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441
datasets available to search
ShareScore release 0.9.0
Dataset results
441 results for “transcriptome comparison”
Expression and comparison of unigene in the transcriptome in Siniperca chuatsi
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The Arabidopsis spaceflight transcriptome: a comparison of whole plants to discrete root hypocotyl and shoot responses to the orbital environment
Arabidopsis thaliana was evaluated for its response to the spaceflight environment in three replicated experiments on the International Space Station. Two approaches were used; GFP reporter genes were used to collect gene expression data in real time within unique GFP imaging hardware and plants were harvested on orbit to RNAlater for subsequent analyses of gene expression with using Affymetrix and SAGE transcriptome analyses. Three tissue types were examined (leaves hypocotyls and roots) and compared to analyses conducted with whole plants. Transcriptome analyses with whole plants suggested that the spaceflight environment had little impact on the transcriptome of arabidopsis however closer examination of selected tissues revealed that there are a number of tissue-specific responses that arabidopsis employs to respond to this novel environment
A human transcriptome array for high-throughput clinical studies (with a comparison to RNA-seq technology) [RNA-Seq]
GEO Series GSE26109. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Differential transcriptomics in sarcoidosis lung and lymph node granulomas with comparisons to pathogen-specific granulomas
GEO Series GSE157671. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing.
Comparison of transcriptome between E .faecalis OG1RF and rnjB deletion mutant
GEO Series GSE95005. Enterococcus faecalis. 6 samples. Type: Expression profiling by array.
Cross-Species Comparisons of Transcriptomic Alterations in Human and Rat Primary Hepatocytes Exposed to 2,3,7,8-Tetrachlorodibenzo-p-dioxin: human samples
GEO Series GSE34249. Homo sapiens. 60 samples. Type: Expression profiling by array.
Transcriptomic comparison of long- vs. short-lived C. elegans
GEO Series GSE283419. Caenorhabditis elegans. 34 samples. Type: Expression profiling by high throughput sequencing.
Comparison of imaging based single-cell resolution spatial transcriptomics profiling platforms using formalin-fixed paraffin-embedded tumor samples [CosMx]
GEO Series GSE299786. Homo sapiens. 4 samples. Type: Other.
Comparison of arf2, gnc gnl and arf2 gnc gnl transcriptomes
GEO Series GSE35730. Arabidopsis thaliana. 12 samples. Type: Expression profiling by array.
Comparison of miRNA transcriptomes reveals differential regulation at four different ages in Sika Deer testes
GEO Series GSE188369. Cervus nippon. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptome of human foetal heart for comparison with cardiomyocytes from pluripotent stem cells
GEO Series GSE71148. Homo sapiens. 20 samples. Type: Expression profiling by array.
Transcriptome comparison between Bacillus cereus ATCC 10987 cells with and without iron starvation
GEO Series GSE74045. Bacillus cereus ATCC 10987. 24 samples. Type: Expression profiling by array.
Transcriptome analysis of thymic APC subsets, mTECs and thymic DCs in comparison to splenic DCs
GEO Series GSE67834. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Comparison of transcriptomic profiles of macrophages cultures without ILC2, in presence of ILC2 from uninfected mice, and in presence of ILC2 from MuHV-4 infected mice.
GEO Series GSE218245. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Comparison of transcriptomes in class-B GATA mutants with cytokinin treatments
GEO Series GSE71828. Arabidopsis thaliana. 29 samples. Type: Expression profiling by array.
Transcriptomic comparison of Listeria monocytogenes EGDe and its ΔlftR mutant
GEO Series GSE118775. Listeria monocytogenes EGD-e. 6 samples. Type: Expression profiling by high throughput sequencing.
Comparison of intestinal epithelial transcriptomes of WT and FACI-/- mice
GEO Series GSE193731. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing for transcriptome comparison between HTLV-1 Tax(-) and Tax(+) cells in Adult T-cell leukemia cell lines (MT-1 and KK-1)
GEO Series GSE108601. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome comparison of RhoP23H/+ mouse retina with wildtype at different age
GEO Series GSE281959. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Comparison of the transcriptome response within the tracheobronchial lymph node following infection with Porcine Reproductive and Respiratory Syndrome Virus, Porcine Circovirus 2 or Swine Influenza
GEO Series GSE111378. Sus scrofa domesticus. 16 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.