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452 results for “Mitogenomics”
Supplementary material 2 from: Sullivan JP, Hopkins CD, Pirro S, Peterson R, Chakona A, Mutizwa TI, Mukweze Mulelenu C, Alqahtani FH, Vreven E, Dillman CB (2022) Mitogenome recovered from a 19 th Century holotype by shotgun sequencing supplies a generic name for an orphaned clade of African weakly electric fishes (Osteoglossomorpha, Mormyridae). ZooKeys 1129: 163-196. https://doi.org/10.3897/zookeys.1129.90287
Heteromormyrus pauciradiatus holotype NMW 22417 mitogenome reconstruction
Supplementary material 1 from: Sullivan JP, Hopkins CD, Pirro S, Peterson R, Chakona A, Mutizwa TI, Mukweze Mulelenu C, Alqahtani FH, Vreven E, Dillman CB (2022) Mitogenome recovered from a 19 th Century holotype by shotgun sequencing supplies a generic name for an orphaned clade of African weakly electric fishes (Osteoglossomorpha, Mormyridae). ZooKeys 1129: 163-196. https://doi.org/10.3897/zookeys.1129.90287
List of Heteromormyrus specimens examined and/or included in molecular analyses
Supplementary material 4 from: Sullivan JP, Hopkins CD, Pirro S, Peterson R, Chakona A, Mutizwa TI, Mukweze Mulelenu C, Alqahtani FH, Vreven E, Dillman CB (2022) Mitogenome recovered from a 19 th Century holotype by shotgun sequencing supplies a generic name for an orphaned clade of African weakly electric fishes (Osteoglossomorpha, Mormyridae). ZooKeys 1129: 163-196. https://doi.org/10.3897/zookeys.1129.90287
COI phylogenetic analysis
Figure 1 in Mitogenomes resolve the phylogeography and divergence times within the endemic New Zealand Callaeidae (Aves: Passerida)
Figure 1. Callaeidae, or New Zealand wattlebirds, showing key phenotypic differences between North and South Island forms of Philesturnus and Callaeas. Differences in plumage between North and South Island Philesturnus are exaggerated for clarity.
FIGURE 5 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 5. Relative synonymous codon usage (RSCU) of the mitogenomes of C. barbarus.
FIGURE 2 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 2. AT-skews and GC-skews of 13 PCGs of the C. barbarus mitogenome.
FIGURE 3 in Complete mitogenome of Calliptamus barbarus Costa (Orthoptera: Acrididae) and its phylogeny in Acridoidea
FIGURE 3. Secondary structures of tRNAs in the mitochondrial genome of C. barbarous.
Supplementary material 1 from: Sun T, Zou W, Dong Q, Huang O, Tang D, Yu H (2022) Morphology, phylogeny, mitogenomics and metagenomics reveal a new entomopathogenic fungus Ophiocordyceps nujiangensis (Hypocreales, Ophiocordycipitaceae) from Southwestern China. MycoKeys 94: 91-108. https://doi.org/10.3897/mycokeys.94.89425
Relevant species information and GeneBank accession numbers for phylogenetic research in this study
Supplementary material 1 from: Ding X, Chen C, Wei J, Gao X, Zhang H, Zhao Q (2023) Comparative mitogenomics and phylogenetic analyses of the genus Menida (Hemiptera, Heteroptera, Pentatomidae). ZooKeys 1138: 29-48. https://doi.org/10.3897/zookeys.1138.95626
Supplementary information
FIGURE 2 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 2. The amino acid usage of the PCGs of Ultragryllacris and Homogryllacris yunnana.
FIGURE 9 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 9. Phylogenetic tree obtained from ML and BI analysis based on 13 protein-coding genes.
FIGURE 6. The secondary structures for 22 in Comparative mitogenome analysis and phylogenetic inference of the genus Ultragryllacris (Orthoptera: Gryllacrididae)
FIGURE 6. The secondary structures for 22 tRNA genes of the Homogryllacris yunnana XZ489.
Supplementary material 1 from: Jin Y-L, Nunes Godeiro N, Bu Y (2023) Description of the first species of Scutigerella (Symphyla, Scutigerellidae) from China, with mitogenomic and genetic divergence analysis. ZooKeys 1157: 145-161. https://doi.org/10.3897/zookeys.1157.99686
K2P distances between different speices of Symphyla analyzed by the mitochondrial COI gene
Supplementary material 1 from: Macher J-N, Šidagytė-Copilas E, Copilaș-Ciocianu D (2023) Comparative mitogenomics of native European and alien Ponto-Caspian amphipods. NeoBiota 87: 27-44. https://doi.org/10.3897/neobiota.87.105941
Origin of samples and mitochondrial genomes used in this study
Supplementary material 1 from: Wang S, Ding X, Yi W, Zhao W, Zhao Q, Zhang H (2023) Comparative mitogenomic analysis of three bugs of the genus Hygia Uhler, 1861 (Hemiptera, Coreidae) and their phylogenetic position. ZooKeys 1179: 123-138. https://doi.org/10.3897/zookeys.1179.100006
Supplementary information
Ancient mitogenomics clarifies radiation of extinct Mascarene giant tortoises (Cylindraspis spp.)
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Data from: Mitochondrial capture enriches mito-DNA 100 folds enabling PCR-free mitogenomics biodiversity analysis
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Data from: Concordance analysis in mitogenomic phylogenetics
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Data from: Mitogenomics of the Old World monkey tribe Papionini
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Data from: In-solution hybridization for mammalian mitogenome enrichment: pros, cons and challenges associated with multiplexing degraded DNA
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.