and competition, native tree biodiversity, and ecosystem functioning.</li> </ol>

opencc-zeroSep 2020View details →
zenodo32/100

Supplementary material 1 from: Brundu G, Pauchard A, Pyšek P, Pergl J, Bindewald AM, Brunori A, Canavan S, Campagnaro T, Celesti-Grapow L, Dechoum M de S, Dufour-Dror J-M, Essl F, Flory SL, Genovesi P, Guarino F, Guangzhe L, Hulme PE, Jäger H, Kettle CJ, Krumm F, Langdon B, Lapin K, Lozano V, Le Roux JJ, Novoa A, Nuñez MA, Porté AJ, Silva JS, Schaffner U, Sitzia T, Tanner R, Tshidada N, Vítková M, Westergren M, Wilson JRU, Richardson DM (2020) Global guidelines for the sustainable use of non-native trees to prevent tree invasions and mitigate their negative impacts. NeoBiota 61: 65-116. https://doi.org/10.3897/neobiota.61.58380

Global guidelines for the sustainable use of non-native trees to prevent tree invasions and mitigate their negative impacts (GG-NNTs) Background information (Annex to the GG-NNTs)

opencc-zeroOct 2020View details →
dryad32/100

Genetic insights into the globally invasive and taxonomically problematic tree genus Prosopis

<p class="MsoCommentText"><span><span><span><span><span><span><span><span><span><span><span>Accurate taxonomic identification of alien species is crucial to detect new incursions, prevent or reduce the arrival of new invaders and implement management options such as biological control. Globally, the taxonomy of non-native <i>Prosopis </i>species<i> </i>is problematic due to misidentification and extensive hybridization. We performed a genetic analysis on several <i>Prosopis</i> species, and their putative hybrids, including both native and non-native populations, with a special focus on <i>Prosopis</i> invasions in Eastern Africa (Ethiopia, Kenya and Tanzania). We aimed to clarify the taxonomic placement of non-native populations and to infer the introduction histories of <i>Prosopis</i> in Eastern Africa. DNA sequencing data from nuclear and<b> </b>chloroplast markers showed high homology (almost 100%) between most species analysed. Analyses based on seven nuclear microsatellites confirmed weak population genetic structure among <i>Prosopis </i>species. Hybrids and polyploid individuals were recorded in both native and non-native populations. Invasive genotypes of <i>P. juliflora</i> in Kenya and Ethiopia could have a similar native Mexican origin, while Tanzanian genotypes likely are from a different source. Native Peruvian <i>Prosopis pallida</i> genotypes showed high similarity with non-invasive genotypes from Kenya. Levels of introduced genetic diversity, relative to native populations, suggest that multiple introductions of <i>P. juliflora</i> and <i>P. pallida</i> occurred to Eastern Africa. Polyploidy may explain the successful invasion of <i>P. juliflora </i>in Eastern Africa. The polyploid <i>Prosopis juliflora</i> was highly differentiated from the rest of the (diploid) species within the genus. The lack of genetic differentiation between most diploid species in their native ranges supports the notion that hybridization between allopatric species may occur frequently when they are co-introduced into non-native areas. For regulatory purposes, we propose to treat diploid <i>Prosopis</i> taxa from the Americas as a single taxonomic unit in non-native ranges.</span></span></span></span></span></span></span></span></span></span></span></p>

opencc-zeroDec 2020View details →
dryad32/100

Data from: Colonization history, host distribution, anthropogenic influence and landscape features shape populations of white pine blister rust, an invasive alien tree pathogen

White pine blister rust is caused by the fungal pathogen Cronartium ribicola J.C. Fisch (Basidiomycota, Pucciniales). This invasive alien pathogen was introduced into North America at the beginning of the 20th century on pine seedlings imported from Europe and has caused serious economic and ecological impacts. In this study, we applied a population and landscape genetics approach to understand the patterns of introduction and colonization as well as population structure and migration of C. ribicola. We characterized 1,292 samples of C. ribicola from 66 geographic locations in North America using single nucleotide polymorphisms (SNPs) and evaluated the effect of landscape features, host distribution, and colonization history on the structure of these pathogen populations. We identified eastern and western genetic populations in North America that are strongly differentiated. Genetic diversity is two to five times higher in eastern populations than in western ones, which can be explained by the repeated accidental introductions of the pathogen into northeastern North America compared with a single documented introduction into western North America. These distinct genetic populations are maintained by a barrier to gene flow that corresponds to a region where host connectivity is interrupted. Furthermore, additional cryptic spatial differentiation was identified in western populations. This differentiation corresponds to landscape features, such as mountain ranges, and also to host connectivity. We also detected genetic differentiation between the pathogen populations in natural stands and plantations, an indication that anthropogenic movement of this pathogen still takes place. These results highlight the importance of monitoring this invasive alien tree pathogen to prevent admixture of eastern and western populations where different pathogen races occur.

