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Dataset results
915 results for “metagenomics”
zenodo28/100
Supplementary material 1 from: Schallenberg LA, Thomson-Laing G, Kelly D, Pearman JK, Howarth JD, Vandergoes MJ, Puddick J, Fitzsimons S, Rees A, Wood SA (2023) Insights into the ecological impact of trout introduction in an oligotrophic lake using sedimentary environmental DNA. Metabarcoding and Metagenomics 7: e111467. https://doi.org/10.3897/mbmg.7.111467
Supplementary data 1
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 1 from: Ács É, Bíró T, Boros E, Dobosy P, Duleba M, Földi A, Kiss KT, Levkov Z, Orgoványi P, Szén OP, Trábert Z, Vadkerti E, Grigorszky I (2023) Halamphora taxa in Hungarian soda pans and shallow soda lakes detected via metabarcoding and microscopic analyses. Metabarcoding and Metagenomics 7: e111679. https://doi.org/10.3897/mbmg.7.111679
Relative abundances of Halamphora species based on microscopy and metabarcodin
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 3 from: Ács É, Bíró T, Boros E, Dobosy P, Duleba M, Földi A, Kiss KT, Levkov Z, Orgoványi P, Szén OP, Trábert Z, Vadkerti E, Grigorszky I (2023) Halamphora taxa in Hungarian soda pans and shallow soda lakes detected via metabarcoding and microscopic analyses. Metabarcoding and Metagenomics 7: e111679. https://doi.org/10.3897/mbmg.7.111679
Supplementary Alignment 1
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 4 from: Ács É, Bíró T, Boros E, Dobosy P, Duleba M, Földi A, Kiss KT, Levkov Z, Orgoványi P, Szén OP, Trábert Z, Vadkerti E, Grigorszky I (2023) Halamphora taxa in Hungarian soda pans and shallow soda lakes detected via metabarcoding and microscopic analyses. Metabarcoding and Metagenomics 7: e111679. https://doi.org/10.3897/mbmg.7.111679
Supplementary Alignment 2
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 2 from: Ács É, Bíró T, Boros E, Dobosy P, Duleba M, Földi A, Kiss KT, Levkov Z, Orgoványi P, Szén OP, Trábert Z, Vadkerti E, Grigorszky I (2023) Halamphora taxa in Hungarian soda pans and shallow soda lakes detected via metabarcoding and microscopic analyses. Metabarcoding and Metagenomics 7: e111679. https://doi.org/10.3897/mbmg.7.111679
Pairwise p-distance values and number of differences
opencc-zeroDec 2023View details →
zenodo28/100
Supplementary material 1 from: Magesh S, Jonsson V, Bengtsson-Palme J (2019) Mumame: a software tool for quantifying gene-specific point-mutations in shotgun metagenomic data. Metabarcoding and Metagenomics 3: e36236. https://doi.org/10.3897/mbmg.3.36236
Table S1
opencc-zeroSep 2019View details →
zenodo28/100
Supplementary material 2 from: Magesh S, Jonsson V, Bengtsson-Palme J (2019) Mumame: a software tool for quantifying gene-specific point-mutations in shotgun metagenomic data. Metabarcoding and Metagenomics 3: e36236. https://doi.org/10.3897/mbmg.3.36236
Figure S1
opencc-zeroSep 2019View details →
zenodo28/100
Supplementary material 9 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Table S4
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 3 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Figure S3
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 2 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Figure S2
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 8 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Table S3
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 5 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Figure S5
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 6 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Table S1
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 5 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S3
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 6 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S4
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 1 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Figure S1
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 4 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S2
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 1 from: Pearman JK, Casas L, Michell C, Aldanondo N, Mojib N, Holtermann K, Georgakakis I, Curdia J, Carvalho S, Gusti A, Irigoien X (2022) Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters. Metabarcoding and Metagenomics 6: e79208. https://doi.org/10.3897/mbmg.6.79208
Figure S1
opencc-zeroApr 2022View details →
zenodo28/100
Supplementary material 2 from: Alter SE, Arroyave J (2022) Environmental DNA metabarcoding is a promising method for assaying fish diversity in cenotes of the Yucatán Peninsula, Mexico. Metabarcoding and Metagenomics 6: e89857. https://doi.org/10.3897/mbmg.6.89857
OTU (Operational Taxonomic Unit) table
opencc-zeroOct 2022View details →
zenodo28/100
Supplementary material 1 from: Alter SE, Arroyave J (2022) Environmental DNA metabarcoding is a promising method for assaying fish diversity in cenotes of the Yucatán Peninsula, Mexico. Metabarcoding and Metagenomics 6: e89857. https://doi.org/10.3897/mbmg.6.89857
Summary results from initial eDNA raw data processing
opencc-zeroOct 2022View details →
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record