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485
datasets available to search
ShareScore release 0.9.0
Dataset results
485 results for “pathway analysis”
Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway towards SARS-CoV-2 (CUT & Run)
GEO Series GSE244483. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Gene community-regulated pathway analysis successfully deciphers pathogenesis and biomarkers of viral versus metabolic hepatocellular carcinoma
GEO Series GSE272035. Homo sapiens. 71 samples. Type: Expression profiling by high throughput sequencing.
Convergent Pathways in Idiopathic Autism Revealed by Time Course Transcriptomic Analysis of Patient-Derived Neurons
GEO Series GSE124308. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
RNA sequencing and pathway analysis identify important pathways involved in hypertrichosis and intellectual disability in patients with Wiedemann-Steiner syndrome
GEO Series GSE115969. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Dissecting Stages of the Notch signaling pathway during Kidney Development by Oligonucleotide Array Sequence Analysis
GEO Series GSE28496. Mus musculus. 12 samples. Type: Expression profiling by array.
RNA-seq analysis revealed novel genes and signaling pathway associated with disease resistance to avian influenza virus infection in chickens
GEO Series GSE57616. Gallus gallus. 4 samples. Type: Expression profiling by high throughput sequencing.
Microarray analysis of molecular pathways and candidate genes between dorsal and leg Skin in Chicken
GEO Series GSE130293. Gallus gallus. 8 samples. Type: Expression profiling by array.
Pathway analysis of RNA sequencing of various stages of myodifferentiation identifies conditions favoring type I and type II fibers, and highlights increased efficiency of combined differentiation
GEO Series GSE108503. Mus musculus. 14 samples. Type: Expression profiling by high throughput sequencing.
Integrating transcriptome, proteome, and phosphoproteome analysis reveals loss function of IQGAP2 promotes cell proliferation through the mTOR pathway
GEO Series GSE213715. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Multi-omics analysis of green lineage osmotic stress pathways unveils crucial roles of different cellular compartments
GEO Series GSE260814. Chlamydomonas reinhardtii. 45 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway towards SARS-CoV-2 (RNA-Seq depeted total)
GEO Series GSE244485. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
SnRNA Transcriptome analysis reveals key miRNAs and pathways on adipocytes
GEO Series GSE210021. Mus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Data of "Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations"
<p>This dataset contains the numerical data used for the analysis described in the paper "<strong><span>Fully automated pipeline for the fiber tractography of the anterior optic pathway in patients with sellar and parasellar tumors and analysis of the microstructural alterations</span></strong>", Gramegna LL et al.</p> <p>chiasma_displacement.xlsx contains the value in mm of the vertical displacement of the chiasm for each subject (see the paper for the methodological procedure of the evaluation).</p> <p>parameters_along_tract.xlsx contains for each subject (Exam): the condition (Cond, 0=healthy control, 1=patient), whether they experienced complete or partial resolution of symptoms after surgical treatment (Responder), the corresponding area along the anterior optic pathway (Zone), the sampling point among the 45 that the anterior optic pathway was divided into (Bin), the microstructural parameter considered (Measure) and its corresponding value (Value).</p>
Single-cell transcriptome-based analysis reveals hub genes and key pathways in acute B-lymphoblastic leukemia
<p><span>急性</span><span>B </span><span>淋巴细胞白血病(</span><span>Acute B Lymphoblastic Leukemia B-ALL</span><span>)发病机制复杂,与基因突变和信号通路的异常密切相关。本研究旨在对</span><span>B-ALL</span><span>患者的基因表达和信号通路进行系统分析,我们期望揭示疾病发生和发展的分子机理,为临床治疗提供新的靶点。</span><span>在</span><span>GSE130116</span><span>数据集中,通过使用特定标记基因鉴定</span><span>B</span><span>细胞亚型。应用高维加权基因共表达网络分析(</span><span>high-definition Weighted Gene Co-expression Network Analysis hdWGCNA</span><span>)对单细胞</span><span><span>RNA</span></span><span><span>测序(</span><span>single-cell RNA sequencing</span><span> <span> </span>scRNA-seq</span></span><span><span>)</span></span><span>数据进行细胞亚群聚类和基因模块关联,结合伪时间轨迹分析,以确定与</span><span>B-ALL</span><span>相关的关键细胞状态和基因模块。基因组富集分析识别与基因模块相关的生物过程。使用用于活性推断的通路响应基因(</span><span>Pathway RespOnsive GENes for activity inference PROGENy</span><span>)软件包用于基于单细胞转录组数据推断通路活性。分析伪时序变化中的关键基因,并用</span><span>FindMarkers</span><span>函数进行差异表达分析,识别不同伪时间状态中显著变化的基因。</span></p>
Gene expression analysis of lymphoblast cells in patients with genetic defects in comparison with normal control samples: Profile and characterization of gene pathway expression
GEO Series GSE53756. Homo sapiens. 10 samples. Type: Expression profiling by array.
Transcriptome analysis revealed key genes and pathways of nitrate in the prevention of hypoxia-induced small intestinal epithelial injury
GEO Series GSE252373. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis and characterization of differential pathways of hMSCs in response to BiFP containing integrin or DDR2 binding motifs creates signals
GEO Series GSE249677. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Integrative investigation on breast cancer in ER, PR and HER2-defined subgroups using mRNA and miRNA expression profiling and cancer core pathway analysis
GEO Series GSE43040. Homo sapiens. 115 samples. Type: Non-coding RNA profiling by array.
Systems analysis of interaction between p38/MAPK pathway and SARS-CoV-2
GEO Series GSE183999. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Differential expression analysis connects knock-downs of eIF3e and eIF3d with the MAP kinase signaling pathway
GEO Series GSE216967. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.