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137
datasets available to search
ShareScore release 0.9.0
Dataset results
137 results for “transcription start site”
Transcription start site analysis for Thermotoga maritima [RNA-seq]
GEO Series GSE37461. Thermotoga maritima MSB8. 2 samples. Type: Expression profiling by high throughput sequencing.
In vitro transcription start sites (TSSs) determined by 5'-RACE
GEO Series GSE93669. Saccharomyces cerevisiae. 4 samples. Type: Other.
TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens.
GEO Series GSE85110. Acinetobacter baumannii; Staphylococcus aureus; Staphylococcus epidermidis; Klebsiella aerogenes. 30 samples. Type: Expression profiling by high throughput sequencing; Other.
Ribosome rescue factor PELOTA modulates translation start site choice and protein isoform levels of transcription factor C/EBPα [CRISPRi]
GEO Series GSE226435. Homo sapiens. 16 samples. Type: Other.
Characterization of the ZFX family of transcription factors that bind downstream of the start site of CpG island promoters
GEO Series GSE145160. Homo sapiens. 58 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Comparison of alternative decapping enzymes to map transcription start sites genome-wide
GEO Series GSE73819. Saccharomyces cerevisiae. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcription start site analysis of NIPBL depletion in cancer cell line
GEO Series GSE263449. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Transcripts from downstream alternative transcription start sites evade uORF-mediated inhibition of gene expression during blue light exposure in Arabidopsis
GEO Series GSE109122. Arabidopsis thaliana. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Jmjd2a and Jmjd2c regulate H3K9me3 and H3K36me3 at H3K4me3 positive transcription start sites being essential for ESC self-renewal and embryogenesis (ChIP-Seq)
GEO Series GSE64252. Mus musculus. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The MMP-2 histone H3 N-terminal tail protease is selectively targeted to the transcription start sites of active genes [RNA-seq]
GEO Series GSE224885. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing.
Quality control of transcription start site selection by Nonsense-Mediated-mRNA Decay
GEO Series GSE64139. Saccharomyces cerevisiae BY4741. 40 samples. Type: Expression profiling by high throughput sequencing.
The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site selection in Arabidopsis [MNase-seq]
GEO Series GSE205110. Arabidopsis thaliana. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE
GEO Series GSE36213. Drosophila melanogaster; Homo sapiens. 37 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive determination of transcription start sites derived from all RNA polymerases using ReCappable-seq
GEO Series GSE132660. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Acetyl-methyllysine marks chromatin at active transcription start sites
GEO Series GSE182204. Drosophila melanogaster; Homo sapiens. 68 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Identifying transcription start sites and active enhancer elements using BruUV-seq
GEO Series GSE75398. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
DNA methylation controls unmethylated transcription start sites in the genome in trans
GEO Series GSE85312. Homo sapiens. 24 samples. Type: Methylation profiling by genome tiling array.
Nascent elongating transcript sequencing (NET-seq) for Escherichia coli and Bacillus subtilis reveals a consensus pause sequence enriched at translation start sites.
GEO Series GSE56720. Bacillus subtilis; Escherichia coli. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Genome-wide maps of primary and processed start-sites of transcripts revealed mechanism controlling in vivo stoichiometry of protein complex in bacteria
GEO Series GSE57652. Ruminiclostridium cellulolyticum. 12 samples. Type: Expression profiling by high throughput sequencing.
G2/M DNA synthesis at transcription start sites because of RNA transcription persistence during DNA replication [BrdU-Seq]
GEO Series GSE136288. Homo sapiens. 24 samples. Type: Other.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.