Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,751
datasets available to search
ShareScore release 0.7.1
Dataset results
1,751 results for “molecular phylogenetics”
Figure 2 in Phylogenetic relationships of the bacchine Flower Flies (Diptera: Syrphidae) based on molecular characters, with a description of a new species of Melanostoma (Schiner, 1860)
Figure 2 Maximum-likelihood tree based on the combined dataset (COI, 28S, and 18S) using Garli v.2.1.17 and the structural alignment for 28S and 18S. Bootstrap support values (above) and Bayesian posterior probabilities (below) are depicted at the nodes (only>50 or>0.5, respectively). BS = Bootstrap support Downloaded from Brill.com 12/12/2023 03:06:37PM values; PP = Bayesian posteriorvia Open probabilities Access.. This is an open access article distributed under the terms of the CC-BY 4.0 License. https://creativecommons.org/licenses/by/4.0/
Figure 1 50 in Phylogenetic relationships of the bacchine Flower Flies (Diptera: Syrphidae) based on molecular characters, with a description of a new species of Melanostoma (Schiner, 1860)
Figure 1 50% majority rule consensus cladogram produced from Bayesian analysis of COI data. Bayesian posterior probabilities are shown at each node.
Figure 3 in Phylogenetic relationships of the bacchine Flower Flies (Diptera: Syrphidae) based on molecular characters, with a description of a new species of Melanostoma (Schiner, 1860)
Figure 3 Melanostoma janeceki Mengual, sp. nov. A, male holotype (ZFMK-DIP-00015940), lateral view; B, female paratype (ZFMK-DIP-00015958), lateral view; C, male holotype, habitus; D, female paratype (ZFMK-DIP-00015958), habitus; E, male holotype, frontal Downloadedview; F, fromfemale Brill.com paratype12/12 (/ ZFMK- 2023 03:06:37PM DIP-00015958), frontal view; G,via maleOpen holotype Access,. labels This; H is, an femaleopenparatype access (article ZFMK-DIP-distributed 00015958), underlabelsthe. terms of the CC-BY 4.0 License. https://creativecommons.org/licenses/by/4.0/
Fig. 6. Bayesian inference tree for 5519 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 6. Bayesian inference tree for 5519 bp alignment positions of nuclear 18S rRNA, 28S rRNA, mitochondrial cytochrome c oxidase subunit I, and 12S rRNA markers. Numbers on nodes indicate bootstrap values for maximum likelihood and Bayesian inference posterior probabilities.
Fig. 3. Poecilobdella nanjingensis Yang, 1996 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 3. Poecilobdella nanjingensis Yang, 1996, from Neidong, Wulai, KUZ Z1743. A, dorsal view of reproductive system including ventral nervous system; B, dorsal view of male median reproductive system with outline of prostate gland including positions of ganglia XI and XII; C, left lateral view of schematic drawing of male median reproductive system; D, dorsal view of female reproductive system with outline of prostate gland including position of ganglion XIII; E, lateral view of schematic drawing of female reproductive system. Scale bars: 2 mm (A); 0.5 mm (B, D). Abbreviations: at, atrium; eb, ejaculatory bulb; ep, epididymis; od, oviduct; ov, ovisac; pes, penis sheath; pg, prostate gland; ts, testisac; vd, vaginal duct; vg, vagina.
Fig. 4. Poecilobdella nanjingensis Yang, 1996 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 4. Poecilobdella nanjingensis Yang, 1996, from Neidong, Wulai, KUZ Z1743. A, dorsal view of live animal; B, live animal found under a stone at the locality. Scale bar: 5 mm (B).
Fig. 1. Poecilobdella nanjingensis Yang, 1996 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 1. Poecilobdella nanjingensis Yang, 1996, from Neidong, Wulai, KUZ Z1743. A, dorsal view; B, ventral view. Scale bar: 5 mm.
Fig. 2. Poecilobdella nanjingensis Yang, 1996 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 2. Poecilobdella nanjingensis Yang, 1996, from Neidong, Wulai, KUZ Z1743. A, dorsal view of somites I–XII; B, ventral view of somites I–VIII; C, dorsal view of somites XXIII–XXVII and caudal sucker; D, ventral view of somites XXIII and XXIV and caudal sucker; E, ventral view of somites XI and XII. Scale bars: 2 mm (A); 1 mm (B–E). Abbreviations: fg, female gonopore; mg, male gonopore; np, nephridiopore.
Fig. 5. Map showing the localities where Poecilobdella nanjingensis Yang, 1996 in First Record of Poecilobdella nanjingensis (Hirudinida: Arhynchobdellida: Hirudinidae) from Taiwan and its Molecular Phylogenetic Position within the Family
Fig. 5. Map showing the localities where Poecilobdella nanjingensis Yang, 1996 has been recorded. Closed circles indicate localities reported herein, open circles those from previous studies: aYang (1996) and bYang (2014).
