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Figure 1 in Identification and partial characterization of a novel serpin from Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea)
Figure 1. (A) Alignment of the EnSerp1 sequence with four of the most similar serpin sequences of other platyhelminths: 1, EnSerp1 from Eudiplozoon nipponicum (GenBank: MF288891.1); 2, Echinococcus multilocularis (GenBank: CDS35969.1); 3, Schistosoma haematobium (GenBank: XP_012797533.1); 4, Echinococcus granulosus (GenBank: CDS22753.1); 5, Taenia solium (GenBank: ATG83400.1). Conserved motifs characteristic for serpins are highlighted. The serpin motif (E342 – E346) shown in red is part of the reactive centre loop (RCL, A347 – N365), shown in green. Immediately after RCL, follows serpin signature (F366 – I376) in yellow. Scissile bond is situated within the RCL between P1 (F358) and P1' (C359) residue, shown in magenta. (B) Predicted 3D structure of EnSerp1. Coloured areas of the molecule correspond to the sequence highlighted in Figure 1A. (C) RCL and β-sheet A. After the peptidase cleaves the scissile bond within RCL (in orange), the residual part of RCL is incorporated as a new strand into β-sheet A (in cyan).
Figure 4 in Identification and partial characterization of a novel serpin from Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea)
Figure 4. The inhibitory effect of rEnSerp1 on selected SPs. (A) trypsin; (B) factor Xa; (C) plasmin; (D) plasma kallikrein. Results of assays with a bacterial lysate instead of rEnSerp1: (E) factor Xa and F, trypsin. Data are expressed as a mean value ± standard deviation.
Figure 2. A in Identification and partial characterization of a novel serpin from Eudiplozoon nipponicum (Monogenea, Polyopisthocotylea)
Figure 2. A phylogram of platyhelminth serpin homologs, Bayesian inference analysis. Values along the branches indicate posterior probabilities and bootstrap values resulting from Bayesian inference and Maximum likelihood analyses, respectively. Proportional lengths of the branches correspond to the expected number of amino acid substitutions per site. The resulting tree is mid-point rooted in order to visualise the clustering of representative subfamilies. Newly obtained Eudiplozoon nipponicum serpin homolog (EnSerp1) is labelled red.
Figure 1 in Characterization of Acetolactate Synthase (ALS)-Inhibitor Resistance in Pennsylvania smartweed (PersicOriO pensylvOnicO)
Figure 1. Dose–response assay using four-parameter log logistic model for (A) bensulfuron-methyl, (B) imazethapyr, and (C) bispyribac-sodium herbicides in Persicaria pensylvanica resistant (R) and susceptible (S) biotypes. Each data point is a mean response of 30 plants (10 plants per replication).
Figure 2 in Characterization of Acetolactate Synthase (ALS)-Inhibitor Resistance in Pennsylvania smartweed (PersicOriO pensylvOnicO)
Figure 2. Two ALS gene mutations conferring ALS-inhibitor resistance in Persicaria pensylvanica. The underlined nucleotides (TCA and TCC) code for the amino acid serine instead of an alanine and proline at two different locations (122 and 197) of the ALS gene. R1, R2, and S refer to two resistant and one susceptible individuals, respectively.
Fig 4 in Morphometrical characterization of the Atlantic mudskipper species (Periophthalmus barbarus) (Linnaeus, 1766) (Perciformes; Gobiiae) from Abonema in Port Harcourt, Rivers State, Nigeria
Fig 4: Scatter plot showing the positions of the measured specimens on a scatter plot. Note the few outliers in the plot.
