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975
datasets available to search
ShareScore release 0.9.0
Dataset results
975 results for “Spatial transcriptomics”
Growth-limiting drought increases sensitivity of Asian rice (Oryza sativa) leaves to heat shock through physiological and spatially distinct transcriptomic responses
GEO Series GSE295637. Oryza sativa. 80 samples. Type: Expression profiling by high throughput sequencing.
Large field of view and spatial region of interest transcriptomics in frozen and FFPE tissue
GEO Series GSE268148. Homo sapiens; Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of whole mouse lung cells
GEO Series GSE183683. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Zika virus co-opts miRNA networks to persist in placental microenvironments detected by spatial transcriptomics [AGO-HITS-CLIP]
GEO Series GSE205609. Homo sapiens. 9 samples. Type: Other; Non-coding RNA profiling by high throughput sequencing.
Spatial transcriptomics in the postmortem brains of severe acute COVID19 [Pons]
GEO Series GSE274933. Homo sapiens. 119 samples. Type: Other.
Decoding transcriptional identity during Neuron-Astroglia Cell Fate driven by RAR-specific agonists [Spatial transcriptomics]
GEO Series GSE286250. Mus musculus. 4 samples. Type: Other.
Spatial transcriptomics reveals spatial remodling of hepatic lobule during liver regeneration
GEO Series GSE249803. Mus musculus. 4 samples. Type: Other.
Spatial Transcriptomics reveals that cells that experience intratumoral hypoxia retain hypoxia-associated transcriptional programs after invading into oxygenated tumor regions.
GEO Series GSE240212. Homo sapiens. 2 samples. Type: Other.
Spatial transcriptomics: The effect of consecutive slices data integration on accurate cell type annotation and clustering
GEO Series GSE184510. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Profiling the spatial architecture of multiple myeloma in human bone marrow trephines with spatial transcriptomics [human]
GEO Series GSE299193. Homo sapiens. 22 samples. Type: Other.
Precision targeting of beta-catenin induces tumor reprogramming and immunity in hepatocellular cancers [Spatial Transcriptomics by Resolve Biosciences Molecular Cartography]
GEO Series GSE270708. Mus musculus. 11 samples. Type: Other.
Spatially resolved integrative analysis of transcriptomic and metabolomic changes in tissue injury studies
GEO Series GSE312168. Rattus norvegicus. 1 samples. Type: Other.
Spatial transcriptome gene expression profile in 2 patients with Hashimoto's thyroiditis and 2 patients with papillary thyroid cancer combined with Hashimoto's thyroiditis.
GEO Series GSE230424. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Spatially Resolved Transcriptomics Exploration in 3D Desktop and Virtual Reality Environments with VR-Omics
GEO Series GSE252228. Homo sapiens. 12 samples. Type: Other.
Spatial transcriptomics reveals ovarian cancer subclones with different microenvironments
GEO Series GSE211956. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Microglia - astrocyte cross-talk in the amyloid plaque niche of an Alzheimer's disease mouse model as revealed by spatial transcriptomics
GEO Series GSE263793. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing; Other.
Spatially resolved transcriptomics reveals genes associated with the vulnerability of middle temporal gyrus in Alzheimer’s disease
GEO Series GSE220442. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
PRDM16 Functions as A Compact Myocardium-Enriched Transcription Factor Required to Maintain Compact Myocardial Cardiomyocyte Identity in Left Ventricle (Spatial Transcriptomics)
GEO Series GSE179392. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
GEO Series GSE74458. Arabidopsis thaliana. 30 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics of glioblastoma second surgery samples to compare progression and pseudoprogression
GEO Series GSE232050. Homo sapiens; blank sample. 192 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.