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Characterizing Novel Olfactory Receptors Expressed in the Murine Renal Cortex: Supplemental Table S2
<p><strong>Olfactory receptors selected for study. </strong>Olfactory receptors (ORs) selected for study based on mapped reads in at least 7 out of 8 murine renal cortex samples. Murine samples are listed as A - M. Samples A - G were fed high fat diet, while samples I - M were fed control diet. (mm10) FPKM counts for ORs selected for study based on the GRCm30/mm10 genome build using previously published OR coordinates. ORs are listed using the "Olfr" gene names, as well as the "CUFFOR" names as determined by Ibarra-Soria X et al. (mm9) FPKM counts for ORs selected for study based on the NCBI37/mm9 genome build using established coordinates. ORs listed in green were identified and cloned from kidney RNA previously.</p> <p> </p> <p>Data accessible at NCBI GEO database, accession number GSE117249<br> https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE117249</p>
Identification of novel genes involved in phosphate accumulation in Lotus japonicus through Genome Wide Association mapping of root system architecture and anion content
<p>130 Lotus japonicus accessions were used. The names and accession numbers are<br> listed in S6 Table. Seeds were scarified with sandpaper and then sterilized 14 minutes in 0.05%<br> sodium hypochlorite. Subsequently, seeds were rinsed and washed 5 times in sterile distilled<br> water. For the germination, seeds were positioned in imbibed filter paper, in sterile Petri dishes,<br> and wrapped in aluminium foil. After 3 days at 21°C, young seedling were transferred to square<br> plates (12 x 12 cm) containing growth medium. Both media used in this<br> study were based on Long-Ashton solution (with two levels of phosphate concentration -20 or<br> 750 μM, LP or HP, respectively) with 0.8% MES buffer (Duchefa Biochemie,<br> Haarlem, The Netherlands), 0.8% agarose (to minimize phosphate contamination), and adjusted<br> to pH 5.7 with 1M KOH. After adding the medium, plates were dried, closed, overnight in a<br> sterile laminar flow hood. Two accessions, with four replicates per each accession, were placed<br> on each plate. Each plate was replicated, with mirrored position of each accession to minimize<br> any positional growth effects. Plates were placed vertically, and plants grown under long-day<br> conditions (21°C, 16 h light/8 h dark cycle) with white light bulbs emitting 50 μmol/m 2 /s and<br> roots were exposed to light. Every day at the same time, the racks were transported to the image<br> acquisition room where images of each plate were acquired with eight Epson V600 CCD flatbed<br> color image scanners (Seiko Epson) and then immediately returned to the growth chamber.</p>
Fig. 2 in Molecular Phylogenetics Evidence for a Novel Lineage of Amoebae Within Discosea (Amoebozoa: Lobosa)
Fig. 2. Maximum-Likelihood SSU tree of subphylum Lobosa, with emphasis on major representatives of the class Discosea. The monophyletic resolution of Flabellinia and Longamoebia was obtained after omitting unstable taxa Stygamoeba and Vermistella (see Fig. 1). Members of the class Tubulinea were used as outgroup. Bootstrap values (BV) for ML/NJ/MP were presented at nodes; filled circles – 100% BV with all methods; * – node supported but BV <40%. For acc. nos. – see Fig. 1.
Fig. 1 in Molecular Phylogenetics Evidence for a Novel Lineage of Amoebae Within Discosea (Amoebozoa: Lobosa)
Fig. 1. Maximum-Likelihood tree based on SSU rDNA of major representatives of the subphylum Lobosa and the class Discosea, following the classification of Smirnov et al. (2011). Members of the class Tubulinea were used as outgroup. Subclasses and orders were indicated, and for Dermamoebida families also. Bootstrap values (BV) for ML/NJ/MP were presented at nodes; filled circles – 100% BV with all methods; * – node supported but BV <40%.
Figure 4 in Wafers in Saddle Bags: A Novel Dispensing System for Male Lures Used to Detect Invasive Fruit Flies (Diptera: Tephritidae)
Figure 4. Captures of Ceratitis capitata males in Jackson traps baited with either a polymeric plug containing 2 g TML or a saddle-bag containing 6 g TML at an Oahu (A) coffee field (wild males) or (B) citrus orchard (released males). Symbols represent means + 1 SE, where n = 15 traps per treatment per weathering interval at the coffee field and n = 12 at the citrus orchard. For a given weathering interval, means marked by different letters were significantly different (P <0.05, Holm-Šídák test).
