Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

8,071

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

8,071 results for “transcriptome analysis”

Learn how ShareScore rates datasets ↗
geo24/100

Transcriptomic analysis of bolting tolerance in six sugar beet genotypes

GEO Series GSE55951. Beta vulgaris. 6 samples. Type: Expression profiling by array.

openGEO-OpenDec 2014View details →
geo24/100

Transcriptomic analysis of the effects of CDK8 and CDK19 knockout and re-expression and selective CDK8/19 kinase inhibitor Senexin B treatment on gene expression in HEK293 cells

GEO Series GSE154357. Homo sapiens. 78 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2022View details →
geo24/100

Identification of novel prognostic biomarkers for thyroid cancer by integrated transcriptome analysis of metastasis-associated genes

GEO Series GSE284225. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2024View details →
geo24/100

Transcriptome analysis of vascular smooth muscle cells from mice deficient for chaperone-mediated autophagy

GEO Series GSE143162. Mus musculus. 4 samples. Type: Expression profiling by array.

openGEO-OpenMar 2022View details →
geo24/100

Genome-wide association study and transcriptome analysis of the white/red earlobe color in Qingyuan Partridge chicken

GEO Series GSE101622. Gallus gallus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2018View details →
geo24/100

Comparative transcriptome analysis between resistant and susceptible tomato lines uncovers the response mechanism of Cf-16-mediated resistance to Cladosporium fulvum

GEO Series GSE133678. Solanum lycopersicum. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Whole genome transcriptome analysis (RNAseq) identifies genes upregulated during ciliogenesis in Chlamydomonas reinhardtii

GEO Series GSE43004. Chlamydomonas reinhardtii. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2013View details →
geo24/100

Single cell Transcriptomic analysis of CD8+ T cells treated with anti-CD137 agonists within VK12653 Multiple Myeloma bone marrow microenvironment .

GEO Series GSE205702. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →
geo24/100

Single cell transcriptome analysis of human oocyte aging

GEO Series GSE155179. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

Transcriptome differences analysis between Yersinia pestis 201 wild strain and fyuA mutant strain

GEO Series GSE198937. Yersinia pestis. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2022View details →
geo24/100

Transcriptomic analysis reveals that Rho GTPases regulate trap development and lifestyle transition of the nematode-trapping fungus Arthrobotrys oligospora

GEO Series GSE192443. Orbilia oligospora. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2021View details →
geo24/100

Transcriptome analysis of primary monocytes from HIV+ patients with differential responses to therapy

GEO Series GSE52900. Homo sapiens. 14 samples. Type: Expression profiling by array.

openGEO-OpenDec 2013View details →
geo24/100

Transcriptome analysis of Suaeda salsa under salt stress

GEO Series GSE145366. Suaeda salsa. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2020View details →
geo24/100

Transcriptome analysis of Streptococcus gallolyticus subsp. gallolyticus in interaction with THP-1 macrophages [UCN 34 0h]

GEO Series GSE96861. Streptococcus gallolyticus subsp. gallolyticus. 6 samples. Type: Expression profiling by array.

openGEO-OpenMar 2017View details →
geo24/100

Transcriptome analysis by RNA sequencing of human trisomy 21 and normal control blood cells

GEO Series GSE151282. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo24/100

Transcriptome analysis to compare control and Ahed-deficient hematopoietic stem and progenitor cells (HSPC) and erythroblasts [RNA-Seq]

GEO Series GSE218517. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Transcriptomic analysis of ovarian cancer cells after drug administration and tRNA transfection at 10 and 24 hours

GEO Series GSE303192. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

Transcriptome analysis of cytotrophoblasts and syncytiotrophoblasts derived from trophoblast stem cells, mock-infected or infected with Toxoplasma gondii

GEO Series GSE263615. Toxoplasma gondii; Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Transcriptome and epigenome data analysis to reveal the key role of KAKU4 during leaf senescence in Arabidopsis

GEO Series GSE250299. Arabidopsis thaliana. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenFeb 2024View details →
geo24/100

Transcriptome analysis of Wnt knockdown embryos reveals candidate canonical Wnt/β-catenin target genes during Xenopus laevis gastrulation

GEO Series GSE77364. Xenopus laevis. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2016View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record