Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
5,436
datasets available to search
ShareScore release 0.9.0
Dataset results
5,436 results for “phylogenetic species”
Linked collectors and determiners for: New species and phylogenetic relationships of the spider genus Coptoprepes using morphological and sequence data (Araneae: Anyphaenidae).
Natural history specimen data linked to collectors and determiners held within, "New species and phylogenetic relationships of the spider genus Coptoprepes using morphological and sequence data (Araneae: Anyphaenidae)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70">https://bionomia.net/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70">https://gbif.org/dataset/8ceb6188-a9e2-4687-b929-47e5f380ed70</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: A new species of Hyloscirtus (Anura, Hylidae) from the Colombian and Venezuelan slopes of Sierra de Perijá, and the phylogenetic position of Hyloscirtus jahni (Rivero, 1961).
Natural history specimen data linked to collectors and determiners held within, "A new species of Hyloscirtus (Anura, Hylidae) from the Colombian and Venezuelan slopes of Sierra de Perijá, and the phylogenetic position of Hyloscirtus jahni (Rivero, 1961)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/266ff2b3-8358-436f-ad80-e07c70f2203f">https://bionomia.net/dataset/266ff2b3-8358-436f-ad80-e07c70f2203f</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/266ff2b3-8358-436f-ad80-e07c70f2203f">https://gbif.org/dataset/266ff2b3-8358-436f-ad80-e07c70f2203f</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Cryptic diversity within the Megophrys major species group (Amphibia: Megophryidae) of the Asian Horned Frogs: Phylogenetic perspectives and a taxonomic revision of South Asian taxa, with descriptions of four new species.
Natural history specimen data linked to collectors and determiners held within, "Cryptic diversity within the Megophrys major species group (Amphibia: Megophryidae) of the Asian Horned Frogs: Phylogenetic perspectives and a taxonomic revision of South Asian taxa, with descriptions of four new species". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/23903efe-ba7a-438c-a04f-d4b08680b640">https://bionomia.net/dataset/23903efe-ba7a-438c-a04f-d4b08680b640</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/23903efe-ba7a-438c-a04f-d4b08680b640">https://gbif.org/dataset/23903efe-ba7a-438c-a04f-d4b08680b640</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Revision of the Neotropical species of Aphilodontinae (Geophilomorpha, Geophilidae), with eight new species and a first phylogenetic analysis of the subfamily.
Natural history specimen data linked to collectors and determiners held within, "Revision of the Neotropical species of Aphilodontinae (Geophilomorpha, Geophilidae), with eight new species and a first phylogenetic analysis of the subfamily". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/1c94057f-64de-4f19-b047-2223e4d664e8">https://bionomia.net/dataset/1c94057f-64de-4f19-b047-2223e4d664e8</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/1c94057f-64de-4f19-b047-2223e4d664e8">https://gbif.org/dataset/1c94057f-64de-4f19-b047-2223e4d664e8</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Comparative geometric morphometrics of male genitalia in Xiphocentron subgenera (Trichoptera: Xiphocentronidae): new species, revision and phylogenetic systematics of the subgenus Sphagocentron.
Natural history specimen data linked to collectors and determiners held within, "Comparative geometric morphometrics of male genitalia in Xiphocentron subgenera (Trichoptera: Xiphocentronidae): new species, revision and phylogenetic systematics of the subgenus Sphagocentron". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/69a3ae72-af6c-4b7b-a4b1-7af0ed275a43">https://bionomia.net/dataset/69a3ae72-af6c-4b7b-a4b1-7af0ed275a43</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/69a3ae72-af6c-4b7b-a4b1-7af0ed275a43">https://gbif.org/dataset/69a3ae72-af6c-4b7b-a4b1-7af0ed275a43</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Description and phylogenetic placement of a new species of Patania (Lepidoptera Crambidae: Spilomelinae) resembling P. harutai (Inoue, 1955).
Natural history specimen data linked to collectors and determiners held within, "Description and phylogenetic placement of a new species of Patania (Lepidoptera Crambidae: Spilomelinae) resembling P. harutai (Inoue, 1955)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/8a955c2b-a747-4d79-9483-04244ec6d617">https://bionomia.net/dataset/8a955c2b-a747-4d79-9483-04244ec6d617</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/8a955c2b-a747-4d79-9483-04244ec6d617">https://gbif.org/dataset/8a955c2b-a747-4d79-9483-04244ec6d617</a>. Formatted as a Frictionless Data package.
Fig. 6. A in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 6. A, Arthrorhaphis aeruginosa (TØnsberg 19019, BG, holotype); B, A. arctoparmeliae (Kocourková & Kocourek JK5484 dpl., C); C, A. olivaceae (Santesson 11677, BG, isotype); D, A. muddii (Woods s.n., E, holotype); E, A. grisea (Th.M. Fries s.n., UPS, holotype); F, A. vulgaris (Norrlin s.n., H). — Scale: A–C, 0.5 mm; D–F, 1 mm. Photos: A. Frisch.
Fig. 5 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 5. Ascospore types distinguished in lichenised Arthrorhaphis (schematic redrawing based on illustrations in Obermayer, 1994, 1995; compare the cited literature for further details). A, Citrinella type; B, Alpina type; C, Vacillans type; D, Jungens type. — Ascospores of the citrinella type are arranged parallel, 1-seriate, while those of the alpina, vacillans, and jungens types are stacked in the asci. Ascospores of the variable jungens type are intermediary between the alpina and vacillans types, and either resembling the vacillans type but longer, or similar in size but 4–5(–7)-septate. — Scale: A–D, 10 μm.
