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608 results for “Species recognition”
Supplementary material 3 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
: Data type: multimedia
Supplementary material 1 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
: Data type: occurrence
Figure 6 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 6 Association network between lichen mycobionts of P. omphalodes group (i.e. Parmelia discordans, P. omphalodes and P. pinnatifida) and photobiont OTUs. The line width is proportional to the number of specimens forming the association with the particular OTU. SUn1 and SUn2 represent unnamed lineages of Trebouxia belonging to clade S.
Figure 3 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 3 Haplotype network showing relationships between ITS rDNA sequences from Parmelia discordans and P. omphalodes. The names of species are followed with herbarium numbers of specimens or GenBank Accession Numbers. Mutational changes are presented as numbers in brackets near lines between haplotypes.
Supplementary material 2 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
: Data type: multimedia
Figure 2 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 2 Phylogenetic placement of Trebouxia photobionts from selected Parmelia spp., based on Bayesian analysis of the ITS rDNA dataset. Posterior probabilities and maximum likelihood bootstrap values are shown near the internal branches. Newly generated sequences are in bold, with collecting numbers preceding the species names. Representative Trebouxia OTUs, as described in Leavitt et al. (2015), were downloaded from Dryad database (Dryad Digital Repository, Leavitt et al. 2015). Clades with photobionts from Parmelia discordans, P. omphalodes and P. pinnatifida are highlighted.
Figure 5 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 5 AParmelia discordans, with marginal and laminal pseudocyphellae, laminal pseudocyphellae mostly not connected with marginal ones (S F-252494) BP. omphalodes, with marginal and laminal pseudocyphellae, laminal pseudocyphellae mostly not connected with marginal ones (S F-252845) CP. pinnatifida, with marginal pseudocyphellae (UGDA L-24298) DP. pinnatifida, with marginal and laminal pseudocyphellae, laminal pseudocyphellae starting predominantly from pseudocyphellae formed at the edge of lobes (S F-239397). Scale bars: 200 μm (A, B, D), 150 μm (C).
Figure 7 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 7 Distribution of suitable niches of P. discordans (A), P. omphalodes (B) and P. pinnatifida (C) in the Northern Hemisphere.
Figure 4 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 4 Localities of Parmelia discordans (red), P. omphalodes (blue) and P. pinnatifida (green) used in ENM analysis.
Figure 10 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 10 Principal components analysis (PCA) of P. discordans (red), P. omphalodes (blue) and P. pinnatifida (green), based on the bioclimatic factors from individuals.
Figure 1 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 1 Phylogenetic relationships of Parmelia discordans, P. omphalodes and P. pinnatifida, based on Bayesian analysis of the ITS rDNA dataset. Posterior probabilities and maximum likelihood bootstrap values are shown near the internal branches. Newly generated sequences are described with herbarium numbers following the species names. GenBank Accession numbers of sequences downloaded from GenBank follow the species names. Clades with Parmelia discordans, P. omphalodes and P. pinnatifida are highlighted.
Supplementary material 4 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
: Data type: multimedia
Figure 9 from: Ossowska E, Guzow-Krzemińska B, Kolanowska M, Szczepańska K, Kukwa M (2019) Morphology and secondary chemistry in species recognition of Parmelia omphalodes group – evidence from molecular data with notes on the ecological niche modelling and genetic variability of photobionts. MycoKeys 61: 39-74. https://doi.org/10.3897/mycokeys.61.38175
Figure 9 Distribution of suitable niches of P. discordans (A), P. omphalodes (B) and P. pinnatifida (C) in Eurasia.
Figure 8 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 8 Genitalia of Campiglossa paramelaena sp. nov. A epandrial complex, lateral view B epandrial complex, caudal view C glans and preglans of distiphallus D female postabdomen with aculeus and eversible membrane pulled out, ventral view E magnified view of aculeus tip F magnified view of oviscape and eversible membrane G spermatheca.
Figure 7 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 7 A–ECampiglossa paramelaena sp. nov. A male, lateral view B male, dorsal view C male wing D female, lateral view E female, dorsal view F female, wing G–KC. melaenaG male, lateral view H male, dorsal view I male, wing J holotype male, wing K female, wing J, K Reproduced from Korneyev and Ovchinnikova (2004) with permission from Valery Korneyev.
Figure 6 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 6 Genitalia of Campiglossa misellaA epandrial complex, lateral view B epandrial complex, caudal view C glans and preglans of distiphallus D female postabdomen with aculeus and eversible membrane pulled out, ventral view E magnified view of aculeus tip F magnified view of oviscape and eversible membrane G Spermatheca.
Figure 4 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 4 A–FCampiglossa coeiA male, lateral view B male, dorsal view C male wing D female, lateral view E female, dorsal view F female wing G–KC. misellaG male, lateral view H male, lateral view I male, dorsal view J female, lateral view K female, dorsal view.
Figure 3 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 3 The habitat of Campiglossa coei. CHINA: Yunnan, Mengsong, Manlvcunhanzudazhai, small hilltop, 22°07'44.0"N, 100°28'51.7"E, 1,690 m, 12 July 2011. Many more than 100 individuals of C. coei were collected along with at least ten other species of the subfamily Tephritinae.
Figure 5 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 5 Genitalia of Campiglossa coeiA epandrial complex, lateral view B epandrial complex, caudal view C glans and preglans of distiphallus D female postabdomen with aculeus and eversible membrane pulled out, ventral view E magnified view of aculeus tip F magnified view of oviscape and eversible membrane G spermatheca.
Figure 2 from: Han H-Y, Ro K-E (2019) DNA barcoding reveals a species group of the genus Campiglossa (Diptera, Tephritidae, Tephritinae) with recognition of a new species from East Asia and previously unknown females of Campiglossa coei (Hardy). ZooKeys 899: 1-36. https://doi.org/10.3897/zookeys.899.46779
Figure 2 MEGA X analysis produced a maximum-likelihood (ML) phylogram of the 76 selected Campiglossa (ingroup) and ten Tephritis (outgroup) DNA barcode sequences using the general time reversible model. The first number on each branch is the bootstrap support from ML analysis (pb); the second number represents posterior probability (pp) from Bayesian inference (BI). Samples in green letters were extracted from BOLD systems (www.boldsystems.org).
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International Brain Laboratory public data
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OpenNeuro
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