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Figure 1 from: Triapitsyn SV, Adachi-Hagimori T, Rugman-Jones PF, Kado N, Sawamura N, Narai Y (2020) Egg parasitoids of Arboridia apicalis (Nawa, 1913) (Hemiptera, Cicadellidae), a leafhopper pest of grapevines in Japan, with description of a new species of Anagrus Haliday, 1833 (Hymenoptera, Mymaridae). ZooKeys 945: 129-152. https://doi.org/10.3897/zookeys.945.51865
Figure 1 Arboridia (Arboridia) apicalis and its damage to cultivated grapevines in Japan a adult (Takayama, Gifu Prefecture, Honshu Island) b heavy damage to grape leaves in a covered vineyard (Shimane Prefecture, Honshu Island, also c–f) c numerous adults on the underside of a grape leaf d nymphs on the underside of a grape leaf e light damage to a grape leaf by a few nymphs f heavy damage to a grape leaf.
Figure 6 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 6 Monthly and lunar phase distribution of recorded cetacean strandings (excluding Megaptera novaeangliae) along the coast of Espírito Santo state, southeast Brazil, from January 1975 to September 2015.
Figure 3 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 3 Geographic distribution of the least frequently stranded cetacean species along the coast of Espírito Santo state, southeast Brazil, from January 1975 to September 2015.
Figure 1 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 1 Physical, biological, and human characteristics of the coast of Espírito Santo state, southeast Brazil. Legend: A, B Location of Espírito Santo and Trindade and Martim Vaz Islands C human population density, major ports, isobaths, sea surface chlorophyll-a concentration, estuaries, and bays in the study area. Data sources: (Centro Internacional de Agricultura Tropical et al. 2005, Becker et al. 2009, NASA Earth Observatory 2019).
Figure 2 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 2 Geographic distribution of the six most frequently stranded cetacean species (excluding Megaptera novaeangliae) along the coast of Espírito Santo state, southeast Brazil, from January 1975 to September 2015. The limits of the Franciscana Management Areas (FMA) are shown in B.
Figure 5 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 5 Annual and latitudinal distribution of recorded cetacean strandings (excluding Megaptera novaeangliae) along the coast of Espírito Santo state, southeast Brazil, from January 1975 to September 2015.
Figure 4 from: Mayorga LFSP, Vanstreels RET, Bhering RCC, Mamede N, Costa LMB, Pinheiro FCF, Reis LWD, Trazzi A, Meirelles WLC, Ribeiro AM, Siciliano S (2020) Strandings of cetaceans on the Espírito Santo coast, southeast Brazil, 1975–2015. ZooKeys 948: 129-152. https://doi.org/10.3897/zookeys.948.50468
Figure 4 Species discovery curve for the number of cetacean species occurring in Espírito Santo waters based on stranding recordings.
Supplementary material 1 from: Schertler A, Rabitsch W, Moser D, Wessely J, Essl F (2020) The potential current distribution of the coypu (Myocastor coypus) in Europe and climate change induced shifts in the near future. NeoBiota 58: 129-160. https://doi.org/10.3897/neobiota.58.33118
Supplementary materials
Supplementary material 2 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Raw morphometric data and collection information
Supplementary material 1 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Tables S1, S2, S3. Sampling, genbank sequences and sequences of primers
Figure 1 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 1 Geographic distribution and morphotypes of Euphonia affinis, sampling, phylogeny, and haplotype networks. A geographic distribution of E. affinis: in blue E. a. godmani, in yellow E. a. affinis, and in red E. a. olmecorum (Geographic distribution modified from NatureServe shapefile in ArcGIS, ArcMAP 10.2.2; Esri, Redlands, CA, USA). Tissue sampling locations are indicated by circles in the map. Plumage morphotypes of E. a. godmani (female and male) with white undertail coverts, and E. a. affinis (female and male) with yellow undertail coverts. The previously proposed subspecies E. a. olmecorum (not shown) is similar to E. a. affinis, but paler plumage in females and a purple-blue back in males have been reported. B haplotype networks obtained for the mitochondrial gene ND2 and the nuclear genes ODC, MUSK, GAPDH intron 11, and BRM intron 15. Samples from the western distribution, assigned as E. a. godmani, are shown in blue and from the eastern distribution, assigned as E. a. affinis are indicated in yellow, E. a. olmecorum in red. C bayesian Inference concatenated phylogeny of E. a. godmani (west) and E. a. affinis-E. a. olmecorum (eastern Mexico, Central America).
