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55
datasets available to search
ShareScore release 0.9.0
Dataset results
55 results for “phytochrome”
ChIP-Seq analysis of Phytochrome Interacting Factor 5 DNA binding in low R/FR condition
GEO Series GSE35059. Arabidopsis thaliana. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Arabidopsis phytochrome A directly targets numerous promoters for individualized modulation of genes in wide range of pathways
GEO Series GSE48770. Arabidopsis thaliana. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Phytochrome B-SPA-COP1 regulation of red light induced gene expressions in Arabidopsis thaliana
GEO Series GSE117114. Arabidopsis thaliana. 21 samples. Type: Expression profiling by high throughput sequencing.
A shade-induced long non-coding RNA promotes shade response through repressing the transcriptional induction of PHYTOCHROME A
GEO Series GSE210807. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways
GEO Series GSE79049. Triticum turgidum subsp. durum. 32 samples. Type: Expression profiling by high throughput sequencing.
Arabidopsis De-etiolated 1 Represses Photomorphogenesis by Positively Regulating Phytochrome Interacting Factors in the Dark
GEO Series GSE60835. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.
Mechanism of early light signaling by the carboxy-terminal output module of Arabidopsis phytochrome B
GEO Series GSE90925. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
Expression data of Arabidopsis thaliana (Ler accession) phytochrome phyABCDE quintuple mutant and phyABDE quadruple mutant in response to red light, and their comparison to WT expression data
GEO Series GSE31587. Arabidopsis thaliana. 22 samples. Type: Expression profiling by array.
Genome-wide identification of genes involved in phytochrome (phy)-mediated anther development in rice
GEO Series GSE84077. Oryza sativa. 12 samples. Type: Expression profiling by high throughput sequencing.
Two bHLH Transcription Factors, bHLH48 and bHLH60, Associate with PHYTOCHROME INTERACTING FACTOR 7 to Regulate Hypocotyl Elongation in Arabidopsis thaliana
GEO Series GSE156584. Arabidopsis thaliana. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
PHYTOCHROME-INTERACTING FACTOR 7 and RELATIVE OF EARLY FLOWERING 6 act in shade avoidance memory in Arabidopsis
GEO Series GSE268785. Arabidopsis thaliana. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A light-independent allele of phytochrome B faithfully recapitulates photomorphogenic transcriptional networks
GEO Series GSE8951. Arabidopsis thaliana. 15 samples. Type: Expression profiling by array.
Phytochrome Interacting Factors 4 and 5 redundantly limit seedling de-etiolation in continuous far-red light.
GEO Series GSE16333. Arabidopsis thaliana. 18 samples. Type: Expression profiling by array.
SUPPRESSOR OF PHYTOCHROME B4#3 reduces the expression of PIF-activated genes and increases expression of growth repressors to regulate hypocotyl elongation in short days [ChIP-seq]
GEO Series GSE189262. Arabidopsis thaliana. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SUPPRESSOR OF PHYTOCHROME B4#3 reduces the expression of PIF-activated genes and increases expression of growth repressors to regulate hypocotyl elongation in short days
GEO Series GSE189265. Arabidopsis thaliana. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Phytochrome Interacting Factor 4 and 5 regulate different set of genes in high and low red/far-red light
GEO Series GSE35057. Arabidopsis thaliana. 24 samples. Type: Expression profiling by array.
Transcriptomes of transgenic rice expressing a constitutively active phytochrome OsPHYB-Y283H (OsYHB) allele
GEO Series GSE36320. Oryza sativa Japonica Group; Oryza sativa. 8 samples. Type: Expression profiling by array.
Phytochrome Interacting Factors 4 and 5
GEO Series GSE35062. Arabidopsis thaliana. 26 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
Light- and Phytochrome-Dependent Regulation of Hypocotyl Elongation in Arabidopsis thaliana
GEO Series GSE38989. Arabidopsis thaliana. 9 samples. Type: Expression profiling by array.
Diatom phytochromes reveal the existence of far-red light based sensing in the ocean
GEO Series GSE73915. Phaeodactylum tricornutum. 6 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.