opencc-zeroDec 2014View details →
dryad32/100

Data from: Soil-mediated effects of invasive ungulates on native tree seedlings

1. Invasive browsing ungulates can have strong impacts on the structure and composition of forest ecosystems, particularly where ungulates are not native ecosystem components as in New Zealand. Ungulate impacts on plant communities have been considered mostly from an above-ground perspective. However, understanding below-ground effects of these invasive herbivores is critical as they may drive feedbacks to above-ground ecosystem components. 2. We measured growth responses of seedlings of five common tree species in a greenhouse experiment in soils collected from 26 plots fenced to exclude invasive ungulates for at least 17 years and from paired, unfenced-control plots. We then further investigated soil-mediated effects of ungulates on one tree species, Melicytus ramiflorus, by partitioning these effects into soil abiotic and biotic components, as well as measuring arbuscular mycorrhizal fungal (AMF) root infection. 3. Biomass of seedlings of all five species was greater in soils from within exclosures, although this was only significant for two species. These soil-mediated effects were partially driven by changes in soil physical and chemical properties; soil bulk densities were lower inside exclosures than in controls. 4. Effects of invasive ungulates on seedling biomass of M. ramiflorus were positively related to effects on percent AMF root infection. The biomass of M. ramiflorus seedlings was positively related to the AMF infection of its roots, which in turn was related to greater organic matter content and lower bulk density of soils from within exclosures. Results for M. ramiflorus indicated that soil-mediated effects of ungulates on seedling biomass were of abiotic origin, but were mediated by the biotic soil component, i.e., through effects on AMF. 5. Synthesis Invasive herbivores may potentially impact on plant performance and community structure not only directly but also indirectly through influencing soil abiotic and biotic properties. Our results show that shifts in plant–soil interactions and feedbacks represent important but understudied pathways by which invasive ungulates can have wide-ranging impacts on forest ecosystems. Future studies should consider the importance of soil-mediated effects of invasive ungulates relative to direct effects of herbivory.

opencc-zeroDec 2013View details →
dryad32/100

Data from: Frost maintains forests and grasslands as alternate states in a montane tropical forest-grassland mosaic; but alien tree invasion and warming can disrupt this balance

1. Forest-grassland mosaics, with abrupt boundaries between the two vegetation types, occur across the globe. Fire and herbivory are widely considered primary drivers that maintain these mosaics by limiting tree establishment in grasslands, while edaphic factors and frosts are generally considered to be secondary factors that reinforce these effects. However, the relative importance of these drivers likely varies across systems. In particular, although frost is known to occur in many montane tropical mosaics, experimental evidence for its role as a driving factor is limited. 2. We used replicated in-situ transplant and warming experiments to examine the role of microclimate (frost and freezing temperatures) and soil in influencing germination and seedling survival of both native forest trees and alien invasive Acacia trees in grasslands of a tropical montane forest-grassland mosaic in the Western Ghats of southern India. 3. Seed germination of both native and alien tree species was higher in grasslands regard-less of soil type, indicating that germination was not the limiting stage to tree establishment. However, irrespective of soil type, native seedlings in grasslands incurred high mortality fol-lowing winter frosts and freezing temperatures relative to native seedlings in adjoining forests where freezing temperatures did not occur. Seedling survival through the tropical winter was thus a primary limitation to native tree establishment in grasslands. In contrast, alien Acacia seedlings in grasslands incurred much lower levels of winter mortality. Experimental night-time warming in grasslands significantly enhanced over-winter survival of all tree seedlings, but increases in recruitment were much greater for alien Acacia than for native tree seedlings. 4. Synthesis: Our results provide evidence for a primary role for frost and freezing temperatures in limiting tree establishment in grasslands of this tropical forest-grassland mosaic. Future increases in temperature are likely to release trees from this limitation and favour tree expansion into grasslands, with rates of expansion of non-native Acacia likely to be much greater than that of native trees. We suggest that studies of frost limitation to plant establishment are needed across a range of tropical ecosystems to re-evaluate the general importance of frost as a driver of vegetation transitions in the tropics.

opencc-zeroJul 2019View details →
dryad32/100

Data from: Biogeographic variation of distance-dependent effects in an invasive tree species

