Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
699
datasets available to search
ShareScore release 0.9.0
Dataset results
699 results for “biofilm.”
Polyphenols from olive mill waste affect biofilm formation and motility in Escherichia coli K12
GEO Series GSE42205. Escherichia coli str. K-12 substr. MG1655; Escherichia coli CFT073; Escherichia coli O157:H7 str. Sakai; Escherichia coli K-12; Escherichia coli O157:H7 str. EDL933. 27 samples. Type: Expression profiling by array.
Clostridium difficile Biofilm with and without deoxycholate at 48H
GEO Series GSE85982. Clostridioides difficile. 4 samples. Type: Expression profiling by array.
BolA is a transcriptional switch that turns off motility and turns on biofilm development (ChIP-seq)
GEO Series GSE58623. Escherichia coli. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcriptomic Landscape of Leptospira Forming Biofilm Reveals Adaptation to Starvation and General Stress while Maintaining Virulence.
GEO Series GSE271193. Leptospira interrogans serovar Manilae. 8 samples. Type: Expression profiling by high throughput sequencing.
Downregulation of autolysin-encoding genes by phage-derived lytic proteins inhibits biofilm formation in Staphylococcus aureus
GEO Series GSE94512. Staphylococcus aureus. 6 samples. Type: Expression profiling by high throughput sequencing.
Pseudomonas aeruginosa clinical isolates can encode functional plastic degrading enzymes that allow survival on plastic and augment biofilm formation
GEO Series GSE275972. Pseudomonas aeruginosa. 6 samples. Type: Expression profiling by high throughput sequencing.
Temporal transcriptome analysis of Bacillus subtilis NDmed in the submerged biofilm model
GEO Series GSE190460. Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168. 7 samples. Type: Expression profiling by array.
Transcriptome analysis of Streptococcus mutans biofilm cells deficient in the DpnII restriction-modification system
GEO Series GSE265916. Streptococcus mutans UA159. 6 samples. Type: Expression profiling by high throughput sequencing.
Temporal dynamics of gene expression in Campylobacter jejuni biofilm formation
GEO Series GSE272440. Campylobacter jejuni subsp. jejuni. 20 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and phenomic investigations reveal elements in biofilm repression and formation in the cyanobacterium Synechococcus elongatus PCC 7942 [RNA-seq]
GEO Series GSE205444. Synechococcus elongatus PCC 7942 = FACHB-805. 21 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide comparison of gene expression between biofilm and planktonic growth
GEO Series GSE85980. Clostridioides difficile. 4 samples. Type: Expression profiling by array.
The impact of manganese on biofilm development of Bacillus subtilis.
GEO Series GSE61232. Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168. 7 samples. Type: Expression profiling by array.
Identification of an ECF sigma factor that facilitates electroactive biofilm formation by Shewanella oneidensis MR-1: Experiment 1
GEO Series GSE142641. Shewanella oneidensis; Shewanella oneidensis MR-1. 8 samples. Type: Expression profiling by array.
Transcriptomic comparison of aerial and root cells of a wild yeast biofilm colony
GEO Series GSE98243. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by high throughput sequencing.
Comparison of planktonic and biofilm growth of Group A Streptococcus by high-throughput RNA sequencing (RNA-seq)
GEO Series GSE80659. Streptococcus pyogenes. 21 samples. Type: Expression profiling by high throughput sequencing.
Filamentation and Biofilm Formation are Regulated by the Phase-Separation Capacity of Network Transcription Factors in Candida albicans
GEO Series GSE245897. Candida albicans. 12 samples. Type: Expression profiling by high throughput sequencing.
Granulocytic myeloid-derived suppressor cell activity during biofilm infection is regulated by a glycolysis-HIF-1α axis
GEO Series GSE248055. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Role of the LytSR two-component regulatory system in Staphylococcus lugdunensis biofilm formation and pathogenesis
GEO Series GSE139909. Staphylococcus lugdunensis. 6 samples. Type: Expression profiling by array.
C. albicans biofilm development
GEO Series GSE61143. Candida albicans. 29 samples. Type: Expression profiling by array.
The dual GGDEF/EAL domain enzyme PA0285 is a Pseudomonas species housekeeping phosphodiesterase regulating early attachment and biofilm architecture
GEO Series GSE223663. Pseudomonas aeruginosa. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.