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These arboreal ants (Cephalotes atratus) have evolved closely with the trees they live in. Photograph: Field Museum, Corrie Moreau. in The Evolution of Natural History Collections
These arboreal ants (Cephalotes atratus) have evolved closely with the trees they live in. Photograph: Field Museum, Corrie Moreau.
FIGURE 5 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 5. Cophyla fortuna sp. nov., preserved holotype ZSM 467/2016 (MSZC 260) in dorsal and ventral views.
FIGURE 2 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 2. Maximum likelihood tree of Cophyla species calculated from 492 bp of the nuclear RAG-1 gene. Values at nodes represent bootstrap support from 100 replicates (not shown if <50%). Note that the small number of informative sites does not allow robust phylogenetic inference from this short gene fragment; the tree is thus primarily shown to illustrate that no haplotype sharing occurs among Cophyla species, and the new species C. fortuna sp. nov. and its sister lineage (see Fig. 1) C. noromalalae are reciprocally monophyletic for this marker. The tree was rooted with Platypelis tuberifera (removed graphically from the tree to improve visibility of intra-generic relationships and branch lengths). The new species, C. fortuna sp. nov., corresponds to the lineage previously named C. sp. Ca4.
FIGURE 1 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 1. Maximum likelihood tree of Cophyla species from an unpartitioned analysis based on 2123 bp of four mitochondrial gene fragments (12S, 16S, cob, cox1). Values at nodes represent bootstrap support from 500 replicates (not shown if <50%) and Bayesian posterior probabilities from a partitioned BI analysis of the same data set (not shown if BI consensus tree did not include the respective node). Note that the position of the candidate species, C. sp. Ca5 and Ca6, is based on the 16S gene only as the other genes have not yet been sequenced for these lineages. The tree was rooted with Platypelis tuberifera (removed graphically from the tree to improve visibility of intra-generic relationships and branch lengths). In some cases of branch length differences between individuals from the same site, these are due to missing data for some genes and do not reflect strong genetic differences. The new species, C. fortuna sp. nov., corresponds to the lineage previously named C. sp. Ca4.
FIGURE 4 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 4. Cophyla fortuna sp. nov. in life: a. Calling male, specimen not collected; b. Holotype ZSM 467/2016 (MSZC 260) calling (see video at https://youtu.be/Kjw10jofNSY); c–d. ZSM 470/2016 (ZCMV 15142); e–f. ZSM 471/2016 (ZCMV 15147); g–h. ZSM 472/2016 (ZCMV 15151).
FIGURE 7 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 7. Spectrograms (upper panels) and oscillograms (lower panels) of advertisement calls of (a–b) Cophyla fortuna sp. nov. holotype ZSM 467/2016 (MSZC 0260), and (c–d) C. noromalalae, ZSM 68/2018 (MSZC 0652). On the left, single calls in sections of 1 s duration; on the right, parts of a call series in sections of 10 s duration.
FIGURE 3 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 3. Map of northern Madagascar, showing the reliably known occurrence records of species of Cophyla.
FIGURE 6 in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
FIGURE 6. Cophyla cf. fortuna sp. nov. in life from Fanambana in dorsolateral (a) and ventral (b) views; call voucher, ZSM 1617/2012 (FGZC 3951).
APPENDIX. GenBank accession numbers of all DNA sequences of Cophyla used in this study. NA, not applicable. Asterisks mark cases where sequences from different samples were combined to chimeric terminals for analysis. in Description of the lucky Cophyla (Microhylidae, Cophylinae), a new arboreal frog from Marojejy National Park in north-eastern Madagascar
APPENDIX. GenBank accession numbers of all DNA sequences of Cophyla used in this study. NA, not applicable. Asterisks mark cases where sequences from different samples were combined to chimeric terminals for analysis.
Figure 8 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 8: Estimated detection probability with 95 % confidence interval for models run using each combination of cameras for black-bellied pangolins. For example, with 1 camera there are 6 combinations, either only camera 1, 2, 3, 4, 5, or 6. Red X's at 0 represent models that did not have enough detections for model convergence.
Figure 6 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 6: Map showing the location of where black-bellied pangolin were detected during the study. Sites with a black dot were sites where cameras were placed but no black-bellied pangolin were detected, aqua are sites where 1 of the 6 cameras at the site detected the pangolin, and yellow are sites where 3 of the 6 cameras at the site detected pangolin.
Figure 7 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 7: Relationship between the linear (height) effect of camera height (A), the quadratic (height + height2) effect of camera height (B), the linear (zone) effect of camera zone (C), and the quadratic (zone + zone2) effect of camera zone (D) on detection probability for black-bellied pangolin.
Figure 4 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 4: Relationship between camera zone and detection probability for white-bellied pangolin using the model zone + zone2 on detection probability.
Figure 5 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 5: Estimated detection probability with 95 % confidence interval for models run using each combination of cameras for white-bellied pangolins. For example, with 1 camera there are 6 combinations, either only camera 1, 2, 3, 4, 5, or 6. Red X's at 0 represent models that did not have enough detections for model convergence.
Figure 3 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 3: Map showing white-bellied pangolin detection locations during the study. Black dot are sites where cameras were placed but no white-bellied pangolin were detected,aqua are sites where 1 of the 6 cameras at the site detected the pangolin, and yellow are sites where 3 of the 6 cameras at the site detected pangolin.
Figure 1 in Insights into surveying pangolins using ground and arboreal camera traps
Figure 1: Location of camera trap survey locations for 2022 shown with yellow dots, as well as previous camera trap locations, shown with black dots.The map also shows rivers, roads, as well as the central, buffer, and transition zones of the park.
Figure 2 in A treetop diner: camera trapping reveals novel arboreal foraging by fishing cats on colonial nesting birds in Bangladesh
Figure 2: Photo sequence of the arboreal predatory behaviour of the fishing cat captured on camera traps in northeast Bangladesh arranged in a clockwise sequence. (A–F) The first event on 03 August, 2022. (G–L) The second event on 02 October, 2022 (for descriptions see Table 1).
Figure 1 in A treetop diner: camera trapping reveals novel arboreal foraging by fishing cats on colonial nesting birds in Bangladesh
Figure 1: Location of the bird colony where the arboreal predatory behaviour of the fishing cat was captured on camera traps in northeast Bangladesh. (A) Fishing cat range in Bangladesh. (B) Northeast Bangladesh. (C) The Indian Oak/Hijal tree. Red circles denote the placement of the camera traps. The range map in Bangladesh is adapted from Mukherjee et al. (2016).
Figure 3 in Unprecedented habitat use by an arboreal Neotropical marsupial (Didelphimorphia: Didelphidae) in the Cerrado
Figure 3: Photos of two of the five individuals of the brown-eared woolly opossum (Caluromys lanatus) captured in pitfall traps in gallery forests of the Brazilian Cerrado.
Figure 2 in Unprecedented habitat use by an arboreal Neotropical marsupial (Didelphimorphia: Didelphidae) in the Cerrado
Figure 2: Pitfall traps that were used to capture brown-eared woolly opossum (Caluromys lanatus) for the first time on the ground in the Brazilian Cerrado.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.