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492
datasets available to search
ShareScore release 0.9.0
Dataset results
492 results for “sequence modeling”
High Throughput Sequencing of a Mouse Model for Benign Prostatic Hyperplasia (BPH)
GEO Series GSE167196. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA sequencing reveals limited effects of Lrrk2 genotype in a mouse model of acute CNS inflammation
GEO Series GSE265833. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Next generation sequencing for miRNA profile of blood sample of goiter rat model treated by quemeiteng granule
GEO Series GSE211703. Rattus norvegicus. 18 samples. Type: Non-coding RNA profiling by high throughput sequencing.
An inflammatory single-cell RNA sequencing signature driven by metabolic stress in a new mouse model of heart failure with preserved ejection fraction and its reversion by the SGLT2 inhibitor dapaglif
GEO Series GSE237156. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
RNA-Sequencing Analysis of HP-AKI Murine Model
GEO Series GSE243366. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
RNA-sequencing of the Math1-Cre SmoM2 mouse genetic model of medulloblastoma
GEO Series GSE104633. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Sequencing of canine and genetically-engineered mouse models for endotype identification of embryonal rhabdomyosarcoma
Here, we report using RNA sequencing isolated from frozen tumor samples from genetically-engineered mouse models and canine samples, as well as a preserved mouse cell culture to determine endotypes, or subtypes with distinct pathobiological mechanisms, of embryonal rhabdomyosarcoma (ERMS) and nonrhabdomyosarcoma soft tissue sarcomas (NRSTS). With an unsupervised clustering approach of DNA and RNA sequencing from mouse models, canine samples, patient-derived xenograft models, and human samples we have found several major endotypes with a wide range of putative driver mutations. This study aims to define each of the several pathological mechanisms driving tumor maintenance in these tumors in order to identify effective targeted treatments for individual patients.
Single-cell RNA Sequencing Reveals Immunosuppressive Myeloid Cell Diversity During Malignant Progression in a murine model of glioma
GEO Series GSE221440. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
RNA-sequencing (RNA-seq) analysis of liver tissues from WT and AKR1D1KO mice in Hepa1-6-induced HCC model.
GEO Series GSE279123. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Next-generation RNA-sequencing data of models of Ewing sarcoma with modulated expression of the lncRNA HOTAIR
GEO Series GSE109483. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.
An inflammatory single-cell RNA sequencing signature driven by metabolic stress in a new mouse model of heart failure with preserved ejection fraction and its reversion by the SGLT2 inhibitor dapaglif
GEO Series GSE209548. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
The molecular raw data of microbial communities associated with fish gut - in vitro model system using 16S rRNA Illumina amplicon sequencing approach.
<p>This data on the microbial communities and its diversity associated with fish gut. The samples were obtained from fish gut - in vitro model system using 16S rRNA Illumina amplicon sequencing approach.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.