Fig. 3. Phylogenetic trees obtained from a concatenated dataset with a in Molecular Systematics and Morphological Analyses of the Subgenus Setihenricia (Echinodermata: Asteroidea: Henricia) from Japan
Fig. 3. Phylogenetic trees obtained from a concatenated dataset with a total length of 1,277 bp, consisting of seven mitochondrial genes (16S, tRNA-Ala, tRNA-Leu, tRNA-Asn, tRNA-Gln, tRNA-Pro, and COI). The trees were built based on maximum likelihood (ML, left) and Bayesian inference (BI, right). Values at nodes indicate bootstrap scores from ML and posterior probabilities from BI. Outgroups are only shown in the ML tree with both the support values. Scale bars indicate the number of nucleotide substitutions per site. OTUs sequenced in this study are in bold face. Each letter in parentheses after non-bold OTUs denotes the source: C, Chichvarkhin (2017b); F, Foltz and Rocha- Olivares (unpublished); K, Knott et al. (2018); L, Lopes et al. (2016); M, Matsubara et al. (2004); W, Wada et al. (1996). Circles indicate species listed as Setihenricia in Chichvarkhin and Chichvarkhina (2017). Triangles indicate species morphologically identified as Setihenricia in this study (see Fig. 4A).
Fig. 4 in Redescription And New Host Record Of Diplostamenides Sciaenae (Monogenea, Microcotylidae) And Its Phylogenetic Status Using Molecular Markers
Fig. 4. Phylogenetic tree topology of partial 18S rRNA nucleotide sequence data for different microcotylids and outgroup as diclidophorids through NJ and ME methods. The bootstrap values for 1000 replicates are shown as in the phylogram and branch length is genetic distance between taxa.
Fig. 3 in Redescription And New Host Record Of Diplostamenides Sciaenae (Monogenea, Microcotylidae) And Its Phylogenetic Status Using Molecular Markers
Fig. 3. Phylogenetic tree topology of parital 28S rRNA nucleotide sequence data for the members of microcotytlidae and outgroup of members of diclidophoridae through NJ and ME methods. The bootstrap values for 1000 replicates are shown as in the phylogram and branch length is genetic distance between taxa.
Fig. 1 in Redescription And New Host Record Of Diplostamenides Sciaenae (Monogenea, Microcotylidae) And Its Phylogenetic Status Using Molecular Markers
Fig. 1. Diplostamenides sciaenae: A — whole mount (ventral view): OS, oral sucker; P, pharyn×; OE, oesophagus; GA, genital atrium; IC, intestinal caecum; VI, vitellarium; H, haptor; C, clamp B — reproductive system: V, vas deferens; VD, vitelline duct; O, ovary; CVD, common vitelline duct; GIC, genitointestinal canal; OD, oviduct; OT, ootype; T, testes C — genital atrium and spines: AS, atrial spines; D — clamp and associated sclerites: SMD, scleritum marginal dorsale; SMV, scleritum marginal ventrale; SM, Scleritum median; SOB, scleritum obliqum basale; ETD, extreme terminal dorsale; ETV, extreme terminal ventrale.
Fig. 2 in Redescription And New Host Record Of Diplostamenides Sciaenae (Monogenea, Microcotylidae) And Its Phylogenetic Status Using Molecular Markers
Fig. 2. Diplostamenides sciaenae digital phototmicrographs (present study): A — whole mount; B — clamp and associated sclerites; C — gential atrium and spines; D — anterior region with oral suckers, pharyn× and oesophagus. Abbreviations are provided in figure 1.
Fig. 30 in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 30. Male anterior thoracic sternum and pleon of Pseudosesarma. A, P edwardsii, lectotype male (17.5 × 16.1 mm) (RMNH-D17a), Mergui Archipelago; B, P. edwardsii, male (13.4 × 11.9 mm) (ZRC 1965.8.2.81), Pulau Pawai, Singapore; C, P. crassimanum, male (15.9 × 14.5 mm) (RMNH-D23313), Singapore; D, P. glabrum, holotype male (13.8 × 12.0 mm) (CUSAT 2016-1), Kerala, India; E, P. anteactum, holotype male (16.7 × 14.7 mm) (ZRC 2016.0602), Sri Lanka; F, P. anteactum, paratype male (21.2 × 19.7 mm) (ZRC 2016.0603), Sri Lanka; G, P. brehieri, holotype male (17.4 × 15.7 mm) (ZRC 2016.0593), Myanmar; H, P. boulengeri, lectotype male (26.9 × 23.5 mm) (NHM 1919.11.14.1), Basra, Iraq.
Fig. 27 in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 27. Outer view of chela of Pseudosesarma. A, P. edwardsii, lectotype male (17.5 × 16.1 mm) (RMNH-D17a), Mergui Archipelago; B, P. edwardsii, male (13.4 × 11.9 mm) (ZRC 1965.8.2.81), Pulau Pawai, Singapore; C, P. edwardsii, male (19.4 × 17.3 mm) (ZRC 1971.9.24.8), Singapore; D, P. crassimanum, male (15.9 × 14.5 mm) (RMNH-D23313), Singapore; E, P. anteactum, holotype male (16.7 × 14.7 mm) (ZRC 2016.0602), Sri Lanka; F, P. glabrum, holotype male (13.8 × 12.0 mm) (CUSAT 2016-1), Kerala, India; G, P. brehieri, holotype male (17.4 × 15.7 mm) (ZRC 2016.0593), Myanmar; H, P. boulengeri, lectotype male (26.9 × 23.5 mm) (NHM 1919.11.14.1), Basra, Iraq.
