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45 results for “timelapse”
Centripetal migration in Drosophila ovary II: wild type timelapse & milestone duration
<p>Part of data supporting Figs 1,3,S2 of “Two phases for centripetal migration of Drosophila melanogaster follicle cells: initial ingression followed by epithelial migration”</p> <p>DOI: 10.1242/dev.200492</p> <p><strong>Data files descriptions:</strong></p> <ul> <li><strong>“10.25.17 – ShgGFP 40x-timelapse” 6.4 GB</strong></li> </ul> <p> shg-GFP marker timelapse image data used for milestone duration </p> <ul> <li><strong>“fixed samples with DAPI” 473.5 MB</strong></li> </ul> <p> Fixed sample image data</p> <ul> <li><strong>“Full Cell Behaviors & Timing Analysis” 10 KB</strong></li> </ul> <p> Quantitation of intervals between landmarks and total time elapsed</p> <ul> <li><strong>“Landmarks pre-analysis” 8 KB</strong></li> </ul> <p> Candidate morphological landmarks and ordering</p> <ul> <li><strong>“GR1-tdEOS analysis” 3 KB</strong></li> </ul> <p> Evaluation of samples from Vkg-GFP GR! tdEOS data</p> <ul> <li><strong>“Vkg-GFP GR1-tdEOS timelapse” 11.43 GB</strong></li> </ul> <p> timelapse image data</p> <ul> <li><strong>“Vkg-GFP GR1-Tomato timelapse” 12.9 GB</strong></li> </ul> <p> timelapse image data</p>
Cell tracking data from: Automated timelapse data segmentation reveals in vivo cell state dynamics
<p>Embryonic development proceeds as a series of orderly cell state transitions built upon noisy molecular processes. Here, we defined gene expression and cell motion states using single cell RNA sequencing data and in vivo timelapse cell tracking data of the zebrafish tailbud. We performed a parallel identification of these states using dimensional reduction methods and a change point detection algorithm. Both types of cell states were quantitatively mapped onto embryos, and we utilized the cell motion states to study the dynamics of biological state transitions over time. The time average pattern of cell motion states is reproducible among embryos. However, individual embryos exhibit transient deviations from the time average forming left-right asymmetries in collective cell motion. Thus, the reproducible pattern of cell states and bilateral symmetry arises from temporal averaging. In addition, collective cell behavior can be a source of asymmetry rather than a buffer against noisy individual cell behavior.</p>
Timelapse of Outdoor Pre-experiment of Monitoring Framework
<p>The presented timelapse is part of an ongoing EU-funded project called Eco-Metabolistic Architecture at the Royal Danish Academy - CITA in Copenhagen, Denmark. The timelapse is a pre-experiment of the Outdoor Monitoring Framework developed for investigating the behaviour of bio-based materials to weathering. </p>
Timelapse of Indoor Monitoring of 3D printed Panels installed in Living Prototypes Exhibition in Aedes Forum, Berlin
<p>The presented timelapse is part of an ongoing EU-funded project called Eco-Metabolistic Architecture at the Royal Danish Academy - CITA in Copenhagen, Denmark. The timelapse is part of Indoor Monitoring Framework developed for Living Prototype Exhibition at Aedes Forum in Berlin. </p>
Barra do Rio coastal lagoon timelapse (2001-2020)
<p><strong>Abstract</strong></p> <p>Timelapse of the geographic clipping of Barra do Rio coastal lagoon, located on the east coast of the Rio Grande do Norte state (Lat: 5°40′33.5"S / Long: 35°3′5"W). The timelapse aims to demonstrate the intense environmental dynamics of coastal lagoon (connections with the sea).</p> <p><strong>Methods</strong></p> <p>This timelapse was built based on 32 high resolution satellite images (2s frame duration), present in the Google Earth Pro Software database, between 2001 and 2020. Builder software: Movie Maker - Video Editor FREE.</p>
Cell tracking data from: Automated timelapse data segmentation reveals in vivo cell state dynamics
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In vivo timelapse imaging and analysis of Golgi satellite organelle distribution and movement in the neural progenitor cells of the brain
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Cardiomyocyte timelapse videos