Figure 3 in Wafers in Saddle Bags: A Novel Dispensing System for Male Lures Used to Detect Invasive Fruit Flies (Diptera: Tephritidae)
Figure 3. Captures of Bactrocera dorsalis males in Jackson traps baited with either a cotton wick containing 6 mL ME or a saddle-bag containing 6 g ME at study sites on Hawaii island or Oahu. Both fresh and aged wicks were deployed on Hawaii, but only fresh wicks were deployed on Oahu. Symbols represent means + 1 SE, where n = 15 traps per treatment per weathering interval for both study sites. For a given weathering interval, means marked by different letters were significantly different (P <0.05, Holm-Šídák test).
Figure 2 in Wafers in Saddle Bags: A Novel Dispensing System for Male Lures Used to Detect Invasive Fruit Flies (Diptera: Tephritidae)
Figure 2. Saddle bag dispensers. Top row (l to r): ME saddle bag in hand, with DDVP saddle bag on hanger; placement of ME saddle bag over DDVP saddle bag; hanger positioned inside Jackson trap. Bottom row (l to r): TML saddle bag in hand; TML saddle bag placed on hanger; hanger positioned inside Jackson trap.
Figure 1 in Wafers in Saddle Bags: A Novel Dispensing System for Male Lures Used to Detect Invasive Fruit Flies (Diptera: Tephritidae)
Figure 1. Standard method of baiting Jackson traps. Top row: Cotton wick containing ME in perforated basket and basket positioned inside Jackson trap. Bottom row: Polymeric plug containing TML in perforated basket and basket positioned inside Jackson trap.
Fig. 6. Batrachocamallanus xenopodis, photomicrographs. A in Novel information on the morphology, phylogeny and distribution of camallanid nematodes from marine and freshwater hosts in South Africa, including the description of Camallanus sodwanaensis n. sp.
Fig. 6. Batrachocamallanus xenopodis, photomicrographs. A – male, general view; B – anterior part of body, male, apical view; C – optical section at base of buccal capsule level, male, apical view; D – buccal capsule, female, lateral view; E – female, general view; F – posterior part of body, male, lateral view; G – part of body at vulva region, lateral view; H – posterior part of body, female, lateral view. Scale bars: A, E, F–H – 100, B–D – 50.
Fig. 8 in Novel information on the morphology, phylogeny and distribution of camallanid nematodes from marine and freshwater hosts in South Africa, including the description of Camallanus sodwanaensis n. sp.
Fig. 8. Phylogenetic tree of Camallanidae nematodes based on 491 nucleotides long alignments of 28 rDNA gene. Nodal support presented for Bayesian Inference and Maximum Likelihood analyses (BI/ML).
Fig. 3. Paracamallanus cyathopgharynx, photomicrographs. A in Novel information on the morphology, phylogeny and distribution of camallanid nematodes from marine and freshwater hosts in South Africa, including the description of Camallanus sodwanaensis n. sp.
Fig. 3. Paracamallanus cyathopgharynx, photomicrographs. A – anterior part of body, male, lateral view; B – buccal capsule, male, lateral view; C – anterior part of body, male, apical view; D – female, general view; E - optical section at level of buccal capsule valves mid-length, male, dorsal view; F - part of body at vulva region, lateral view; G – posterior end of body, female, lateral view; H – posterior end of body, male, lateral view. Scale bars: A–C, E–H – 100; D – 1 mm.
Fig. 1. Camallanus sodwanaensis n in Novel information on the morphology, phylogeny and distribution of camallanid nematodes from marine and freshwater hosts in South Africa, including the description of Camallanus sodwanaensis n. sp.
Fig. 1. Camallanus sodwanaensis n. sp., line-drawings. A – anterior part of body, female, lateral view; B – buccal capsule, female, lateral view; C – anterior part of body, female, apical view; D – posterior part of body, male, ventral view; E – dorsal trident, male, lateral view; F – posterior part of body, female, lateral view; G – spicules, lateral view. Scale bars: A – 500; B–D, F–G – 100; E – 50.
Fig. 2. Camallanus sodwanaensis n in Novel information on the morphology, phylogeny and distribution of camallanid nematodes from marine and freshwater hosts in South Africa, including the description of Camallanus sodwanaensis n. sp.
