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Dataset results

145 results for “single-cell RNAseq”

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dryad28/100

A single-cell RNAseq atlas of Schistosoma mansoni identifies a key regulator of blood feeding

Open the record for dataset details and reuse information.

publicAug 2020View details →
geo24/100

Single-cell RNAseq analysis of peripheral blood and tumor infiltration immune cells in glioblastoma

GEO Series GSE247824. Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

Single-cell RNAseq analysis (10X Genomics Chromium) of cMAF- and Mafb-deficent lung monocytes and interstium macrophages

GEO Series GSE193891. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo24/100

Deep single-cell RNAseq of Gpnmb+Clec7a+ microglia from postnatal day 7 cerebellum

GEO Series GSE123024. Mus musculus. 143 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2018View details →
geo24/100

Targeted single-cell RNAseq of tonsil organoid cultures

GEO Series GSE158459. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

10X single-cell RNASeq profiling of control or Ptpn2-null P14 CD8+ T-cells from mice chronically infected with LCMV Clone 13

GEO Series GSE134139. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2019View details →
geo24/100

Single-cell RNAseq of the murine intestinal epithelium infected with rotavirus

GEO Series GSE169197. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2021View details →
geo24/100

Single-cell RNAseq data from mouse ON direction-selective ganglion cells

GEO Series GSE211344. Mus musculus. 719 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Single-cell RNAseq of mouse ear dermal endothelial cells

GEO Series GSE202290. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

Single-cell RNAseq analysis of bone marrow stromal cells of old bones [Prrx1cre_18M_RNA]

GEO Series GSE185786. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2021View details →
geo24/100

Time-resolved single-cell RNAseq profiling identifies a novel Fabp5-expressing subpopulation of inflammatory myeloid cells in chronic spinal cord injury

GEO Series GSE159638. Mus musculus. 25 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo24/100

Single-cell RNASeq analysis of human retinal organoids generated from hiPSC derived of a healthy donor patient

GEO Series GSE174215. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

Single-cell RNAseq libraries derived from brainstem tissue containing the pre-Bötzinger complex

GEO Series GSE192680. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2022View details →
geo24/100

Single-cell RNAseq of murine Peyer's patches after one dose of anti-α4β7 antibody or PBS

GEO Series GSE251745. Mus musculus. 4 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenJun 2024View details →
geo24/100

Single-cell RNAseq of the resident immune cells from Gli1HhipCKO_Tam and Gli1HhipCKO_Oil_Control mice lungs

GEO Series GSE206721. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2023View details →
geo24/100

10X Genomics single-cell RNAseq combined with CRISPR tiling of Dot1l in mouse MLL-AF9 leukemia

GEO Series GSE174307. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2021View details →
geo24/100

Single-cell RNAseq uncovers cellular heterogeneity and provides a signature for pediatric sleep apnea 

GEO Series GSE214865. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2023View details →
geo24/100

Single-cell RNAseq characterization of anatomically-identified OLM interneurons in different transgenic mouse lines

GEO Series GSE124847. Mus musculus. 46 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo24/100

Single-cell RNAseq analysis of kidney glomerular injury in IgA nephropathy

GEO Series GSE166793. Mus musculus. 3143 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo24/100

Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNAseq

GEO Series GSE82187. Mus musculus. 1208 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2016View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record