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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Spatial transcriptomics reveals molecular cues underlying the site specificity of the adult mouse oral mucosa and its stem cell niches
GEO Series GSE267602. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics on human lumbar spinal cord
GEO Series GSE222322. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics]
GEO Series GSE230778. Gallus gallus. 4 samples. Type: Other.
Spatial Transcriptomics Reveals Inhba/Smad2/E2f4 Axis in Lrp2high Thecal Cell Proliferation in Androgen-Induced PCOS Mice
GEO Series GSE296728. Mus musculus. 4 samples. Type: Other.
The stem cell-type transcriptome of bioenergy sorghum reveals the spatial regulation of secondary cell wall networks
GEO Series GSE218642. Sorghum bicolor. 24 samples. Type: Expression profiling by high throughput sequencing.
Aging- and Alcohol-Associated Spatial Transcriptomic Signature in Mouse Acute Pancreatitis
GEO Series GSE235247. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Exploring an essential biomarker in pulmonary fibrosis: an integrated and cross-disease approach with spatial transcriptomics and single-cell RNA sequencing (Spatial Transcriptomics)
GEO Series GSE263976. Homo sapiens. 3 samples. Type: Other.
Positionally distinct interferon-stimulated dermal immune-acting fibroblasts promote neutrophil recruitment in Sweet's syndrome [Nanostring CosMx SMI spatial transcriptomics]
GEO Series GSE297091. Homo sapiens. 1 samples. Type: Other.
Spatial Transcriptome Assays Reveals Gliomas Heterogeneity
GEO Series GSE270355. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Host-Pathogen Interactions in the Plasmodium-Infected Mouse Liver at Spatial and Single-Cell Resolution (Spatial Transcriptomics 2k)
GEO Series GSE268018. Plasmodium berghei ANKA; Mus musculus. 38 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic analyses of distal colon cross-sections from mice fed high fiber and control diet
GEO Series GSE183696. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of human dorsal root ganglia from subjects with a history of diabetes
GEO Series GSE295206. Homo sapiens. 16 samples. Type: Other.
Kidney single-cell transcriptomes predict spatial corticomedullary gene expression and tissue osmolality gradients [Drop-seq]
GEO Series GSE145688. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data]
GEO Series GSE258959. Mus musculus. 4 samples. Type: Other.
Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics
GEO Series GSE299207. Mus musculus; Homo sapiens. 23 samples. Type: Other.
Salivary gland transcriptomic analysis in the IL-14α transgenic mouse model of Sjögren’s disease using Visium V1 3' spatial gene expression assay
GEO Series GSE298921. Mus musculus. 2 samples. Type: Other.
Cell type inference in human lung tissue by domain adaptation of single-cell and spatial transcriptomic data
GEO Series GSE172416. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Other.
An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus [snRNA-seq]
GEO Series GSE264624. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.
Precision targeting of beta-catenin induces tumor reprogramming and immunity in hepatocellular cancers [Spatial Transcriptomics by 10X Visium]
GEO Series GSE270975. Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics of the mouse brain across three age groups
GEO Series GSE212903. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.