Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
429
datasets available to search
ShareScore release 0.7.1
Dataset results
429 results for “Bacterial infection”
Effector TH17 cells give rise to long-lived TRM cells that are essential for an immediate response against bacterial infection
GEO Series GSE130446. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of the spleen reveals differences in the mechanisms of resistance to bacterial infection between different chicken breeds
GEO Series GSE242458. Gallus gallus. 10 samples. Type: Expression profiling by high throughput sequencing.
Quantitative omics reveals that type I and II IFNs alter bacterial vacuole compositions to restrict infection in macrophages and lungs
GEO Series GSE60085. Mus musculus. 20 samples. Type: Expression profiling by array.
Histone deacetylase 3 facilitates TNF α -mediated NF-κB activation through suppressing CTSB induced RIP1 degradation and is required for host defense against bacterial infection [ChIP-seq]
GEO Series GSE198218. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Human patients with influenza virus and bacterial infections
GEO Series GSE185576. Homo sapiens. 152 samples. Type: Expression profiling by array.
Caspase-1-licensed lung epithelial cell pyroptosis drives infiltrating neutrophil necroptosis to dampen immune defense against pulmonary bacterial infection
GEO Series GSE242879. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Expanded Access to Cefiderocol for the Intravenous Treatment of Severe Gram Negative Bacterial Infections
ClinicalTrials.gov study NCT03780140. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Personalized Phage Treatment in Covid-19 Patients With Bacterial Co-Infections Microbials for Pneumonia or Bacteremia/Septicemia
ClinicalTrials.gov study NCT04636554. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Exploratory pilot study on transcriptome analysis in blood and urine for identifying potential miRNA biomarker candidates to dustinguish of bacterial vs. viral infections in children with fever
GEO Series GSE290432. Homo sapiens. 22 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Enhancer-instructed chromatin folding and compartmentalization dictate Vκ repertoire rearrangement to combat bacterial infection [CUT&RUN]
GEO Series GSE193822. Mus musculus. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Bacterial infections shape cardiac macrophages’ response to ischemia
GEO Series GSE301781. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Mitochondrial fission mediates an evolutionarily conserved innate defense response against bacterial infection
GEO Series GSE225734. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Antibiotic use during influenza infection augments lung eosinophils that impair lung immunity against secondary bacterial pneumonia
GEO Series GSE259429. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Enhancer-instructed chromatin folding and compartmentalization dictate Vκ repertoire rearrangement to combat bacterial infection
GEO Series GSE193968. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Determining the Injury-Associated Microbial Nutrients that Facilitate Secondary Bacterial Infection in Acutely Injured Lungs
GEO Series GSE278542. Pseudomonas aeruginosa. 18 samples. Type: Expression profiling by high throughput sequencing.
Expression data from bacterial co-infection study in mice
GEO Series GSE30974. Mus musculus. 4 samples. Type: Expression profiling by array.
Transcriptional profiling of rice gene expression changes upon co-infection with insect Orseola oryza and pathogen Xanthomonas oryzae pv. oryzae that causes gall midge and bacterial blight respectivel
GEO Series GSE110068. Oryza sativa. 6 samples. Type: Expression profiling by array.
Bacterial infection disrupts established germinal center reactions through monocyte recruitment and impaired metabolic adaptation [Bulk RNA-seq]
GEO Series GSE188474. Mus musculus. 47 samples. Type: Expression profiling by high throughput sequencing.
Coupling ER stress to STAT1-mediated immunity against bacterial infection
GEO Series GSE287755. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
USP2 promotes experimental colitis and bacterial infections by inhibiting the proliferation of myeloid cells and remodeling the extracellular matrix network
GEO Series GSE208325. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.