Fig. 37. A–G in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 37. A–G, Pseudosesarma brehieri, paratype female (14.9 × 13.4 mm) (ZRC 2016.0594), Myanmar; F, G, P. brehieri, male (15.0 × 13.6 mm) (ZRC 2013.0209), West Bengal, India; H, I, P. brehieri, male (14.5 × 13.0 mm) (ZRC 2013.0209), West Bengal, India; J–O, P. boulengeri, lectotype male (26.9 × 23.5 mm) (NHM 1919.11.14.1), Basra, Iraq. A, K, male pleon; B, F, L, left G1 (ventral view, denuded); D, G, M, left G1 (dorsal view, denuded); E, left G2; H, O, left distal part of G1 (dorsal view, denuded); I, N, left distal part of G1 (ventral view, denuded); J, anterior thoracic sternites 1–4. Scales: A = 4.0 mm; B–E, N, O = 1.0 mm; F–I = 0.5 mm; J, K = 5.0 mm; L, M = 2.0 mm. A–E, after Ng (2018: fig. 7E–I).
Fig. 25 in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 25. Frontal view of cephalothorax of Pseudosesarma. A, P. edwardsii, lectotype male (17.5 × 16.1 mm) (RMNH-D17a), Mergui Archipelago; B, P. edwardsii, male (13.4 × 11.9 mm) (ZRC 1965.8.2.81), Pulau Pawai, Singapore; C, P. crassimanum, male (15.9 × 14.5 mm) (RMNH-D23313), Singapore; D, P. anteactum, holotype male (16.7 × 14.7 mm) (ZRC 2016.0602), Sri Lanka; E, P. glabrum, holotype male (13.8 × 12.0 mm) (CUSAT 2016-1), Kerala, India; F, P. brehieri, holotype male (17.4 × 15.7 mm) (ZRC 2016.0593), Myanmar; G, P. boulengeri, lectotype male (26.9 × 23.5 mm) (NHM 1919.11.14.1), Basra, Iraq; H, Contusarma bocourti, male (25.3 × 23.3 mm) (ZRC 2000.0952), Bangkok, Thailand; I, Contusarma cheirogonum, neotype male (24.5 × 21.5 mm) (ZRC 1995.225), Bako National Park, Sarawak; J, Miersarma granosimanum, lectotype male (16.9 × 14.8 mm) (NHM 1880.6), Borneo.
Fig. 22. Overall habitus, Pseudosesarma species. A, P in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 22. Overall habitus, Pseudosesarma species. A, P. edwardsii, lectotype male (17.5 × 16.1 mm) (RMNH-D17a), Mergui Archipelago; B, P. edwardsii, male (13.4 × 11.9 mm) (ZRC 1965.8.2.81), Pulau Pawai, Singapore; C, P. edwardsii, male (12.9 × 11.8 mm) (ZRC 1971.9.24.9), Singapore; D, P. crassimanum, male (15.9 × 14.5 mm) (RMNH-D23313), Singapore; E, P. anteactum, holotype male (16.7 × 14.7 mm) (ZRC 2016.0602), Sri Lanka; F, P. glabrum, holotype male (13.8 × 12.0 mm) (CUSAT 2016-1), Kerala, India; G, P. brehieri, holotype male (17.4 × 15.7 mm) (ZRC 2016.0593), Myanmar; H, P. boulengeri, lectotype male (26.9 × 23.5 mm) (NHM 1919.11.14.1), Basra, Iraq.
Fig. 36. A–G in Revision of the intertidal and semiterrestrial crab genera Chiromantes Gistel, 1848, and Pseudosesarma Serène & Soh, 1970 (Crustacea: Brachyura: Sesarmidae), using morphology and molecular phylogenetics, with the establishment of nine new genera and two new species
Fig. 36. A–G, Pseudosesarma anteactum, holotype male (16.7 × 14.7 mm) (ZRC 2016.0602), Sri Lanka; H–L, P. glabrum, holotype male (13.8 × 12.0 mm) (CUSAT 2016-1), Kerala, India. A, I, left G1 (ventral view); B, J, left G1 (dorsal view); C, D, distal part of left G1 (ventral view, slightly different angles); E, K, ventro-mesial view of distal part of left G1; F, distal part of left G1 (dorsal view); G, L, left G2; H, pleon. Scales: A, B, G = 1.0 mm; C–F, I–L = 0.5 mm; H = 2.0 mm. A–G, after Ng & Schubart (2017: fig. 17); H–L, after Ng et al. (2017a: fig. 4).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.