1.Plant pathogens and herbivores can maintain forest diversity by reducing survival of tree seedlings close to conspecifics. However, how biogeographic variation in these natural enemies affects such distance‐dependent processes is unknown. Because invasive plants escape ecologically important enemies when introduced to a new range, distance‐dependent mortality may differ between their native and introduced ranges. 2. Here, we test whether the invasive tree Triadica sebifera escaped distance‐dependent mortality when introduced to the US from China, and examine the roles of natural enemies in native and introduced ranges. In both US and China, we performed field surveys along with field and greenhouse experiments with field collected soils and soil sterilization treatments. 3. In field surveys and the field experiment, insect damage on T. sebifera seedlings decreased with distance to conspecific trees in the native range (China) but damage was low at all distances in the introduced range (US). In the greenhouse experiment testing the effects of soil pathogens, T. sebifera seedling mortality decreased with soil distance from conspecific trees in both ranges but distance‐independent mortality was higher in native range soils. 4. Our findings indicate that both insect herbivores and the soil biota contribute to distance‐ dependent effects on T. sebifera in its native range. They suggest, however, that plants may more readily escape herbivore than soil biota distance‐dependent effects when introduced to a new range and so herbivores, rather than soil pathogens, contribute more strongly to biogeographic variation in distance‐dependent effects. These results highlight the importance of considering species biogeographic variation in distance‐dependent effects and teasing apart the roles that different natural enemies play when studying species coexistence, community diversity, and biological invasions.

opencc-zeroDec 2018View details →
dryad32/100

Data from: Density-dependent effects of a widespread invasive herbivore on tree survival and biomass during reforestation

Reforestation has been widely adopted as a solution to multiple global change issues. However, the role of herbivory by invasive species in the restoration of grassland to forest has received little attention. We conducted a field experiment to investigate the impacts of a widespread invasive mammalian herbivore, the European rabbit (Oryctolagus cuniculus), on trees planted in a landscape-scale reforestation program in south-eastern Australia. Three native tree species were planted inside and outside rabbit-proof exclosures within 10 experimental units, and a random half of the units were subjected to intensive and sustained rabbit control for the remainder of the experiment. Quarterly survival of trees, and total aboveground biomass at the conclusion of the experiment, were estimated using hierarchical Bayesian models. Control substantially reduced rabbit densities on the five treatment units relative to the five non-treatment units. Survival of trees planted outside exclosures was highest at lowest rabbit density and declined non-linearly with increasing rabbit density for all three tree species, but even very low rabbit densities had strong negative effects on the survival of trees outside exclosures. There was a three-way interaction between tree height, being outside an exclosure, and rabbit density. Smaller trees planted outside exclosures always had substantially lower overall survival than trees of the same height planted inside exclosures, and the magnitude of the difference increased with increasing rabbit density. Increasing rabbit densities reduced the overall survival of increasingly taller trees of all three species planted outside exclosures. The aboveground biomass of trees surviving outside exclosures was significantly greater in treatment units compared with non-treatment units for all three species. The combined effects of differential survival and accumulation of aboveground biomass led to higher biomasses inside exclosures relative to outside exclosures just 21 months after planting. The aboveground biomass of trees planted outside exclosures declined with increasing rabbit density, and was effectively zero when rabbit densities exceeded 100 active warren entrances/ha. These results demonstrate that invasive herbivores can rapidly arrest the conversion of grassland to forest. Invasive herbivores such as the European rabbit may need to be completely excluded in order to maximize the benefits of reforestation.

opencc-zeroDec 2014View details →
dryad32/100

The magnitude of large-scale tree mortality caused by the invasive pathogen Phytophthora ramorum

<p>Forest pathogens are important drivers of tree mortality across the globe but it is exceptionally challenging to gather and build unbiased quantitative models of their impacts, which has resulted in few estimates matching the scale of disease. Here we harness the rare dataset matching the spatial scale of pathogen invasion, host, and disease heterogeneity to estimate infection and mortality for the four most susceptible host species of <em>Phytophthora ramorum</em>, an invasive pathogen that drives the most important biological cause of tree mortality in a broad geographic region of coastal California and southwest Oregon. As of 2012, the most current field survey year, we estimate 17.5 (± 4.6 95% CI) million tanoak (<em>Notholithocarpus densiflorus)</em> stems were pathogen-killed with an additional 71 (± 21.5) million infected. We estimated 9.0 million (± 2.2) coast live oak (<em>Quercus agrifolia)</em> and 1.7 million (± 0.5) California black oak (<em>Quercus kelloggii</em>) stems are disease impacted (mortality and infection combined). Lastly, our estimates showed 95.23 million (± 8.6) million infected California bay laurel (<em>Umbellularia californica</em>), which does not suffer mortality from infection and represents a critical source of continued spread. Using an extensive dataset on mortality rates of infected individuals we estimate that cumulative mortality likely increased from 20.8 to 42.8 million individual stems between 2012 and 2019 for all species. While these impacts are substantial, the majority of host populations occur in a yet to be invaded region of northern California indicating that the disease will intensify in the coming decades.</p>

opencc-zeroFeb 2020View details →
dryad32/100

Data from: Inadvertent biological control: an Australian thrips killing an invasive New Zealand tree in California

