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699
datasets available to search
ShareScore release 0.9.0
Dataset results
699 results for “biofilm.”
Comparative gene expression analysis of planktonic Porphyromonas gingivalis ATCC 33277 in the presence of a growing biofilm versus planktonic cells
GEO Series GSE122623. Porphyromonas gingivalis; Porphyromonas gingivalis ATCC 33277. 6 samples. Type: Expression profiling by array.
Insights into the stress response of Escherichia coli biofilms upon Plasma-activated water treatment.
GEO Series GSE264631. Escherichia coli. 16 samples. Type: Expression profiling by high throughput sequencing.
A three-colour biosensor reveals multimodal stress response at the single cell level and the spatiotemporal dynamics of biofilms.
GEO Series GSE211360. Escherichia coli str. K-12 substr. MG1655. 10 samples. Type: Expression profiling by high throughput sequencing.
Characterization of Staphylococcus epidermidis biofilm-released cells (BRC) transcriptome upon interaction with whole human blood and its cellular and soluble components
GEO Series GSE79948. Staphylococcus epidermidis. 6 samples. Type: Expression profiling by high throughput sequencing.
SaeRS-dependent inhibition of biofilm formation in Staphylococcus aureus Newman
GEO Series GSE65827. Staphylococcus aureus. 10 samples. Type: Expression profiling by high throughput sequencing.
A five-species transcriptome array for oral mixed-biofilm studies
GEO Series GSE28841. Streptococcus mutans UA159; Porphyromonas gingivalis W83; Streptococcus mitis; Streptococcus sanguinis SK36; Fusobacterium nucleatum; Aggregatibacter actinomycetemcomitans HK1651. 12 samples. Type: Expression profiling by array.
Biofilm Formation and Virulence of Shigella flexneri is Modulated by pH
GEO Series GSE183515. Shigella flexneri. 6 samples. Type: Expression profiling by high throughput sequencing.
Regulation of the biofilm-specific genes circuitry in Candida albicans by a novel histone H3 variant
GEO Series GSE72824. Candida albicans. 8 samples. Type: Expression profiling by array.
Comparative gene expression analysis of Porphyromonas gingivalis ATCC 33277 in planktonic and biofilm states
GEO Series GSE96756. Porphyromonas gingivalis. 6 samples. Type: Expression profiling by array.
CD4+ T cell-innate immune crosstalk is critical during Staphylococcus aureus biofilm infection [CD3+ scRNA-seq]
GEO Series GSE264736. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Pseudomonas aeruginosa Activates Quorum Sensing, Antioxidant Enzymes and Type VI Secretion in Response to Oxidative Stress to Initiate Biofilm Formation and Wound Chronicity
GEO Series GSE267862. Pseudomonas aeruginosa. 18 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic regulation of acidic biofilms by Candida albicans Sfl1
GEO Series GSE206208. Candida albicans. 6 samples. Type: Expression profiling by array.
Global transcriptional analysis of Geobacter sulfurreducens gsu1771-mutant in response to biofilm development in different supports
GEO Series GSE223184. Geobacter sulfurreducens. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of bacterial vaginosis-associated bacteria living in single or multispecies biofilms
GEO Series GSE268115. Prevotella bivia; Fannyhessea vaginae; Gardnerella vaginalis. 12 samples. Type: Expression profiling by high throughput sequencing.
Determination of fluoroquinolones concentration among biofilm-forming and non-forming uropathogenic Acinetobacter Calcoaceticus-Baumannii complex and their correlation to fluoroquinolone-resistant genes
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Data from: Biofilm-associated multidrug-resistant and methicillin-resistant staphylococcus aureus infections in children
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Data from: Top-down effects of a lytic bacteriophage and protozoa on bacteria in aqueous and biofilm phases
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Transcriptomic study of Salmonella enterica subspecies enterica serovar Typhi biofilm
GEO Series GSE93686. Salmonella enterica subsp. enterica serovar Typhi. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome of S. acidocaldarius MW001 strain grown as biofilm or planktonic cells and transcriptomic profile of an RNaseR-treated S. acidocaldarius MW001 small RNA sample
GEO Series GSE99484. Sulfolobus acidocaldarius. 3 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Vibrio vulnificus Wild-type vs. smcR mutant biofilm cells (V. vulnificus quorum sensing master regulator)
GEO Series GSE32270. Vibrio vulnificus. 3 samples. Type: Expression profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.