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894
datasets available to search
ShareScore release 0.9.0
Dataset results
894 results for “Single-cell RNA-seq”
Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets [10X]
GEO Series GSE142465. Mus musculus; Homo sapiens. 35 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis of rat molars reveals cell-identity and driver genes associated with dental mesenchymal cell differentiation
GEO Series GSE217465. Rattus norvegicus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of astrocytes and neurons from primary culture of the mouse brain and of acute slice of interneurons from Patch-clamp pipette [RNA-seq mouse brain]
GEO Series GSE231725. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of rice root tips [bulk RNA-seq]
GEO Series GSE146033. Oryza sativa. 4 samples. Type: Expression profiling by high throughput sequencing.
Oct1 cooperates with Smad transcription factors to promote mesodermal lineage specification [single-cell RNA-seq]
GEO Series GSE160942. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Exon Deletion Profiling Reveals Splicing Events That Shape Gene Expression and Cell State Dynamics [RNA-seq_BaseEditor]
GEO Series GSE292986. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq of blood cells between an irradiated patient and non-irradiated healthy men
GEO Series GSE166902. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies
GEO Series GSE70245. Mus musculus. 680 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
An Improved Bacterial Single-cell RNA-seq Reveals Biofilm Heterogeneity [scRNA-seq]
GEO Series GSE260457. Staphylococcus aureus; Escherichia coli str. K-12 substr. MG1655; Caulobacter vibrioides NA1000. 19 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing identifies Endothelial derived HBEGF promoting Pancreatic Beta Cell Proliferation via EGFR-Kmt5a-H4K20me Pathway [bulk RNA-seq]
GEO Series GSE278861. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Effective methods for bulk RNA-seq deconvolution using scnRNA-seq transcriptomes [AML single-cell]
GEO Series GSE220651. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of peripheral blood mononuclear cells from kidney-transplant recipients with stable renal function versus graft dysfunction
GEO Series GSE298312. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2 [single-cell RNA-seq]
GEO Series GSE197858. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of endothelial and pericyte populations in the mouse cochlear stria vascularis
GEO Series GSE312224. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
BCL11B enhancer hijacking defines a subtype of lineage ambiguous stem cell leukemia [single-cell RNA-seq]
GEO Series GSE173320. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis reveals reduction of B cells in the bone marrow promote fracture healing
GEO Series GSE142786. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq of cisplatin-treated adult stria vascularis identifies cell type-specific regulatory networks and novel therapeutic gene targets
GEO Series GSE165662. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Interleukin-17 governs hypoxic adaptation of injured epithelium [CITE-seq & single-cell RNA-seq]
GEO Series GSE166949. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-Seq reveals a highly coordinated transcriptional program in mouse oocytes during follicular formation
GEO Series GSE152407. Mus musculus. 146 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA-Seq Reveals Adventitial Fibroblast Alterations during Mouse Atherosclerosis
GEO Series GSE289281. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.