Fig. 1. Bayesian 50 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 1. Bayesian 50% majority-rule consensus tree from analysis of MSA-1, showing the placement of Arthrorhaphis as sister to Ostropales, Ostropomycetidae. Branches supported by BPP ≥ 0.95 and ML BS ≥ 70% are indicated by bold black lines; branches supported only by BPP ≥ 0.95 are indicated by bold grey lines. Numbers in brackets represent clades discussed in the text.
Fig. 2. Bayesian 50 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 2. Bayesian 50% majority-rule consensus tree from analysis of MSA-2, showing the basal position of the exclusively parasitic species in Arthrorhaphis. The evolution of lichenised thalli containing pulvinic acid derivatives in the A. alpina- and the A. citrinella s.l. clades is indicated by an asterisk. Branches supported by BPP ≥ 0.95 and ML BS ≥ 70% are indicated by bold black lines; branches supported only by BPP ≥ 0.95 are indicated by bold grey lines. Numbers in brackets represent clades discussed in the text. Graphical representation of species delimitations in bGMYC, bPtP and bP&P: Colours represent delimited species for each species delimitation analysis independently, but have been selected to highlight delimitations congruent across analyses. White represents missing data. The colouring scheme applies only to the current figure.
Fig. 4 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 4. Partial representation of the Bayesian 50% majority-rule consensus tree from analysis of MSA-2, showing the Arthrorhaphis citrinella s.l. clade. Branches supported by BPP ≥ 0.95 and ML BS ≥ 70% are indicated by bold black lines; branches supported only by ML BS ≥ 70% are indicated by thin double lines. Numbers in brackets represent clades discussed in the text. Character states: 1 Life form: juvenile parasitism absent (light green), present (reddish brown), missing data (white). 2 Thallus areolae: present (yellow), absent (white); 3 Soredia: citrinella type (turquoise), farinosa type (light green), vulgaris type (dark green), absent (white); 4 Medulla: pale yellow (yellow), cavity (grey), absent (white); 5 Ca-oxalate crystals: absent (white); 6 Ascospores: citrinella type (blue), absent (white). Graphical representation of species delimitations in bGMYC, bPtP, and bP&P: Colours represent delimited species for each species delimitation analysis independently, but have been selected to highlight delimitations congruent across analyses. White represents missing data. The colouring scheme applies only to the current figure.
Fig. 8. A in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato
Fig. 8. A, Arthrorhaphis alpina (Schaer., Lichenes Helvetici Exsiccati 532, G, lectotype); B, A. alpina var. jungens (Lichenotheca Graecensis 23, E, isotype); C, A. alpina (Ohmura 10119, TNS); D, A. alpina var. jungens (Kalb, Lichenes Neotropici 577, M); E, A. alpina (Brusse 4515, UPS); F, "A. septentrionalis" (Hansen 026, C). — Scale: A–F, 1 mm. Photos: A. Frisch.
FIGURE 7 in Revision of the Endemic Malagasy Cavefish Genus Typhleotris (Teleostei: Gobiiformes: Milyeringidae), with Discussion of its Phylogenetic Placement and Description of a New Species
FIGURE 7. Dorsal view of the anterior portion of the head in the three described species of Typhleotris: A. T. madagascariensis, AMNH 245603; B. T. pauliani, AMNH 245651; C. T. mararybe, AMNH 245601, holotype.
Figure 19. A in New gammaroid family, genera and species from subterranean waters of Japan, and their phylogenetic relationships (Crustacea: Amphipoda)
Figure 19. A, strict consensus tree obtained by maximum parsimony analysis; B, neighbour-joining tree. Numbers near branches indicate bootstrap values> 50%. Trees rooted by the outgroup taxon Melita sp.
Figure 2. Majority rule consensus tree for the 16S in Genus Baseodiscus (Nemertea: Heteronemertea): Molecular identification of a new species in a phylogenetic context
Figure 2. Majority rule consensus tree for the 16S rRNA data resulting from the Bayesian analysis (model GTR+G+I), 1,000,000 generations. Numbers refer to posterior probabilities.
Figure 1 in Genus Baseodiscus (Nemertea: Heteronemertea): Molecular identification of a new species in a phylogenetic context
Figure 1. Parsimony tree based on the 16S rRNA data with bootstrap support values from 5000 replicates (heuristic search, random additions, five replicates).
Figure 11 in Molecular identification, description, and phylogenetic implications of the tadpoles of 11 species of Malagasy treefrogs, genus Boophis
Figure 11. Drawings of the tadpole of Boophis viridis (ZSM 574/2004). (a) Dorsal view; (b) lateral view; (c) oral disc.
Figure 10 in Molecular identification, description, and phylogenetic implications of the tadpoles of 11 species of Malagasy treefrogs, genus Boophis
Figure 10. Drawings of the tadpole of Boophis tasymena (ZSM 527/2004). (a) Dorsal view; (b) lateral view; (c) oral disc.
Figure 7 in Molecular identification, description, and phylogenetic implications of the tadpoles of 11 species of Malagasy treefrogs, genus Boophis
Figure 7. Drawings of the tadpole of Boophis sibilans (ZSM 557/2004). (a) Dorsal view; (b) lateral view; (c) oral disc.
Figure 3 in Molecular identification, description, and phylogenetic implications of the tadpoles of 11 species of Malagasy treefrogs, genus Boophis
Figure 3. Drawings of the tadpole of Boophis madagascariensis (ZSM 519/2004). (a) Dorsal view; (b) lateral view; (c) oral disc.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.