Fig. 2. Camallanus sodwanaensis n. sp., photomicrographs. A – male, general view; B – anterior part of body, female, lateral view; C – buccal capsule, female, lateral view; D – optical section at level of buccal capsule valves mid-width, male, dorsal view; E – dorsal trident, male, dorsal view; F – anterior part of body, female, apical view; G - optical section at level of buccal capsule valves mid-length, male, apical view; H – right spicule, lateral view; I – posterior end of body, male, ventral view; J – part of body at vulva region, lateral view; K – posterior end of body, female, lateral view. Scale bars: A – 1 mm, B – 500, C–K – 100.
Figure 4 in A novel species of sisorid catfish, Pseudecheneis nagalandensis sp. nov., (Teleostei: Sisoridae) from the Chindwin Basin of Nagaland, India
Figure 4. Genital papilla of Pseudecheneis nagalandensis sp. nov., a. male, ZSI FF 7679, 58.7 mm SL; b. female ZSI FF 7680, 36.1 mm SL.
Figure 2 in A novel species of sisorid catfish, Pseudecheneis nagalandensis sp. nov., (Teleostei: Sisoridae) from the Chindwin Basin of Nagaland, India
Figure 2. Thoracic adhesive apparatus of Pseudecheneis nagalandensis sp. nov., showing laminae and sulcae.
Figure 1 in A novel species of sisorid catfish, Pseudecheneis nagalandensis sp. nov., (Teleostei: Sisoridae) from the Chindwin Basin of Nagaland, India
Figure 1. Pseudecheneis nagalandensis sp. nov., holotype, ZSI FF 7679, 58.7 mm SL; a. dorsal, b. lateral and c. ventral view.
Novel benzotriazole-nanomaterials for maritime applications: comparative anti-corrosion performance, environmental behavior, and hazard
<div>The present dataset contains chemical, characterization, and ecotoxicological data upon exposure of benzotriazole (BTA) in the soluble form and nanoforms (Mg-Al LDH-BTA and Zn-Al LDH-BTA). Chemical analyses data include the quantification of relevant anions (nitrites, nitrates, phosphates and chlorides, determined through High-Performance Liquid Chromatography) and target metals (Al, Mg and Zn) determined through Inductively Coupled Plasma Optical Emission Spectrometry). Characterization data include DLS (size) and zeta potential analysis. Ecotoxicological data includes acute and chronic endpoints determined in a wide-range of marine species.</div> <div> </div> <div> </div> <div> </div>
Environmental behavior of novel "smart" anti-corrosion nanomaterials in a global change scenario
<div>The present dataset contains dynamic light scattering data and quantification of anions (corrosion inhibitors) and target metals (Zn and Al) in saltwater dispersions aiming to assess and compare the environmental behavior of four anti-corrosion nanomaterials in the following conditions: “temperate seawater” (T=20 ºC, pH=8.0, without HA); “tropical seawater” (T=30 ºC, pH=8.0, without HA), “acidified temperate seawater” (T=20 ºC, pH=7.6, without HA), “acidified tropical seawater” (T=30 ºC, pH 7.6, without HA); “temperate seawater enriched with natural organic matter (NOM)” (T=20 ºC, pH=8.0, with HA); “tropical seawater enriched NOM” (T=30 ºC, pH=8.0, with HA).</div> <div> </div> <div> </div>
Figure 1. Prostaglandin E 2 in The role of a novel Wolbachia (Rickettsiales: Anaplasmataceae) synthetic peptide, WolFar, in regulating prostaglandin levels in the hemolymph of Acheta domesticus (Orthoptera: Gryllidae)
Figure 1. Prostaglandin E 2 activity of Acheta domesticus at different postinjection times relative to the concentrations of WolFar applied. Each point represents the mean ± SE.
Figure 2 in The role of a novel Wolbachia (Rickettsiales: Anaplasmataceae) synthetic peptide, WolFar, in regulating prostaglandin levels in the hemolymph of Acheta domesticus (Orthoptera: Gryllidae)
Figure 2. Formation of nodules in the internal system and fat body of Acheta domesticus following injections of 100% concentration of WolFar. The red triangles indicate the positions of the nodules. A: Negative control; B: at 24 h; C: at 48 h; D: at 72 h.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.