Transport hubs of international trade and tourism are sites of unprecedented long-distance dispersal of species and novel ecological interactions. In cases of invasive plants released from their specialist natural enemies, novel interactions with both resident enemies and new arrivals can accumulate and potentially reduce weed competitiveness. I present here one dramatic example of this, where an invasive woody weed in southern California is being rapidly controlled by an accidentally introduced genus-specialist herbivorous insect. The New Zealand native shrub/small tree, Myoporum laetum, is a long-time popular ornamental plant in California and has become an invasive woody weed. In 2005, a Myoporum-specific thrips, Klambothrips myopori, was discovered (and described) in California feeding on M. laetum leaves. Several searches have failed to find K. myopori in New Zealand and a population has recently been discovered in Tasmania, Australia, feeding on Myoporum insulare. In 5 years, K. myopori has killed off about half of southern Californian M. laetum with almost all surviving individuals being gradually defoliated. Inadequate border biosecurity has resulted in inadvertent biological control, in a rapid timeframe, caused by a novel enemy. Unfortunately, K. myopori has subsequently been accidentally transported from California to Hawaii where it is now killing off Hawaiian native Myoporum sandwicense. Transport hubs can both connect weeds with natural enemies and disperse those enemies more widely.

opencc-zeroDec 2012View details →
dryad32/100

Data from: Fire and non-native grass invasion interact to suppress tree regeneration in temperate deciduous forests

1. While many ecosystems depend on fire to maintain biodiversity, non-native plant invasions can enhance fire intensity, suppressing native species and generating a fire–invasion feedback. These dynamics have been observed in arid and semi-arid ecosystems, but fire–invasion interactions in temperate deciduous forests, where prescribed fires are often used as management tools to enhance native diversity, have rarely been investigated. 2. Here we evaluated the effects of a widespread invasive grass on fire behaviour in eastern deciduous forests in the USA and the potential effects of fire and invasions on tree regeneration. We planted native trees into invaded and uninvaded forests, quantified fuel loads, then applied landscape-scale prescribed fires and no-burn controls, and measured fire behaviour and tree seedling and invasive plant performance. 3. Our results show that fires in invaded habitats were significantly more intense, including higher fire temperatures, longer duration and higher flame heights, even though invasions did not alter total fuel loads. The invasion plus fire treatment suppressed native tree seedling survival by 54% compared to invasions without fire, and invasions reduced natural tree recruitment by 66%. 4. We also show that invasive plant biomass did not change from one season to the next in plots where fire was applied, but invader biomass declined significantly in unburned reference plots, suggesting a positive invasive grass–fire feedback. 5. Synthesis and applications. These findings demonstrate that fire–invasion interactions can have significant consequences for invaded temperate forest ecosystems by increasing fire intensity and reducing tree establishment while promoting invasive plant persistence. To encourage tree regeneration and slow invasive spread, we recommend that forest managers remove invasions prior to applying prescribed fires or avoid the use of fire in habitats invaded by non-native grasses.

opencc-zeroDec 2014View details →
dryad32/100

Data from: Disentangling the drivers of invasion spread in a vector-borne tree disease

1. Pine wilt disease (PWD) invaded southern Japan in the early 1900's and has gradually expanded its range to northern Honshu (Japanese mainland). The disease is caused by a pathogenic North American nematode, which is transmitted by native pine sawyer beetles. Recently the disease has invaded other portions of East Asia and Europe where extensive mortality of host pines is anticipated to resemble historical patterns seen in Japan. 2. There is a critical need to identify the main drivers of PWD invasion spread so as to predict future spread and evaluate containment strategies in newly invaded world regions. But the coupling of pathogen and vector population dynamics introduces considerable complexity that is important for understanding this and other plant disease invasions. 3. In this study, we analysed historical (1980-2011) records of PWD infection and vector abundance, which were spatially extensive but recorded at coarse categorical levels (none, low and high) across 403 municipalities in northern Honshu. We employed a multistate occupancy model that accounted both for demographic stochasticity and observation errors in categorical data. 4. Analysis revealed that sparse sawyer populations had lower probabilities of transition to high abundance than did more abundant populations even when regional abundance stayed the same, suggesting the existence of positive density dependence, i.e. an Allee effect, in sawyer dynamics. Climatic conditions (average accumulated degree days) substantially limited invasion spread in northern regions, but this climatic influence on sawyer dynamics was generally weaker than the Allee effect. 5. Our results suggest that tactics (e.g., sanitation logging of infected pines) which strengthen Allee effects in sawyer dynamics may be effective strategies for slowing the spread of PWD.

opencc-zeroDec 2017View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record