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445 results for “taxonomic classification”
Fig. 92 in Classification, Natural History, and Evolution of the Subfamily Peloniinae O (Coleoptera: Cleroidea: Cleridae). Part IX. Taxonomic revision of the New World genus Muisca S
Fig. 92: Proposed phylogeny of Muisca species groups.
Figs 84-85 in Classification, Natural History, and Evolution of the Subfamily Peloniinae O (Coleoptera: Cleroidea: Cleridae). Part IX. Taxonomic revision of the New World genus Muisca S
Figs 84-85: Various organs. (84) M. octonotata, antenna. (85) M. octonotata, elytra.
Figs 80-81 in Classification, Natural History, and Evolution of the Subfamily Peloniinae O (Coleoptera: Cleroidea: Cleridae). Part IX. Taxonomic revision of the New World genus Muisca S
Figs 80-81: Various organs. (80) M. octonotata, head. (81) M. octonotata, mouthparts.
Uniprot datasets with variable patch sizes for testing taxonomic classification
<p>These datasets can be used to test the performance of the taxonomic classification model deposited at <a href="https://zenodo.org/record/4306499">https://zenodo.org/record/4306499</a> and trained using the data deposited at <a href="https://zenodo.org/record/4306240">https://zenodo.org/record/4306240</a> with different patch sizes:</p> <ul> <li>300 +- 10 bases</li> <li>300 +- 25 bases</li> <li>300 +- 50 bases</li> </ul> <p>Those are the same sequences as used in the test dataset mentioned above, but sampled at different lengths.</p>
Figure 70 from: Shpeley D, Hunting W, Ball GE (2017) A taxonomic review of the Selenophori group (Coleoptera, Carabidae, Harpalini) in the West Indies, with descriptions of new species and notes about classification and biogeography. ZooKeys 690: 1-195. https://doi.org/10.3897/zookeys.690.13751
Figure 70 - Map of West Indies showing known localities for species of Discoderus LeConte, in part.
Figure 8 from: Shpeley D, Hunting W, Ball GE (2017) A taxonomic review of the Selenophori group (Coleoptera, Carabidae, Harpalini) in the West Indies, with descriptions of new species and notes about classification and biogeography. ZooKeys 690: 1-195. https://doi.org/10.3897/zookeys.690.13751
Figure 8 - Map of West Indies showing known localities for species of Amblygnathus Dejean.
Figure 65 from: Shpeley D, Hunting W, Ball GE (2017) A taxonomic review of the Selenophori group (Coleoptera, Carabidae, Harpalini) in the West Indies, with descriptions of new species and notes about classification and biogeography. ZooKeys 690: 1-195. https://doi.org/10.3897/zookeys.690.13751
Figure 65 - Map of West Indies showing known localities for species of Stenomorphus Dejean.
Figure 71 from: Shpeley D, Hunting W, Ball GE (2017) A taxonomic review of the Selenophori group (Coleoptera, Carabidae, Harpalini) in the West Indies, with descriptions of new species and notes about classification and biogeography. ZooKeys 690: 1-195. https://doi.org/10.3897/zookeys.690.13751
Figure 71 - Map of West Indies showing known localities for species of Discoderus LeConte, in part.
Figure 13 from: Shpeley D, Hunting W, Ball GE (2017) A taxonomic review of the Selenophori group (Coleoptera, Carabidae, Harpalini) in the West Indies, with descriptions of new species and notes about classification and biogeography. ZooKeys 690: 1-195. https://doi.org/10.3897/zookeys.690.13751
Figure 13 - Map of West Indies showing known localities for species of Neodiachipteryx Noonan.
Figure 19 from: Liebherr JK (2018) Cladistic classification of Mecyclothorax Sharp (Coleoptera, Carabidae, Moriomorphini) and taxonomic revision of the New Caledonian subgenus Phacothorax Jeannel. Deutsche Entomologische Zeitschrift 65(1): 1-63. https://doi.org/10.3897/dez.65.21000
Figure 19 Geographical distributions of Mecyclothorax (Phacothorax) spp.
Figure 14 from: Liebherr JK (2018) Cladistic classification of Mecyclothorax Sharp (Coleoptera, Carabidae, Moriomorphini) and taxonomic revision of the New Caledonian subgenus Phacothorax Jeannel. Deutsche Entomologische Zeitschrift 65(1): 1-63. https://doi.org/10.3897/dez.65.21000
Figure 14 Geographical distributions of Mecyclothorax (Phacothorax) spp.
