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Dataset results
505 results for “Complete genomes”
Complete genome of the Medicago anthracnose fungus, Colletotrichum destructivum, reveals a mini-chromosome-like region within a core chromosome.
GEO Series GSE246592. Colletotrichum destructivum. 3 samples. Type: Expression profiling by high throughput sequencing.
Genome-Wide DNA Methylation Meta-analysis in the Brains of Suicide Completers I
GEO Series GSE137222. Homo sapiens. 58 samples. Type: Methylation profiling by array.
Figure 1 from: Wu Y-A, Gao J-W, Cheng X-F, Xie M, Yuan X-P, Liu D, Song R (2020) Characterization and comparative analysis of the complete mitochondrial genome of Azygia hwangtsiyui Tsin, 1933 (Digenea), the first for a member of the family Azygiidae. ZooKeys 945: 1-16. https://doi.org/10.3897/zookeys.945.49681
Figure 1 An annular diagram of the Azygia hwangtsiyui mitochondrial genome.
The data of complete chloroplast genome sequence of Tilia miqueliana (Malvaceae) in China
<p>This dataset includes the complete chloroplast genome of Tilia miqueliana (Malvaceae) in China.</p>
The complete mitochondrial genome of the tropical oyster Saccostrea echinata (Bivalvia: Ostreidae) from the South China Sea
<p><strong>Complete mitogenome of the tropical oyster <em>Saccostrea echinata</em> as fasta file.</strong></p>
Figure 2 from: Qi L, Kong L, Li Q (2020) Redescription of Stenothyra glabra A. Adam, 1861 (Truncatelloidea, Stenothyridae), with the first complete mitochondrial genome in the family Stenothyridae. ZooKeys 991: 69-83. https://doi.org/10.3897/zookeys.991.51408
Figure 2 Map of the complete mitochondrial genome of Stenothyra glabra.
Figure 3 from: Shan W, Tursun M, Zhou S, Zhang Y, Dai H (2021) Complete mitochondrial genome sequence of Lepus yarkandensis Günther, 1875 (Lagomorpha, Leporidae): characterization and phylogenetic analysis. ZooKeys 1012: 135-150. https://doi.org/10.3897/zookeys.1012.59035
Figure 3 Evolutionary rates of the Lepus yarkandensis mitogenome by Ka/Ks.
Figure 2 from: Shan W, Tursun M, Zhou S, Zhang Y, Dai H (2021) Complete mitochondrial genome sequence of Lepus yarkandensis Günther, 1875 (Lagomorpha, Leporidae): characterization and phylogenetic analysis. ZooKeys 1012: 135-150. https://doi.org/10.3897/zookeys.1012.59035
Figure 2 GC and AT skews for mitochondrial PCGs in Lepus yarkandensis.
Figure 2 from: Zheng L-P, Geng Y-M (2024) Complete mitochondrial genome of Guigarra cailaoensis Wang, Chen & Zheng, 2022 (Cypriniformes, Cyprinidae) and its phylogenetic implications. ZooKeys 1190: 75-89. https://doi.org/10.3897/zookeys.1190.113808
Figure 2 Relative synonymous codon usage (RSCU) in mitogenomes of Guigarra cailaoensis.
Figure 3 from: Zheng L-P, Geng Y-M (2024) Complete mitochondrial genome of Guigarra cailaoensis Wang, Chen & Zheng, 2022 (Cypriniformes, Cyprinidae) and its phylogenetic implications. ZooKeys 1190: 75-89. https://doi.org/10.3897/zookeys.1190.113808
Figure 3 Secondary structures of 22 tRNA genes in Guigarra cailaoensis.
Figure 1 from: Zheng L-P, Geng Y-M (2024) Complete mitochondrial genome of Guigarra cailaoensis Wang, Chen & Zheng, 2022 (Cypriniformes, Cyprinidae) and its phylogenetic implications. ZooKeys 1190: 75-89. https://doi.org/10.3897/zookeys.1190.113808
Figure 1 Circular map of complete mitogenome of Guigarra cailaoensis.
Figure 6 from: Yılmaz E, Mann DG, Gastineau R, Trobajo R, Solak CN, Górecka E, Turmel M, Lemieux C, Ertorun N, Witkowski A (2024) Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny. PhytoKeys 241: 27-48. https://doi.org/10.3897/phytokeys.241.118903
Figure 6 Map of the plastid genome of Navicula vanseea sp. nov. SZCZEY2262.
Figure 5 from: Yılmaz E, Mann DG, Gastineau R, Trobajo R, Solak CN, Górecka E, Turmel M, Lemieux C, Ertorun N, Witkowski A (2024) Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny. PhytoKeys 241: 27-48. https://doi.org/10.3897/phytokeys.241.118903
Figure 5 Map of the mitochondrial genome of Navicula vanseea sp. nov. SZCZEY2262.
Figure 7 from: Yılmaz E, Mann DG, Gastineau R, Trobajo R, Solak CN, Górecka E, Turmel M, Lemieux C, Ertorun N, Witkowski A (2024) Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny. PhytoKeys 241: 27-48. https://doi.org/10.3897/phytokeys.241.118903
Figure 7 Map of the plastid genome of Navicula vanseea sp. nov. SZCZEY2172.
Figure 1 from: Zhao W, Liu D, Jia Q, Wu X, Zhang H (2021) Characterization of the complete mitochondrial genome of Myrmus lateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses. ZooKeys 1070: 13-30. https://doi.org/10.3897/zookeys.1070.72742
Figure 1 The relative synonymous codon usage (RSCU) in the Myrmus lateralis mitogenome.
Figure 4 from: Zhao W, Liu D, Jia Q, Wu X, Zhang H (2021) Characterization of the complete mitochondrial genome of Myrmus lateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses. ZooKeys 1070: 13-30. https://doi.org/10.3897/zookeys.1070.72742
Figure 4 Predicted secondary structure of the rrnL in the Myrmus lateralis mitogenome.
Figure 6 from: Zhao W, Liu D, Jia Q, Wu X, Zhang H (2021) Characterization of the complete mitochondrial genome of Myrmus lateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses. ZooKeys 1070: 13-30. https://doi.org/10.3897/zookeys.1070.72742
Figure 6 The stem-loop of control region in the Myrmus lateralis mitogenome.
Figure 3 from: Zhao W, Liu D, Jia Q, Wu X, Zhang H (2021) Characterization of the complete mitochondrial genome of Myrmus lateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses. ZooKeys 1070: 13-30. https://doi.org/10.3897/zookeys.1070.72742
Figure 3 Predicted secondary structure of tRNA genes in the Myrmus lateralis mitogenome.
Figure 5 from: Zhao W, Liu D, Jia Q, Wu X, Zhang H (2021) Characterization of the complete mitochondrial genome of Myrmus lateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses. ZooKeys 1070: 13-30. https://doi.org/10.3897/zookeys.1070.72742
Figure 5 Predicted secondary structure of the rrnS in the Myrmus lateralis mitogenome.
Figure 3 from: Li W, Qiu N, Du H (2022) Complete mitochondrial genome of Rhodeus cyanorostris (Teleostei, Cyprinidae): characterization and phylogenetic analysis. ZooKeys 1081: 111-125. https://doi.org/10.3897/zookeys.1081.77043
Figure 3 Putative secondary structures of the 22 tRNAs of Rhodeus cyanorostris.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.