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485 results for “pathway analysis”

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geo16/100

Analysis of microRNA expression profiles and prediction of target gene signaling pathways in familial hypertrophic cardiomyopathy with myosin-binding protein C3 (MYBPC3) gene mutations

GEO Series GSE150078. Homo sapiens. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenMay 2021View details →
geo16/100

Analysis of genes regulated by miRNAs upon Toll pathway activation in shmCherry and shAgo1 flies

GEO Series GSE133877. Drosophila melanogaster. 12 samples. Type: Expression profiling by array.

openGEO-OpenJun 2024View details →
geo16/100

Pan-cancer molecular analysis of the RB-pathway

GEO Series GSE145316. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2020View details →
geo16/100

Transcriptomes and molecular pathway analysis of the liver in the red-eared slider turtle Trachemys scripta elegans under chronic salinity stress

GEO Series GSE117354. Trachemys scripta elegans. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →
geo16/100

Integrated analysis of miRNA-mRNA interactions reveals novel target pathways in hypertension-induced cardiac remodeling

GEO Series GSE144550. Rattus norvegicus. 36 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo16/100

Comprehensive transcriptome analysis of phytohormone pathway genes and miRNAs in ABA initiated strawberry receptacle ripening

GEO Series GSE63224. Fragaria x ananassa. 21 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing; Other.

openGEO-OpenOct 2016View details →
geo16/100

Differential transcriptome analysis of murine embryonic and lung fibroblasts in response to SHH pathway activation

GEO Series GSE126596. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2022View details →
geo16/100

Global Analysis of the Transcriptional Response of Chinese cabbage (Brassica rapa ssp. pekinensis) to Methyl Jasmonate Reveals JA Signaling on Enhancement of Secondary Metabolism Pathways

GEO Series GSE51363. Brassica rapa subsp. pekinensis. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2015View details →
geo16/100

Comparative transcriptome analysis implicates IL1R8-associated upregulation of myeloid leukocyte pathways in latent HCMV infection

GEO Series GSE173290. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2021View details →
geo16/100

Comprehensive analysis on the signaling pathway of Norrie disease protein (Ndp)

GEO Series GSE173393. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2021View details →
geo16/100

Transcriptome Analysis of Arabidopsis thaliana and Changes of Glucosinolates Metabolism Pathway Induced by Flg22

GEO Series GSE56117. Arabidopsis thaliana. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2017View details →
geo16/100

BRB-seq analysis of PFOS disruption of key developmental pathways during hiPSC-derived cardiomyocyte differentiation

GEO Series GSE202077. Homo sapiens. 80 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2022View details →
geo12/100

Pathways identified by toxicogenomics analysis reveal the size and dose independency of silica particles-induced toxicity in mice.

GEO Series GSE30861. Mus musculus. 35 samples. Type: Expression profiling by array.

openGEO-OpenAug 2011View details →
geo12/100

Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.

GEO Series GSE6155. Arabidopsis thaliana. 7 samples. Type: Expression profiling by array.

openGEO-OpenJan 2007View details →
geo12/100

A Novel Piperine Derivative Inhibits Colorectal Cancer Progression by Modulating EMT Signaling Pathways: An Integrated Transcriptomic and Machine Learning Analysis

GEO Series GSE275190. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2024View details →
geo12/100

Analysis of allogeneic and syngeneic CD8+ T cells reveals novel target genes and related pathway in acute graft-versus host disease

GEO Series GSE212137. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2022View details →
geo12/100

Transcriptome-wide Gene Expression Analysis in Peri-Implantitis Reveals Candidate Cellular Pathways

GEO Series GSE178351. Homo sapiens. 7 samples. Type: Expression profiling by array.

openGEO-OpenJun 2021View details →
geo12/100

Transcriptomic analysis of gene expression pathways influenced by toxic chemical exposure on the Caenorhabditis elegans cuticle.

GEO Series GSE300950. Caenorhabditis elegans. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo12/100

Multi-omics analysis of sarcospan overexpression in mdx skeletal muscle reveals compensatory remodeling of cytoskeleton-matrix interactions that promote mechanotransduction pathways

GEO Series GSE262341. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2024View details →
geo12/100

Transcriptome analysis reveals key genes and pathways that the nuclear receptor PPARα acts on vascular aging

GEO Series GSE198045. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record