Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
996
datasets available to search
ShareScore release 0.9.0
Dataset results
996 results for “mouse brain”
A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment. [bulk RNA-Seq]
GEO Series GSE128781. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA181204_4G]
GEO Series GSE134940. Mus musculus. 959 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression profiling of the whole mouse brain at 3 weeks of post-natal age using transcriptome tomography
GEO Series GSE118178. Mus musculus. 28 samples. Type: Expression profiling by array.
RNAseq analysis of two PWS mouse model brains
GEO Series GSE198260. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.
Brain transcriptome analysis of a TPP-1 neuronal ceroid lipofuscinosis mouse model as disease progresses
GEO Series GSE173665. Mus musculus. 36 samples. Type: Expression profiling by high throughput sequencing.
RNA-SEQ of Satb1-knockdown in dopaminergic neurons from the mouse mid-brain
GEO Series GSE70133. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Comparison of gene expression signature between nascent Lhx6-GFP+ cells from mouse embryonic brain and differentiated Lhx6-GFP+ cells from ES cells (as well as comparing those of Lhx6-GFP+ and Lhx6-GF
GEO Series GSE43508. Mus musculus. 3 samples. Type: Expression profiling by array.
RNA sequencing of endothelial cells from mouse brain of WT and EC-specific Nf2-deleted mice
GEO Series GSE186189. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell Cut&Tag in the mouse brain
GEO Series GSE157637. Mus musculus. 17 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA180911_4H]
GEO Series GSE134617. Mus musculus. 1221 samples. Type: Methylation profiling by high throughput sequencing.
Molecular Atlas of the Adult Mouse Brain
GEO Series GSE147747. Mus musculus. 75 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of the aging mouse brain reveals origins of inflammation in the white matter
GEO Series GSE233983. Mus musculus. 44 samples. Type: Expression profiling by high throughput sequencing; Other.
Epigenomic Landscape of Mouse Brain by Single Nucleus Methylation Sequencing [CEMBA190219_9J]
GEO Series GSE135585. Mus musculus. 1226 samples. Type: Methylation profiling by high throughput sequencing.
Single cell and isoform-specific translational profiling of the mouse brain [ribostamp]
GEO Series GSE276504. Mus musculus. 6 samples. Type: Other.
Crnic Institute Human Trisome Project - Trisomy 21 Model Atlas: PolyA RNA-seq from 6-month old mouse brain cortex tissue ± JAK1/3 inhibition with tofacitinib
GEO Series GSE272693. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain [Single Cell RNAseq]
GEO Series GSE139193. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
microRNA-seq of TPR50 Tau P301S Transgenic Mouse in different brain regions and time-points
GEO Series GSE89983. Mus musculus. 276 samples. Type: Non-coding RNA profiling by high throughput sequencing.
A transcriptomic taxonomy of mouse brain-wide spinal projecting neurons
GEO Series GSE247602. Mus musculus. 4357 samples. Type: Expression profiling by high throughput sequencing.
Single nuclei RNA-seq of brain of mouse Alzheimer's disease model
GEO Series GSE143758. Mus musculus. 37 samples. Type: Expression profiling by high throughput sequencing.
Effects of hypoxia on brain gene expression in a mouse model of Parkinson’s disease
GEO Series GSE296779. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.