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Supplementary material 2 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Supplementary material 2 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
FIGURE 4 in Thirty years of progress in research on jumping tree bugs and the World checklist of Isometopinae (Hemiptera: Heteroptera: Miridae)
FIGURE 4. Fossil representatives of Isometopinae. A. Electromyiomma polonicum; B. Archemyiomma schaeferi; C. Hoffheinsoria robusta; D, E. Clavimyiomma henryi.
FIGURE 3 in Thirty years of progress in research on jumping tree bugs and the World checklist of Isometopinae (Hemiptera: Heteroptera: Miridae)
FIGURE 3. Living specimens of Isometopinae in their natural habitat (Singapore). A & B. Gigantometopus spp.; C. Unknown Gigantometopini; D & E. Unknown Isometopini; F. Isometopus sp., nymph; G. Alcecoris sp.; H. Alcecoris sp., nymph. Photo credits: David Ball (A, D); Melvyn Yeo (B, C, G, H); KS Tan (E, F).
FIGURE 2 in Thirty years of progress in research on jumping tree bugs and the World checklist of Isometopinae (Hemiptera: Heteroptera: Miridae)
FIGURE 2. Habitus of representatives of five extant Isometopinae tribes. A. Diphleps unica Bergroth, 1924 (Diphlebini); B. Bruneimetopus simulans Taszakowski, Kim & Herczek, 2020 (Gigantometopini); C. Isometopus mirificus Mulsant & Rey, 1879 (Isometopini); D. Myiomma milleri (Hoberlandt, 1959) (Myiommini); E. Sophianus palawanensis Taszakowski, Kim & Herczek, 2021 (Sophianini).
Supplementary material 1 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 1 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 8 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 8 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 5 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 5 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 6 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 6 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 2 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 2 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 3 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 3 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 4 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 4 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 7 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
Supplementary material 7 from: Collins N, Lightfoot DC (2022) A new species of tree cricket (Orthoptera, Gryllidae, Oecanthinae) from Chihuahuan Desert gypsum dunes in the United States and a key to the nigricornis species group. Journal of Orthoptera Research 31(2): 181-189. https://doi.org/10.3897/jor.31.79036
What is the current extent of our systematic knowledge? A case study in synthesizing phylogenetic data for building large trees to advance phylogenetic research in Orobanchaceae
To date, no comprehensive phylogenetic analyses have been conducted in Orobanchaceae that include both a wide generic sampling and a large sampling of species. Here, we utilize a recently developed set of tools for synthesizing publicly available data, and apply these to assess where the gaps in our phylogenetic knowledge exist in the angiosperm clade Orobanchaceae. We then use the resulting timetree to investigate diversification dynamics in this clade of mostly parasitic plants. We used the PyPHLAWD pipeline and RAxML to assemble a supermatrix of >900 species and construct a comprehensive phylogenetic hypothesis of Orobanchaceae. Divergence times were estimated with penalized likelihood from a 'congruified' set of secondary calibrations, and diversification dynamics were investigated in both trait-independent and trait-dependent (parasitic habit) contexts with BAMM and HiSSE. We sampled 39.8% of described species from 80 of 108 genera, representing all eight primary clades of Orobanchaceae. Relationships and divergence time estimates were similar to previous, clade-specific studies; however, eight genera were recovered as non-monophyletic, and will require focused systematic attention. Ours is first Orobanchaceae wide study to use model based approach to assess diversification dynamics in the parasitic lineage. Our results reveal elevated diversification rates associated with hemiparasitic habit, and holoparasitic habit was revealed to be an absorbing state, meaning that lineages within Orobanchaceae tend towards a reduction in photosynthetic towards hemiparasitism and finally holoparasitism. Using a synthetic phylogenetic hypothesis in conjunction with a unified taxonomic framework, we are able to understand where our taxonomic and phylogenetic knowledge is incomplete or conflicting, and we predict that this approach will aid in identifying where to focus future systematic efforts in any clade of interest. For Orobanchaceae, our phylogeny reflects the most recent taxonomy, and provides a new, comprehensive temporal framework for the clade that can serve as a stepping-stone for future macroevolutionary studies.
The LOTUS Initiative for Open Natural Products Research: biological and chemical trees
<p>Biological and chemical trees made from frozen metadata (<a href="https://doi.org/10.5281/zenodo.5794106">10.5281/zenodo.5794106</a>) (for example, for PubChem)</p>
Data from: Cross-sectional versus longitudinal research: a case study of trees with hollows and marsupials in Australian forests
Open the record for dataset details and reuse information.
Figs 18-20 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Figs 18-20 Sage tree cricket. 18. Adult male; 19. Adult female; 20. Raised tegmina of male preparing to sing.
Fig 29 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Fig 29 Seventeen-second waveform of two male sage tree crickets at 17.3°C. Areas of interest shown in Fig. 30a–e.
Figs 51-59 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Figs 51-59 Metanotal glands comparisons. 51.Oecanthus nigricornis; 52.O argentinus; 53.O. celerinictus; 54.O. forbesi; 55.O. salviisp. nov.; 56.O. quadripunctatus; 57.O. laricis; 58.O. pini; and 59.O. walkeri.
Figs 4-7 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Figs 4-7 Location of Oecanthus salviisp. nov. discovery. 4. Road to Lake Annie; 5. Eastern edge of lake with foot of Lake Annie Mountain; 6. Western edge of lake; and 7. Cattle drive along western shore.
Figs 37-42 from: Collins N, Schneider KR (2020) Oecanthus salvii sp. nov. (Orthoptera: Gryllidae: Oecanthinae): A new tree cricket species from Modoc County in northeast California. Journal of Orthoptera Research 29(1): 91-99. https://doi.org/10.3897/jor.29.50400
Figs 37-42 Shapes of copulatory blades in (v)-ventral and (d)-dorsal views. 37.Oecanthus walkeri; 38.O. nigricornis; 39.O. quadripunctatus; 40.O. argentinus; 41.O. salviisp. nov.; and 42.O. celerinictus.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.