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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
DNA methylation memory of acinar-ductal transition state altering Kras-downstream Pi3k and Rho GTPase signaling [spatial transcriptomics]
GEO Series GSE249121. Mus musculus. 20 samples. Type: Other.
Single-nucleus and spatial transcriptomics of human ovary: Molecular insights into signaling pathways underlying primary ovarian insufficiency in classic galactosemia [Spatial transcriptomics]
GEO Series GSE268523. Homo sapiens. 6 samples. Type: Other.
Single-nucleus Ribonucleic Acid-sequencing and Spatial Transcriptomics Reveal the Cardioprotection of Shexiang Baoxin Pill (MUSKARDIA) in Mice with Myocardial Ischemia-Reperfusion Injury
GEO Series GSE227238. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Tlr7 Drives Sex Differences in Age- and AD-related Demyelination [spatial transcriptomics]
GEO Series GSE282330. Mus musculus. 11 samples. Type: Other.
Spatial transcriptome analysis defines heme as a hemopexin-targetable inflammatoxin in the brain
GEO Series GSE182127. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Hippocampal Subregion Transcriptomic Profiles Associated with Age-Related Changes in Spatial Pattern Separation
GEO Series GSE140420. Rattus norvegicus. 84 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics reveals the cellular neighborhood of erythropoietin-producing cells in the mouse kidney
GEO Series GSE308511. Mus musculus. 12 samples. Type: Other.
Spatial transcriptomics profile at single cell level of murine glioblastomas treated with and without anti-CSF-1R inhibitors.
GEO Series GSE266969. Mus musculus. 13 samples. Type: Other.
Spatially resolved single-cell analysis uncovers protein kinase Cδ-expressing microglia with anti-tumor activity in glioblastoma [Spatial Transcriptomics]
GEO Series GSE298689. Mus musculus. 1 samples. Type: Other.
Transcriptomic profiling of shed cells enables spatial mapping of cellular turnover in human organs
GEO Series GSE301268. Homo sapiens. 31 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics and single-nucleus RNA-sequencing reveal a transcriptomic atlas of human spinal cord
GEO Series GSE243077. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing; Other.
Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues - scRNA-seq Data
GEO Series GSE308145. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics - scRNAseq v3 with cell multiplexing
GEO Series GSE260800. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell RNA Sequencing and Spatial Transcriptomics Reveal Unique Subpopulations of Infiltrating Macrophages and Dendritic Cells Following AKI
GEO Series GSE289933. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing; Other.
Integrated Methylation and Spatial Transcriptomic Profiling of Metaplastic Breast Cancer to Investigate Intra-tumoral Heterogeneity.
GEO Series GSE283412. Homo sapiens. 8 samples. Type: Other.
Integration of spatial and single cell transcriptomics localizes epithelial-immune cross-talk in kidney injury
GEO Series GSE171406. Homo sapiens; Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Role of copper in progression of clear cell renal cell carcinoma [Spatial transcriptomics]
GEO Series GSE250163. Homo sapiens. 5 samples. Type: Other.
Spatial transcriptomics reveals a conserved segment polarity program that governs muscle patterning in Nematostella vectensis
GEO Series GSE173786. Nematostella vectensis. 31 samples. Type: Expression profiling by high throughput sequencing.
Study on the Effects of Retinoids on UVR-Induced Skin Photoaging [Spatial Transcriptomics]
GEO Series GSE294120. Mus musculus. 2 samples. Type: Other.
Spatial transcriptomics unveils estrogen-modulated immune responses and structural alterations in the ectocervical mucosa of depot medroxyprogesterone acetate users
GEO Series GSE299708. Homo sapiens. 8 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.