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485
datasets available to search
ShareScore release 0.9.0
Dataset results
485 results for “pathway analysis”
Functional analysis of Mpk1-mediated cell wall integrity signaling pathway in the thermotolerant methylotrophic yeast Hansenula polymorpha
GEO Series GSE106861. Ogataea parapolymorpha. 2 samples. Type: Expression profiling by high throughput sequencing.
Analysis of allogeneic and syngeneic CD4+ T cells reveals novel target genes and related pathway in acute graft-versus host disease
GEO Series GSE212135. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Systematic analysis of ESCRT mutants reveals an essential function for the MVB pathway in amino acid recycling.
GEO Series GSE53774. Saccharomyces cerevisiae; Schizosaccharomyces pombe. 6 samples. Type: Expression profiling by array.
Gene expression profiling and pathway analysis of human bronchial epithelial cells exposed to airborne particulate matter collected from Saudi Arabia
GEO Series GSE38172. Homo sapiens. 12 samples. Type: Expression profiling by array.
Transcriptome analysis of Upland Cotton revealed novel pathways to scavenge reactive oxygen species (ROS) responding to Na2SO4 tolerance
GEO Series GSE167109. Gossypium hirsutum. 18 samples. Type: Expression profiling by high throughput sequencing.
Analysis of allogeneic and syngeneic CD3+ T cells reveals novel target genes and related pathway in acute graft-versus host disease
GEO Series GSE212129. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Analysis of the purified RNA samples to confirm that Notch pathway activation inhibits apoptosis in uterine leiomyomas leading to fibroid growth
GEO Series GSE28945. Homo sapiens. 20 samples. Type: Expression profiling by array.
Integrated transcriptome analysis of radioresistant cells revealed genes and pathways predictive of tumor response to radiotherapy and chemotherapy in breast cancer
GEO Series GSE210306. Homo sapiens. 8 samples. Type: Expression profiling by array.
Transcriptional analysis of physiological pathways in a generalist herbivore: responses to different host plants and plant structures by the cotton bollworm (CBW) Helicoverpa armigera
GEO Series GSE34349. Helicoverpa armigera. 72 samples. Type: Expression profiling by array.
Genome-wide analysis of gonadotropin-dependent gene expression and crosstalk of the regulatory pathways in the female ovaries
GEO Series GSE77479. Mus musculus. 17 samples. Type: Expression profiling by array.
Transcriptome analysis reveals the effect of STAT3 gene of JAK-STAT signaling pathway on apoptosis of Brucella macrophages
GEO Series GSE284112. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway towards SARS-CoV-2
GEO Series GSE244488. Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Pathway analysis of miRNA revealing immunologic alteration in lymphocyte immune response and T cell differentiation in Fontan patients with protein-losing enteropathy
GEO Series GSE130647. synthetic construct; Homo sapiens. 46 samples. Type: Non-coding RNA profiling by array.
Integrative analysis of the biodegradation of acetone/isopropanol by Cupriavidus metallidurans CH34: proposal of a metabolic pathway
GEO Series GSE33578. Cupriavidus metallidurans CH34. 3 samples. Type: Expression profiling by array.
A microarray analysis highlights the role of tetrapyrrole pathways in grapevine responses to stolbur phytoplasma, phloem virus infections and recovered status
GEO Series GSE52540. Vitis vinifera. 30 samples. Type: Expression profiling by array.
RT quantitative PCR analysis of p53 Signaling Pathway related genes in mice choclea after noise exposure.
GEO Series GSE116460. Mus musculus. 16 samples. Type: Expression profiling by RT-PCR.
A Wide-Proteome Analysis to Identify Molecular Pathways Involved in Kidney Response to High-Fat Diet in Mice
<p>Dozio E, Maffioli E, Vianello E, Nonnis S, Grassi Scalvini F, Spatola L, Roccabianca P, Tedeschi G, Corsi Romanelli MM. A Wide-Proteome Analysis to Identify Molecular Pathways Involved in Kidney Response to High-Fat Diet in Mice. Int J Mol Sci. 2022 Mar 30;23(7):3809. doi: 10.3390/ijms23073809. PMID: 35409168; PMCID: PMC8999052.</p> <p>Abstract</p> <p>The etiopathogenesis of obesity-related chronic kidney disease (CKD) is still scarcely understood. To this aim, we assessed the effect of high-fat diet (HF) on molecular pathways leading to organ damage, steatosis, and fibrosis. Six-week-old male C57BL/6N mice were fed HF diet or normal chow for 20 weeks. Kidneys were collected for genomic, proteomic, histological studies, and lipid quantification. The main findings were as follows: (1) HF diet activated specific pathways leading to fibrosis and increased fatty acid metabolism; (2) HF diet promoted a metabolic shift of lipid metabolism from peroxisomes to mitochondria; (3) no signs of lipid accumulation and/or fibrosis were observed, histologically; (4) the early signs of kidney damage seemed to be related to changes in membrane protein expression; (5) the proto-oncogene MYC was one of the upstream transcriptional regulators of changes occurring in protein expression. These results demonstrated the potential usefulness of specific selected molecules as early markers of renal injury in HF, while histomorphological changes become visible later in obesity-related CDK. The integration of these information with data from biological fluids could help the identification of biomarkers useful for the early detection and prevention of tissue damage in clinical practice.</p>
Transcriptome analysis of miRNA–mRNA interactions revealed regulation of multiple signaling pathways in genetically improved farmed tilapia (GIFT, Oreochromis niloticus) gill tissues under hypoxia str
GEO Series GSE146050. Oreochromis niloticus. 6 samples. Type: Expression profiling by high throughput sequencing.
Bioinformatics analysis of miRNAs and mRNAs network - Xuefu Zhuyu decoction exerts neuroprotection of traumatic brain injury mice through modulation of MAPK signaling pathway
GEO Series GSE202945. Mus musculus. 10 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Pathway-focused (Ostegenesis) gene expression analysis of healthy, injured and treated rat entheses samples
GEO Series GSE188540. Rattus norvegicus. 9 samples. Type: Expression profiling by RT-PCR.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.