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Dataset results

492 results for “sequence modeling”

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geo16/100

Integrative Analysis of Tamoxifen-resistant Cell Line Models Based on Sequencing Genomes, Transcriptomes and Epigenomes

GEO Series GSE55383. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Genome variation profiling by array.

openGEO-OpenJun 2018View details →
geo16/100

Whole-exome sequencing analysis of primary tumors and metastases from the NPK (Nkx3.1CreERT2/+; Ptenflox/flox; KrasLSL-G12D/+; R26R-CAG-LSL-EYFP/+) prostate cancer mouse model

GEO Series GSE143814. Mus musculus. 21 samples. Type: Genome variation profiling by high throughput sequencing.

openGEO-OpenAug 2020View details →
geo16/100

Dynamical network biomarker analysis using multi-organ RNA sequencing in metabolic syndrome model mice

GEO Series GSE305719. Mus musculus. 1104 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo16/100

Corpus callosum bulk RNA sequencing of a cuprizone mouse model of demyelination

GEO Series GSE281180. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2024View details →
geo16/100

Cortical single-cell RNA sequencing of the microglia specific TREM2 inducible mouse models

GEO Series GSE161230. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2020View details →
geo16/100

Genome-wide mining for microRNAs and their targets in a pre-model tree for Betula luminifera using high-throughput sequencing and degradome analyses

GEO Series GSE80074. Betula luminifera. 2 samples. Type: Non-coding RNA profiling by high throughput sequencing; Other.

openGEO-OpenApr 2019View details →
geo16/100

Next generation gene sequencing facilitates transcriptome analysis of liver tissue in dexmedetomidine-treated liver resection model mice

GEO Series GSE188867. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo16/100

GTO sequencing of Mouse Tumors In KPC transplantation model [mouse GTO-seq]

GEO Series GSE128793. Mus musculus. 426 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenMar 2020View details →
geo16/100

Single-Cell RNA Sequencing Reveals Metabolic Stress-Dependent Activation of Cardiac Macrophages in a Model of Dyslipidemia-Induced Diastolic Dysfunction

GEO Series GSE209549. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2023View details →
geo16/100

Low-input unstranded RNA sequencing on bulk tumor or FACS isolated tumor cells from known rhabdomyosarcoma models [Low-input_BulkRNAseq]

GEO Series GSE231917. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo16/100

Next-gen sequencing for transcriptomic differences in HuH-7 human hepatocellular carcinoma cell line models of hepatotoxicity

GEO Series GSE76139. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2019View details →
geo16/100

mRNA sequencing of circCpsf6 silencing models in N2A cells

GEO Series GSE164028. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2021View details →
geo16/100

S100A8/A9-related myocardial injury after non-cardiac surgery: RNA sequencing analysis in a novel mouse model

GEO Series GSE296854. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo16/100

Transcriptome Sequencing of Optic Nerve in a Rat Model of Neuromyelitis Optica Spectrum Disorder-Related Optic Neuritis (NMOSD-ON)

GEO Series GSE292730. Rattus norvegicus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2025View details →
geo16/100

Single-nucleus RNA sequencing of the hippocampal formation from a genetically diverse Alzheimer's disease mouse model (AD-BXDs)

GEO Series GSE221959. Mus musculus. 53 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →
geo16/100

Next generation sequencing to reveal the transcriptome of a DUX4 inducible FSHD model

GEO Series GSE154649. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2020View details →
geo16/100

RNA sequencing identifies key differences in patient derived xenograft models of primary and metastatic pediatric neuroendocrine tumors

GEO Series GSE201505. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo16/100

RNA sequencing of organoids isolated from pancreatic cancer mouse model KRASG12D; p53R172H; Ptf1a-Cre.

GEO Series GSE93279. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2017View details →
geo16/100

Integrative Analysis of Tamoxifen-resistant Cell Line Models Based on Sequencing Genomes, Transcriptomes and Epigenomes [seq]

GEO Series GSE55343. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.

openGEO-OpenJun 2018View details →
geo16/100

Single cell RNA sequencing CD45+ tumor-infiltrating lymphocytes (TILs) samples from glioma mouse model treated with PBS or ibudilast.

GEO Series GSE205198. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record