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Dataset results
410 results for “hybrid species”
Root transcript profiles of two Rorippa (Brassicaceae) species and their F1 hybrid after complete submergence
GEO Series GSE13641. Rorippa sylvestris; Rorippa amphibia; Rorippa anceps; Arabidopsis thaliana. 20 samples. Type: Genome variation profiling by array.
Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids
GEO Series GSE232450. Saccharomyces cerevisiae; Homo sapiens; Mus musculus; Saccharomyces cerevisiae x Saccharomyces paradoxus; Saccharomyces paradoxus. 144 samples. Type: Methylation profiling by high throughput sequencing.
Comparative genomic hybridization of Cronobacter sakazakii BAA-894 with other Cronobacter species
GEO Series GSE19308. Cronobacter sakazakii ATCC BAA-894; Cronobacter dublinensis; Cronobacter muytjensii; Cronobacter sakazakii; Cronobacter turicensis; Cronobacter malonaticus. 10 samples. Type: Genome variation profiling by genome tiling array.
Comparison of D. simulans/D. mauritiana F1 third instar male larvae hybrid expression values to pure-species parents
GEO Series GSE5592. Drosophila sechellia; Drosophila simulans; Drosophila mauritiana; Drosophila simulans x Drosophila mauritiana. 22 samples. Type: Expression profiling by array.
Comparison of cross-species and species-specific hybridizations
GEO Series GSE3584. Solanum tuberosum; Solanum lycopersicum. 16 samples. Type: Expression profiling by array.
Comparison of D. simulans/D. sechellia third instar male larvae hybrid expression values to pure-species larvae parents
GEO Series GSE5598. Drosophila mauritiana; Drosophila sechellia; Drosophila simulans; Drosophila sechellia x Drosophila simulans. 22 samples. Type: Expression profiling by array.
Comparative Genomic Hybridization of E. coli and Shigella species to determine the relatedness of isolates from Neobladders
GEO Series GSE27326. Shigella; Shigella dysenteriae; Shigella sonnei; Shigella boydii; Escherichia coli; Shigella flexneri. 30 samples. Type: Genome variation profiling by array.
FIGURE3. Variable sites within the 740 in Reply to Andrew Brower's critique of the evidence for hybridization among Heliconius butterfly species in the wild
FIGURE3. Variable sites within the 740 bp Tektin sequence data. For the Genbank sequences from H. melpomene, H. ethilla, and the putative hybrid specimen, all variant sites are shown in order along the 740 bp Tektin partial sequence, with uninformative fixed intervening bases omitted. Variants and two-fold ambiguous (i.e. heterozygous) sites are shown in bold. The following two-fold IUPAC ambiguity codes were found in hybrid 06-921: Y = C/T, R = A/G, K = G/T. For comparison, also shown are aligned bases obtained by BLAST for the haploid whole genome assemblies in Lepbase 4 from two related species H. timareta, and H. pardalinus (Challis et al. 2016).
FIGURE 7. Kalanchoe laetivirens. A–B in Aspects of the taxonomy of the Kalanchoe daigremontiana species complex (Crassulaceae subfam. Kalanchooideae) and associated interspecific hybrids in southern Madagascar, with the description of a new nothospecies, K. ×descoingsii (=K. laetivirens × K. tubiflora)
FIGURE 7. Kalanchoe laetivirens. A–B. Plants growing in habitat, in the Isalo Massif, Madagascar, with some desiccated peduncles visible, showing the colouration and growth habit characteristic of the species. C–D. Plant grown in culture, in Israel, showing the characteristic light green colouration, often pinkish abaxial leaf surface, a multitude of bulbils and bulbil pedestals per leaf, erect leaf blade base auricles, basally thick stem and leaf petioles, and pink flowers with a small calyx and a calyx tube about as long as the free sepal segments. Photographs: A–B, Jun Ikeda; C–D, Ronen Shtein.