Diamond formatted protein database for taxonomic classification
<p>This is a diamond formatted database (diamond version 0.9.22) built on December 14th 2018.</p> <p>The database contains a total of 17,694,143 sequences:</p> <ul> <li>2,708,401 protein sequences from the <a href="https://bitbucket.org/dbeisser/taxmapper_supplement/src/master/">taxmapper database</a> (commit 450d337), containing 121 unique taxa.</li> <li>14,976,193 protein sequences from 1055 unique fungal taxa (downloaded from <a href="https://genome.jgi.doe.gov/1000_fungi_project">JGI 1000 fungi project</a> on November 23 2018).</li> <li>9,549 protein sequences from the <em>Hygrophorus russula</em> genome obtained from Genbank (accession GCA_003314125.1) on November 28 2018.</li> </ul> <p>The <em>Hygrophorus russula</em> protein sequences were obtained by running Augustus (v. 3.2.3) gene caller on the genomic fasta file using the laccaria_bicolor gene model.</p> <p>Taxonomic information was built into the diamond database by running:</p> <pre><code class="language-bash">zcat fasta.gz | diamond makedb -d diamond -p 4 --taxonmap taxonmap.gz --taxonnodes nodes.dmp</code></pre> <p>The nodes.dmp file was obtained from the <a>taxdump.tar.gz</a> file on December 11 2018.</p>
Figure 19 from: Liebherr JK (2018) Cladistic classification of Mecyclothorax Sharp (Coleoptera, Carabidae, Moriomorphini) and taxonomic revision of the New Caledonian subgenus Phacothorax Jeannel. Deutsche Entomologische Zeitschrift 65(1): 1-63. https://doi.org/10.3897/dez.65.21000
Figure 19 - Geographical distributions of Mecyclothorax (Phacothorax) spp.
Figure 14 from: Liebherr JK (2018) Cladistic classification of Mecyclothorax Sharp (Coleoptera, Carabidae, Moriomorphini) and taxonomic revision of the New Caledonian subgenus Phacothorax Jeannel. Deutsche Entomologische Zeitschrift 65(1): 1-63. https://doi.org/10.3897/dez.65.21000
Figure 14 - Geographical distributions of Mecyclothorax (Phacothorax) spp.
FIGURE 19. Female genitalia. a, b, d, e in Revised classification of the New World Cylapini (Heteroptera: Miridae: Cylapinae): taxonomic review of the genera Cylapinus, Cylapoides and Peltidocylapus and a morphology-based phylogenetic analysis of tribe Cylapini
FIGURE 19. Female genitalia. a, b, d, e. Bursa copulatrix (dorsal view); c. Ventral labiate plate (ventral view, with remainder of bursa copulatrix dissected); f, g. Bursa copulatrix, posterior wall. a–c. Peltidocylapus parallelus; d, e, f. Peltidocylapus simplex; g. Cylapus tenuicornis. dlp = dorsal labiate plate; odl = lateral oviduct; sd = seminal depository; sg = spermathecal gland; sr = sclerotized ring; vlp = ventral labiate plate.
FIGURE 18. Female genitalia. a–c in Revised classification of the New World Cylapini (Heteroptera: Miridae: Cylapinae): taxonomic review of the genera Cylapinus, Cylapoides and Peltidocylapus and a morphology-based phylogenetic analysis of tribe Cylapini
FIGURE 18. Female genitalia. a–c. Bursa copulatrix (dorsal view); d. Ventral labiate plate (ventral view, with remainder of bursa copulatrix dissected). a. Peltidocylapus calyciformis; b–d. Peltidocylapus ecuadorensis. dlp = dorsal labiate plate; odl = lateral oviduct; sd = seminal depository; sg = spermathecal gland; sr = sclerotized ring; vlp = ventral labiate plate.
FIGURE 13. Male genitalia. a, g, m in Revised classification of the New World Cylapini (Heteroptera: Miridae: Cylapinae): taxonomic review of the genera Cylapinus, Cylapoides and Peltidocylapus and a morphology-based phylogenetic analysis of tribe Cylapini
FIGURE 13. Male genitalia. a, g, m. Endosoma (dorsal view); d, j, p. Left paramere (right lateral view). e, k, q. Left paramere (dorsal view). f, l, r. Right paramere (left lateral view). b, h, o. Endosoma (ventral view); c, i, n. Endosoma (lateral view). a–f. Peltidocylapus ecuadorensis; g–l. Peltidocylapus pallidus; m–r. Peltidocylapus parallelus. dss = distal part of ductus seminis inside endosoma. Scale bars 0.2 mm.
FIGURE 11. Scanning electron micrographs. a, e, g, m in Revised classification of the New World Cylapini (Heteroptera: Miridae: Cylapinae): taxonomic review of the genera Cylapinus, Cylapoides and Peltidocylapus and a morphology-based phylogenetic analysis of tribe Cylapini
FIGURE 11. Scanning electron micrographs. a, e, g, m. Dorsal habitus; b, n. Lateral habitus; h, l. Scutellum; c, f, i. Thoracic pleura; d, j, o. Tarsus. k. Pretarsal claw. a–d. Cylapinus minusculus; e, f. Cylapoides unicolor; g–j. Peltidocylapus caudatus; k. Peltidocylapus calyciformis; l. Peltidocylapus ecuadorensis; m–o. Peltidocylapus scutellaris.
A taxonomic study of Cucujus Fabricius, 1775 from Asia (Coleoptera: Cucujidae), with descriptions of new species and notes on morphological classification
<p>Primary pictures for comparison.</p>
FIGURE. Chamaecrista barbata. A. Habit, B–D. Flowery branches, E. Inflorescence, F in Taxonomic revision of Chamaecrista sect. Absus subsect. Absus (Leguminosae, Caesalpinioideae) with adjustments in the new classification
FIGURE. Chamaecrista barbata. A. Habit, B–D. Flowery branches, E. Inflorescence, F. Detail of the branch with exfoliating bark, G. Buds, H. Fruits. Photographs by A.O. Souza.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.