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601 results for “Global changes”
Global change of RNA expression upon silencing TET1 in PDX2 B-ALL cells
GEO Series GSE190851. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Global Epigenomic and Transcriptomic changes associated with Human Retinal Pigment Epithelial Epithelial-to-Mesenchymal Transition in a Stem Cell-based model of Epiretinal Membrane Formation
GEO Series GSE128144. Homo sapiens. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Global gene expression changes during the estrous cycle in equine endometrium
GEO Series GSE39043. Equus caballus. 25 samples. Type: Expression profiling by array.
Global Transcriptomic Shifts in Mitochondrial DNA-Depleted Neuronal Cells Reveal Alzheimer's Disease-Related Pathway Changes
GEO Series GSE309664. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.
Data and code for: Consistent population decline but idiosyncratic range shifts in Alpine orchids under global change
<p>Mountains are plant biodiversity hotspots considered particularly vulnerable to multiple environmental changes. Here, we quantify population changes and range-shift dynamics along elevational gradients over the last three decades for c. two-thirds of the orchid species of the European Alps. Local extinctions were more likely for small populations, after habitat alteration, and predominated at the rear edge of species’ ranges. Except for the most thermophilic species and wetland specialists, population density decreased over time. Declines were more pronounced for rear-edge populations possibly due to multiple pressures such as climate warming, habitat alteration, and mismatched ecological interactions. Besides these demographic trends, different species exhibited idiosyncratic range shifts with more than 50% of the species lagging behind climate warming. Our study highlights the importance of long-term monitoring of populations and range distributions at fine spatial resolution to be able to fully understand the consequences of global change for orchids</p>
Data from: Phenotypic interactions between tree hosts and invasive forest pathogens in the light of globalization and climate change
Invasive pathogens can cause considerable damage to forest ecosystems. Lack of coevolution is generally thought to enable invasive pathogens to bypass the defence and/or recognition systems in the host. Although mostly true, this argument fails to predict intermittent outcomes in space and time, underlining the need to include the roles of the environment and the phenotype in host–pathogen interactions when predicting disease impacts. We emphasize the need to consider host–tree imbalances from a phenotypic perspective, considering the lack of coevolutionary and evolutionary history with the pathogen and the environment, respectively. We describe how phenotypic plasticity and plastic responses to environmental shifts may become maladaptive when hosts are faced with novel pathogens. The lack of host–pathogen and environmental coevolution are aligned with two global processes currently driving forest damage: globalization and climate change, respectively. We suggest that globalization and climate change act synergistically, increasing the chances of both genotypic and phenotypic imbalances. Short moves on the same continent are more likely to be in balance than if the move is from another part of the world. We use Gremmeniella abietina outbreaks in Sweden to exemplify how host–pathogen phenotypic interactions can help to predict the impacts of specific invasive and emergent diseases. This article is part of the themed issue 'Tackling emerging fungal threats to animal health, food security and ecosystem resilience'.
Model output data of the paper: "Management induced changes of soil organic carbon on global croplands"
<p># Model output data of the paper: "Management induced changes of soil organic carbon on global croplands"<br> This data was prodused using the the MadRat framework and the mrsoil R-library by the R-script SOCBudget.R, which is stored together with the data. mrsoil is based on the R-libraries mrcommons, mrmagpie and mrvalidation.</p> <p>### REFERENCES<br> Dietrich J, Baumstark L, Wirth S, Giannousakis A, Rodrigues R, Bodirsky B, Kreidenweis U, Klein D (2020). _madrat: May All Data be<br> Reproducible and Transparent (MADRaT)_. doi: 10.5281/zenodo.1115490 (URL: https://doi.org/10.5281/zenodo.1115490), R package version<br> 1.86.0, <URL: https://github.com/pik-piam/madrat>.</p> <p>rstens K, Dietrich J (2020). _mrsoil: MadRat Soil Organic Carbon Budget Library_. doi: 10.5281/zenodo.4317933 (URL:<br> https://doi.org/10.5281/zenodo.4317933), R package version 1.1.0, <URL: https://github.com/pik-piam/mrsoil>.