Figure 4 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 4 Vocalization analysis. Boxplot of note emission rate A and PCA of measured vocal characters B Calls differ between the two groups in temporal structure, but not in frequency or number of notes.
Figure 6 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 6 Equivalence and similarity tests in environmental space for E. a. affinis and E. a. godmani. A PCA of Ecological niche for of E. affinis lineages and the variables contribution to the analyses. The gray gradient indicates the density of the occurrences of the lineages, and the dashed and solid line indicates the 50% and 100% of the environmental background B graphical results of the equivalency tests comparing the two lineages. For both tests (equivalence and similarity) we only presented values for the D metrics. For all graphs the D observed values of the overlap niche analyses are present with the black diamond. The p value is showing in each graphic, all of them not significant for these analyses C graphical results of the similarity test comparing the two lineages in both directions (E. a. affinis vs. E. a. godmani and vice versa), ns = Not significant, p > 0.05.
Figure 5 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 5 Ecological niche modelling and its projection in the geographic areas for E. a. affinis (yellow) and E. a. godmani (blue). In all four panels (a-d), the contribution values of each environmental variable of ENM's is illustrated in the left and the projection of the Ecological niche conditions in the geographic distribution area is shown in the maps. a Ecological Niche projected in the current geographic distribution area of E. affinis and E. a. godmani. b ENM's projected into the geography for each lineage. c ENM of E. a. affinis and E. a. godmani projected in the Last Maximum Glacial ecological conditions. d ENM of E. a. affinis and E. a. godmani projected in the Last Inter Glacial ecological conditions.
Figure 3 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 3 Morphometric analyses results. A) Females boxplots and PCA for WC, TLE, and BD morphometric characters. B) Males boxplot and PCA for WC, TLE, and BD morphometric characters. C) Boxplot and PCA for TL, BL, and BW. WC, TLE, and BD characters were analyzed by separated sex, because the analyses indicated sexual dimorphism (see results and Table 3). Bill length (BL, from the upper base of the bill to the tip of the upper mandible), bill width (BW), bill depth (BD, from the upper mandible to the base of the bill at the distal edge of the nostrils), wing chord (WC, distance from the carpal joint the tip of the longest primary), tarsus length (TL), and tail length (TLE, distance from the uropygial gland to the tip of the longest rectrix).
Figure 2 from: Vázquez-López M, Morrone JJ, Ramírez-Barrera SM, López-López A, Robles-Bello SM, Hernández-Baños BE (2020) Multilocus, phenotypic, behavioral, and ecological niche analyses provide evidence for two species within Euphonia affinis (Aves, Fringillidae). ZooKeys 952: 129-157. https://doi.org/10.3897/zookeys.952.51785
Figure 2 Ultrametric phylogenetic tree obtained by BEAST using ND2, ODC, and GAPDH concatenated matrix. The rhombus node represents the calibration point 17.1104 My with a 95% HPD of (14.7743, 19.6278) (see methods), dark gray circle node represents the E. affinis origin and light gray circle node represents the break between E. a. godmani and E. a. affinis. Above the branch the diversification dates (My) and in brackets the 95% HPD. Below branch the number indicated the posterior probability. The green area corresponds to the period when lowland dry forests had a greater expansion in Western Mexico.
Supplementary material 3 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure S2
Supplementary material 2 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure S1
Figure 7 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure 7 Hand and toes of adult male paratype, IAvH-Am-10271 of Pristimantis chamezensis sp. nov. in ethanol 70%. A Ventral view of foot B ventral view of hand. Scale bar: 2 mm. Photographs by Andrés Acosta-Galvis.
Figure 8 from: Acosta-Galvis AR, Saldarriaga-Gómez AM, Ramírez B, Vargas-Ramírez M (2020) A new Terrarana frog of genus Pristimantis from an unexplored cloud forest from the eastern Andes, Colombia. ZooKeys 961: 129-156. https://doi.org/10.3897/zookeys.961.51971
Figure 8 Geographic diversity of frogs of the genus Pristimantis in Colombia; the numerical values correspond to the number of species reported in each region.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.