<p>Supplementary videos for PhD Thesis " Remote Refocusing light-sheet fluorescence microscopy for high-speed 2D and 3D imaging of calcium dynamics in cardiomyocytes" at Imperial College London. <br> The videos included are the following: <br> 1. Video 4.3: 2D LSFM timelapse of calcium transients and sparks in a cardiomyocyte.<br> 2. Video 5.5: 3D LSFM timelapse of hiPSC-CM undergoing spontaneous calcium transients.<br> 3. Video 5.6: Widefield transillumination timelapse of hiPSC-CM and adult-CM co-culture.<br> 4. Video 5.7: Widefield epifluorescence timelapse of hiPSC-CM and adult-CM co-culture<br> 5. Video 5.8: 3D LSFM timelapse of synchronized transients in hiPSC-CM and adult-CM co-culture.<br> 6. Video 5.10a: 3D LSFM timelapse of hiPSC-CM and adult-CM co-culture, without NBleb.<br> 7. Video 5.10b: 3D LSFM timelapse of hiPSC-CM and adult-CM co-culture, with NBleb.<br> 8. Video 5.11: 3D LSFM timelapse of live myocardial slices undergoing stimulated contraction.</p>
Timelapse of eGaIn Propagating Through Aluminum 2
<p>Animation of the timelapse presented in Fig. 4-12. Timelapse begins immediately after the end of the video in Fig. S-1. The area imaged is adjacent and just to the right of the region observed in Fig. S-1. Each frame is equal to one minute of elapsed time. Total time of the video is 88 minutes.</p>
Timelapse of eGaIn Penetrating Coarse Grained Zinc
<p>Scanning electron microscope timelapse of liquid eutectic gallium indium penetrating the grain boundaries of a coarse grained zinc specimen. The dark gray phase is the solid zinc and the brightest white phase is solid indium precipitates that form as indium is displaced from the liquid phase by zinc. The intermediate gray is the liquid phase widening in the grain boundaries in the wake of the penetration front. The rate of the front was determined by tracking the first appearance of indium precipitates which was the first indication of eGaIn presence in boundaries at this scale. Liquid metal induced recrystallization is apparent in the wake of the front on the left edge of the frame. </p>
Timelapse of eGaIn Penetrating Fine Grained Zinc
<p>Scanning electron microscope timelapse of liquid eutectic gallium indium penetrating the grain boundaries of a fine grained zinc specimen. The dark gray phase is the solid zinc and the brightest white phase is solid indium precipitates that form as indium is displaced from the liquid phase by zinc. The intermediate gray is the liquid phase widening in the grain boundaries in the wake of the penetration front. The rate of the front was determined by tracking the first appearance of indium precipitates which was the first indication of eGaIn presence in boundaries at this scale. </p>
Timelapse of eGaIn Propagating Through Polished Aluminum
<p>Gallium-indium eutectic liquid metal alloy propagating through the grain boundaries of a polished piece of Al5052 sheet adhered to a glass slide. First frame taken 30 minutes after initial exposure. One frame of the video represents one minute of elapsed time. Total time of the video is 107 minutes.</p>
Timelapse video of development of Lymnaea stagnalis
<p>A time-lapse video showcasing the entire development of a <em>Lymnaea stagnalis</em> embryo.</p>
Drosophila wing disc cell morphology in timelapse
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TimeLapse-seq reveals that ALKBH5 modulates RNA stability of metabolic transcripts
GEO Series GSE194148. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Iterative transcription factor screening enables rapid generation of microglia-like cells from human iPSC - Timelapse sequencing data of Transcription Factor induced Microglia Like cells
GEO Series GSE287851. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
TimeLapse-seq after translation inhibition in Mettl14 knockout mESC
GEO Series GSE297221. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
TimeLapse-seq after amino acid starvation in Mettl3 knockout MEF
GEO Series GSE249256. Mus musculus. 12 samples. Type: Other.
Embryo Assessment Utilizing Timelapse Imaging in Conjunction With Preimplantation Genetic Testing for Aneuploidy With Next Generation Sequencing
ClinicalTrials.gov study NCT06419127. IPD Sharing: NO. Countries: 1. Publications: 0.
TimeLapse-seq after translation inhibition in YTHDF-depleted Hela cells
GEO Series GSE297222. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.