Fig. 3 in Quantitative Biogeographic Characterization Of Hungary Based On The Distribution Data Of Land Snails (Mollusca,Gastropoda): A Case Of Nestedness Of Species Ranges With Extensive Overlap Of Biotic Elements
Fig. 3. Distribution maps of four biotic elements found by PRABCLUS: (a) highland species, (b) general species, (c) localizes species distributed in the northern and (d) south–eastern parts of Hungary. The different shadings indicate the areas where>70%,>30%, and>0% of the species of an ele-
Fig. 1 in Quantitative Biogeographic Characterization Of Hungary Based On The Distribution Data Of Land Snails (Mollusca,Gastropoda): A Case Of Nestedness Of Species Ranges With Extensive Overlap Of Biotic Elements
Fig. 1. Biogeographic classification of Hungary based on distribution data of land snails according to the (a) hierarchical clustering of the (b) spatial units (ca. 50 km × 50 km). For clustering, the Sørensen–index and Ward–Orlóci fusion method was used. Shades of grey indicate main partitions of the cluster hierarchy, circled numbers 1–6 indicate lower level partitions mentioned in the text, numbers 1–49 identify spatial units (a) in the cluster foot and (b) in the map. Capital letters correspond to IndVal species groups listed in the text and in Appendix, lines associated to letters refer to
Fig. 2 in Quantitative Biogeographic Characterization Of Hungary Based On The Distribution Data Of Land Snails (Mollusca,Gastropoda): A Case Of Nestedness Of Species Ranges With Extensive Overlap Of Biotic Elements
Fig. 2. First two dimensions of the metric multidimensional scaling of the range data of the Hungarian land snail species. 1–4: biotic elements found by PRABCLUS; N: noise component.
Fabrication, Characterization and Evaluation of an Alginate–Lignin Composite for Rare-Earth Elements Recovery
<p>This dataset contains the raw data for the publication "Fabrication, Characterization and Evaluation of an Alginate–Lignin Composite for Rare-Earth Elements Recovery" by Fila et al, published in Materials. The upload includes raw data of physicochemical characterizations of alginate-based composite, i.e. alginate-lignin, including BET, SEM, TG, XPS and XRD analyses. </p>
Figure 4 in Prevalence of Blastocystis sp. in Morocco: Comparative assessment of three diagnostic methods and characterization of parasite forms in Jones' culture medium
Figure 4. Observation under the light microscope (×400) of different forms of cultured Blastocystis sp. in Jones' medium. Panel A: Different sizes of the vacuolar form. Panel B: Granular form (blue arrow) and cystic form (black arrow). Panel C: Granular form (blue arrow) and vacuolar form (red arrow). Panel D: Granular form (black arrow) and vacuolar form (red arrow) stained with methylene blue. Panel E: Illustrates the process of transformation of vacuolar cells into multivacuolar forms in culture, showing the division of the central vacuole into smaller vacuoles. Panel D: Different aspects of the amoeboid form with the presence of a single or several pseudopodia (red arrow).
Figure 5 in Prevalence of Blastocystis sp. in Morocco: Comparative assessment of three diagnostic methods and characterization of parasite forms in Jones' culture medium
Figure 5. Representative gel image of PCR products from Blastocystis isolates. Lanes 1 to 13: Blastocystis isolates; lane NC: negative control; lane PC: positive control; DNA ladder – 50 bp.
Figure 3 in Prevalence of Blastocystis sp. in Morocco: Comparative assessment of three diagnostic methods and characterization of parasite forms in Jones' culture medium
Figure 3. Various forms of Blastocystis sp. were observed under the light microscope during the direct examination of stool specimens. Panel A: Vacuolar form (red arrow) and cyst form (black arrow) of Blastocystis in an unstained wet mount. N: Nuclei situated at the periphery of the organism. C. b: Central body. Panels B, C, and D: Vacuolar form (red arrow), Granular form (blue arrow), and cyst form (black arrow) stained with Lugol's iodine (×400).
Figure 2 in Prevalence of Blastocystis sp. in Morocco: Comparative assessment of three diagnostic methods and characterization of parasite forms in Jones' culture medium
Figure 2. Occurrence of Blastocystis sp. infection on its own or in conjunction with other protozoan species.
Fig. 2 in Phenotypic and Genotypic Characterization ofEimeria caviae from Guinea Pigs (Cavia porcellus)
Fig. 2. Photomicrographs of sporulated oocysts of Eimeria caviae, a coccidium species recovered from Guinea pigs Cavia porcellus: (A, B, D) sub-spherical, (C, D) ellipsoidal, and (D, E, F) ovoidal oocysts. In (D) three shapes can be observed in the same field. The arrowheads point the Stieda and parastieda bodies. Sheather's sugar solution. Scale bar: 10 µm.