</p> <p>Bodirsky B, Karstens K, Baumstark L, Weindl I, Wang X, Mishra A, Wirth S, Stevanovic M, Steinmetz N, Kreidenweis U, Rodrigues R, Popov<br> R, Humpenoeder F, Giannousakis A, Levesque A, Klein D, Araujo E, Beier F, Oeser J, Pehl M, Leip D, Molina Bacca E, Martinelli E,<br> Schreyer F, Dietrich J (2020). _mrcommons: MadRat commons Input Data Library_. doi: 10.5281/zenodo.3822009 (URL:<br> https://doi.org/10.5281/zenodo.3822009), R package version 0.11.10, <URL: https://github.com/pik-piam/mrcommons>.</p> <p>Karstens K, Dietrich J, Chen D, Windisch M, Alves M, Beier F, v. Jeetze P, Mishra A, Humpenoeder F (2020). mrmagpie: madrat based MAgPIE Input Data Library. doi: 10.5281/zenodo.4319612 (URL: https://doi.org/10.5281/zenodo.4319612), R package version 0.31.0, <URL: https://github.com/pik-piam/mrmagpie>.</p> <p>Bodirsky B, Wirth S, Karstens K, Humpenoeder F, Stevanovic M, Mishra A, Biewald A, Weindl I, Chen D, Molina Bacca E, Kreidenweis U, W. Yalew A, Humpenoeder<br> F, Wang X, Dietrich J (2020). _mrvalidation: madrat data preparation for validation purposes_. doi: 10.5281/zenodo.4317826 (URL:<br> https://doi.org/10.5281/zenodo.4317826), R package version 2.5.0, <URL: https://github.com/pik-piam/mrvalidation>.</p> <p>## LICENSE<br> This data is open-source: you can redistribute it and/or modify it under the terms of the **CC Attribution 4.0 International** as published by the Creative Commons Corporation at https://creativecommons.org/licenses/by/4.0/legalcode.</p> <p>## CONTACT<br> karstens@pik-potsdam.de</p>
Codes for "Intensifying Inverse KE Cascade Over Energetic Oceans Under Global Warming" By Geng et al. Submitted to Nature Climate Change
<p>This repository contains the necessary codes for the study of "Intensification of Oceanic Inverse Energy Cascade Under Global Warming" .</p> <p>Specifically, this repository contains the following items:</p> <p>(1) The codes for computing the global kinetic energy cascade, the four metrics of inverse KE cascade and their trends.</p> <p>(2) The function codes needed for coarse-graining filtering and trend analysis.</p> <p>(3) Necessary data for running the programs at MATLAB.</p>
Data for "Response of global forest management to changes in future wood demand"
Open the record for dataset details and reuse information.
Observation of Change in Clinical Global Impression Scores in Schizophrenia Patients Receiving Seroquel XR Treatment
ClinicalTrials.gov study NCT00758251. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Changes in Regional and Global Cardiac Contractility After Stimulation in Scar Zone with the NOGA System
ClinicalTrials.gov study NCT04757168. IPD Sharing: NO. Countries: 1. Publications: 0.
Changes in Out-patient Visits in Taiwan During the Time of Global COVID-19 Pandemic
ClinicalTrials.gov study NCT04497467. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Health Related Quality of Life Following Hepatectomy for Colorectal Liver Metastasis: Global and Disease Specific Changes Over Time
ClinicalTrials.gov study NCT02399995. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Global transcriptomic changes in P. falciparum NF54 gametocytes treated with the histone demethylase inhibitor ML324
GEO Series GSE157420. Plasmodium falciparum. 2 samples. Type: Expression profiling by array.
Global Chromatin Changes resulting from Single Gene Inactivation – the Role of SMARCB1 in Malignant Rhabdoid Tumor
GEO Series GSE174446. Homo sapiens. 60 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dishevelled-1 regulates global transcriptomic changes in MDA-MB-231 triple negative breast cancer cells (RNA-Seq).
GEO Series GSE249322. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Analysis of physiological and gene expression changes related to Vibrio harveyi adaptation in the time of global warming
GEO Series GSE113564. Vibrio harveyi. 12 samples. Type: Expression profiling by high throughput sequencing.
Global analysis of DNA methylation changes during progression of oral tumorigenesis
GEO Series GSE46802. Homo sapiens. 60 samples. Type: Methylation profiling by array; Expression profiling by array.
Global changes in the nuclear positioning of chromatin domains and genomic interactions that orchestrate B cell fate
GEO Series GSE40173. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Global transcriptomic changes following elevated carbon dioxide (5%) in the wild-type (WT) and mutant (M2; RNAi-knockdown line of carbonic anhydrase (CA2)) Nannochloropsis oceanica IMET1: Illumina seq
GEO Series GSE115445. Nannochloropsis oceanica. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.