Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
669
datasets available to search
ShareScore release 0.9.0
Dataset results
669 results for “comparative genomics”
Human SUP-B15 cells: CNV compared to reference genome.
GEO Series GSE239416. Homo sapiens. 1 samples. Type: Genome variation profiling by array; Genome variation profiling by SNP array.
Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics
GEO Series GSE61343. Pan troglodytes; Homo sapiens. 65 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by array; Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis.
Comparative Genome Analysis of Programmed DNA Elimination in Nematodes (Ascaris)
GEO Series GSE99523. Ascaris suum. 12 samples. Type: Expression profiling by high throughput sequencing.
Comparative genomics and transcriptomics of Escherichia coli isolates carrying virulence factors of both enteropathogenic and enterotoxigenic Escherichia coli H10407
GEO Series GSE86635. Escherichia coli ETEC H10407. 8 samples. Type: Expression profiling by high throughput sequencing.
Comparative chemical-genomic profiling of plant-based hydrolysate toxins enables predictive assessment of responses to complex mixtures
GEO Series GSE186866. Saccharomyces cerevisiae. 151 samples. Type: Other.
Genomic profiling of gastric carcinoma in situ and gastric adenomas by array-based comparative genomic hybridization
GEO Series GSE19575. Homo sapiens. 40 samples. Type: Genome variation profiling by genome tiling array.
Comparative cistromics reveals genomic crosstalk between FOXA1 and ERα in tamoxifen-associated endometrial carcinomas
GEO Series GSE81213. Homo sapiens. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic profiling of IPMN with an associated invasive carcinomas (IPMN-inv) and invasive ductal carcinomas (IDC) by array-based comparative genomic hybridization
GEO Series GSE65181. Homo sapiens. 39 samples. Type: Genome variation profiling by array.
High-resolution map of copy number variations in motor cortex of Control and Sporadic Amyotrphic Lateral Sclerosis patients by using a customized exon-centric comparative genomic hybridization array.
GEO Series GSE107375. Homo sapiens. 40 samples. Type: Genome variation profiling by array.
Comparative functional genomics of adaptation to muscular disuse in hibernating mammals (Arctic ground squirrels)
GEO Series GSE62377. Urocitellus parryii. 19 samples. Type: Expression profiling by array.
Figure 1 from: Wu Y-A, Gao J-W, Cheng X-F, Xie M, Yuan X-P, Liu D, Song R (2020) Characterization and comparative analysis of the complete mitochondrial genome of Azygia hwangtsiyui Tsin, 1933 (Digenea), the first for a member of the family Azygiidae. ZooKeys 945: 1-16. https://doi.org/10.3897/zookeys.945.49681
Figure 1 An annular diagram of the Azygia hwangtsiyui mitochondrial genome.
Figure 5 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 5 The phylogenetic tree based on 37 mitochondrial genes. (A) ML tree; (B) BI tree.
Figure 2 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 2 The relative synonymous codon frequencies from the four species.
Figure 4 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 4 The main repeat elements in A+T-rich regions from four species.
Figure 1 from: Zhongying Q, Huihui C, Hao Y, Yuan H, Huimeng L, Xia L, Xingchun G (2020) Comparative mitochondrial genomes of four species of Sinopodisma and phylogenetic implications (Orthoptera, Melanoplinae). ZooKeys 969: 23-42. https://doi.org/10.3897/zookeys.969.49278
Figure 1 Circular map of the mitogenome from four species.
Comparative genomics reveals sanitary and catabolic capabilities of Actinobacteria within the fungus-farming termite symbiosis
<p>Fasta assembly and annotated genbank files of 4 putative novel Actinobacteria isolated from the fungus farming termite <em>Macrotermes natalensis:</em></p> <p> </p> <p><strong>Sample - Genus - Isolation location on termite</strong><br> RB22 - Luteimicrobium - major worker gut</p> <p>RB24 - Mycolicibacterium - major worker gut</p> <p>RB33 - Mycolicibacterium - major worker gut</p> <p>M32 - Streptomyces - cuticle</p> <p> </p> <p> </p>
Comparative genomics of different lifestyle fungi in Helotiales (Leotiomycetes) reveals temperature and ecosystem adaptations
<p>Paper "<span>Comparative genomics of different lifestyle fungi in Helotiales (Leotiomycetes) reveals temperature and ecosystem adaptations</span>". Supplementary files</p>
Figure 3 from: Zhang Q-H, Huang P, Chen B, Li T-J (2018) The complete mitochondrial genome of Orancistrocerus aterrimus aterrimus and comparative analysis in the family Vespidae (Hymenoptera, Vespidae, Eumeninae). ZooKeys 790: 127-144. https://doi.org/10.3897/zookeys.790.25356
Figure 3 Nucleotide composition of all 13 PCGs of eleven species of Vespidae.
Fig. 1 in Comparative analyses of the fragmented mitochondrial genomes of wild pig louse Haematopinus apri from China and Japan
Fig. 1. Female and male Haematopinus apri from China.
Dataset - Comparative Genomics of Firmicutes reveals probable adaptations for xylose fermentation in Thermoanaerobacterium saccharolyticum
<p>Files partaining to a comparative genomics analysis of the firmicutes clade, focusing on <em>Thermoanaerobacterium saccharolyticum</em></p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.