Fig. 3 in Phenotypic and Genotypic Characterization ofEimeria caviae from Guinea Pigs (Cavia porcellus)
Fig. 3. Histograms of (A) length, width and (B) shape-index, and (C) linear regression of the oocysts of Eimeria caviae, a coccidium species recovered from Guinea pigs Cavia porcellus.
Fig. 1 in Phenotypic and Genotypic Characterization ofEimeria caviae from Guinea Pigs (Cavia porcellus)
Fig. 1. Line drawings of sporulated oocysts of Eimeria caviae, a coccidium species recovered from Guinea pigs Cavia porcellus: (A) subspherical, (B) ellipsoidal, and (C) ovoidal oocysts; (D–G) variations of the Stieda bodies; (H–K) variations of the parastieda bodies; (L–M) variations of roughness of the oocyst wall. Scale bar: 10 µm.
Fig. 4. A–F in Morphogenesis and Molecular Characterization of a Little Known Soil Ciliate, Oxytricha nauplia Berger et Foissner, 1987 (Ciliophora, Sporadotrichida)
Fig. 4. A–F. Morphogenesis of Oxytricha nauplia after protargol staining. (A, B) Ventral and dorsal views of the same mid-divider, arrowheads in A mark the dorsomarginal kineties anlagen and in B show the posterior fragmentation of the third dorsal kinety anlage (counted from left to right), arrows in B show the old caudal cirri. (C, D) Ventral and dorsal views of the same late divider, (C) shows the completely formed frontoventral-transverse cirri and (D) shows the caudal cirri (arrowheads). (E, F) Ventral and dorsal views of the same late divider just before cell division, to show the newly built ciliature and nuclear apparatus. AZM = adoral zone of membranelles; DK1, 2, 3, 4, 5 = dorsal kinety 1, 2, 3, 4, 5; LMC = left marginal cirri; TC = transverse cirri; I to VI represent anlagen I to VI. Scale bars = 30 μm.
Fig. 7 in Morphogenesis and Molecular Characterization of a Little Known Soil Ciliate, Oxytricha nauplia Berger et Foissner, 1987 (Ciliophora, Sporadotrichida)
Fig. 7. Drawings (A–C) and photomicrographs (D–G) of original population of Oxytricha nauplia after protargol staining. (A) Ventral ciliature (redrawing from the holotype). (B, C) Ventral (B) and dorsal (C) views of the holotype from Berger (1999), arrowhead shows a misinterpreted frontoventral cirrus. (D) Ventral ciliature of the holotype. (E) Magnification of frontoventral cirri of the holotype. (F) Ventral view of the anterior portion of a paratype, to show the arrangement of frontoventral cirri. (G) Dorsal view of the right portion of another paratype, to show dorsal kineties 5 and 6.
Fig. 3. A–G in Morphogenesis and Molecular Characterization of a Little Known Soil Ciliate, Oxytricha nauplia Berger et Foissner, 1987 (Ciliophora, Sporadotrichida)
Fig. 3. A–G. Morphogenesis of Oxytricha nauplia after protargol staining. (A) A section of ventral side of an early divider to show the three parts of oral primordium (arrowheads). (B) Ventral view of an early divider to show that basal bodies in oral primordium start mixing together (arrowhead) and a little group of basal bodies formed de novo at the right of postoral ventral cirrus V/4 (arrow). (C) Ventral view of an early divider to show the cirrus IV/2 is disorganized and the basal bodies at the right of postoral ventral cirrus V/4 are proliferated into a larger region (arrowhead). (D, E) Ventral and dorsal views of the same specimen, arrows in D show the frontoventral-transverse cirral anlage arisen, arrowheads show that the right marginal anlage of the opisthe and proter, and hollow arrow depicts the newly formed membranelles; arrowheads in E show dorsal kineties anlagen. (F, G) Ventral and dorsal views of the same specimen, showing the 6 streaks of frontoventral-transverse cirral anlage, arrowheads show the left marginal anlage of the opisthe and proter. DK, dorsal kinety; I to VI represent anlagen I to VI. Scale bars = 30 μm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.