Fig. 2 a—k Gagea jensii spec. nov. a in New insights into the phylogeny and taxonomy of Chinese species of Gagea (Liliaceae)-speciation through hybridization
Fig. 2 a—k Gagea jensii spec. nov. a Flowering plant; b peduncle, cross-section; inner channel partly filled with dry parenchyma; c cross-section of basal leaves at various levels; d cross-section, lower part of a middle stem leaf; e juvenile plant originating from a bulbil in its 1st year; f cross-section through the single basal leaf; g bulb of a weak vegetative plant with one bulbil; h, h′ the same in dorsal and lateral view, outer tunic removed; i inflorescence with one mature capsule, the second flower often fails to set seed; j capsule seen from above; k seed in lateral view; chalaza at the right; k′ seed seen from the chalazial end
Fig. 6 in New insights into the phylogeny and taxonomy of Chinese species of Gagea (Liliaceae)-speciation through hybridization
Fig. 6 Neighbor net (NN) splits graph of pCOS At103 clones of G. davlianidzeae 1A, 2A, 2B, 3B (dav) and G. nigra 1B, 4D (nig) of Gagea sect. Minimae. For further taxon information see Appendix 1.
Fig. 7 Haplotype network for 20 in New insights into the phylogeny and taxonomy of Chinese species of Gagea (Liliaceae)-speciation through hybridization
Fig. 7 Haplotype network for 20 cpDNA haplotypes (psbA- trnH IGS+trnL-trnF IGS) including 33 sequences of representatives of Gagea sect. Minimae: G. confusa (con), G. davlianidzeae (dav), G. filiformis (fil), G. granulosa (gran), G. minima (min), and G. nigra (nig, for further details, see Appendix 1 and Table 2). Circle size corresponds to the number of taxa possessing the haplotype. Empty circles refer to missing intermediates not found in the analyzed sequences
Fig. 1 a—g Gagea angelae spec. nov. a in New insights into the phylogeny and taxonomy of Chinese species of Gagea (Liliaceae)-speciation through hybridization
Fig. 1 a—g Gagea angelae spec. nov. a Whole flowering plant lacking bulbils; b bulb of a strong vegetative plant, developing a stolon with a group of bulbils at the tip; remnants of the stolon of the previous year are visible at the opposite side of the parent bulb (arrow); c tetrangular cross section of the peduncle of a flowering plant below the inflorescence; d cross-section of the middle part of the basal leaf; e tip of the basal leaf; f cross-section of the lower floral leaf, arrows in c, d, and f indicate subepidermal sclerenchyma; g flower, two perianth leaves removed to show the ovary
FIGURE 3 in Citrus × pubinervia, a new natural hybrid species from central China
FIGURE 3. The phylogram of Bayesian inference (BI) tree from the combined data of matK, rbcL-atpB, trnL-trnF and psbA-trnH. Values above the branches represent bootstrap values (LP, %) for maximum likelihood and Bayesian posterior probabilities (PP), respectively; the dash (–) indicates LP <50%
Comparison of D. simulans/D. sechellia F1 male hybrid genome-wide expression values to pure-species parents
GEO Series GSE5607. Drosophila sechellia; Drosophila simulans; Drosophila sechellia x Drosophila simulans; Drosophila melanogaster. 22 samples. Type: Expression profiling by array.
Comparison of D. simulans/D. mauritiana F1 male hybrid custom expression values to pure-species parents
GEO Series GSE5599. Drosophila simulans; Drosophila mauritiana; Drosophila sechellia; Drosophila simulans x Drosophila mauritiana. 22 samples. Type: Expression profiling by array.
Analysis of five species of Gossypium allotetraploids and a synthetic F1 hybrid compared to model diploid projenitors
GEO Series GSE17927. Gossypium barbadense; Gossypium raimondii; Gossypium darwinii; Gossypium tomentosum; Gossypium; Gossypium hirsutum; Gossypium arboreum; Gossypium mustelinum. 27 samples. Type: Expression profiling by array.
Comparison of D. simulans/D. mauritiana F1 male hybrid genome-wide expression values to pure-species parents
GEO Series GSE5601. Drosophila simulans; Drosophila mauritiana; Drosophila melanogaster; Drosophila simulans x Drosophila mauritiana. 22 samples. Type: Expression profiling by array.
Hybrid lizards with introgressed mtDNA show resistance to DNA damage from Reactive Oxygen Species
GEO Series GSE255990. Urosaurus ornatus; Urosaurus graciosus. 18 samples. Type: Expression profiling by high throughput sequencing.
Novel gene discovery in up to 10 ETEC strains and production of species microarray. Discovery of conserved and unique ETEC genes by comparative genome hybridization studies.
GEO Series GSE25601. Escherichia coli. 216 samples. Type: Genome variation profiling by array.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.