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3,292 results for “DNA Barcode”
FIGURES 8–10 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode
FIGURES 8–10. Plutomurus jangamensis sp. nov.: 8, Spine-like chaetae on hind leg; 9, Trochanteral-femoral organ in hind leg; 10, Claw. Scale bar: 0.05mm.
FIGURES 2–4 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode
FIGURES 2–4. Plutomurus jangamensis sp. nov.: 2a, Habitus of new species and 2b, Plutomurus gul Yosii, 1966; 3, Head cheatotaxy; 4a, Picture of micro-sensillum (The arrow indicates micro-sensillum); 4b, Body cheatotaxy (Th. II–Abd. VI). Large empty circles represent macrochaetae; Black circles represent mesochaetae; Circles with a slash represent pseudopore; Circles with three lines represent bothriotricha; Comma-shape represent micro-sensilla.
FIGURES 5–7 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode
FIGURES 5–7. Plutomurus jangamensis sp. nov.: 5, Labial palp; 6, Maxillary head; 7, Labrum (Arrows indicate prelabral chaetae). Scale bar: 0.05mm.
FIGURES 11–12 in Report on a new species of Plutomurus (Collembola, Tomoceridae) from a South Korean limestone cave, with notes on its DNA barcode
FIGURES 11–12. Plutomrus jangamensis sp. nov.: 11a, and 11b, Dental spines; 11c, Picture of small spines on dens; 12, Mucronal teeth (Scale bar: 0.05mm).
Figure 19 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 19. Statistical parsimony network of mtDNA haplotypes produced by TCS based on CO1 partial sequences (654 bp). High numbers of 'missing haplotypes' are indicated by their respective count. Coloured circles represent existing haplotypes from the sample set.
Figure 18 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 18. Map of Sabah and Brunei (Borneo) with collecting site of Grouvellinus species with new species record in red fonts.
Figures 2–5 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figures 2–5. Habitus of the Grouvellinus species collected from the Tawan Hills Park. 2: G. andrekuipersi; 3: G. nigerquadratus, sp. nov. (paratype male from Tawau River); 4: G. nigerquadratus, sp. nov. (male from Lucia River); 5: G.cruxniger, sp. nov. (paratype male from Lucia River). Scale: 1 mm.
Figure 17 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 17. Grouvellinus borneensis, sp. nov. (paratypes): (a) aedeagus, lateral; (b) aedeagus, ventral; (c) ovipositor (half), ventral. Scale bar = 0.1 mm.
Figure 16 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 16. Grouvellinus borneensis, sp. nov. (paratypes): (a) anteriodorsal aspect with pronotum and elytra; (b) ventral aspect with prosternum and mesoventrite; (c) posteriodorsal aspect with metaventrite and ventrites 1–5.
Figure 14 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 14. Grouvellinus luciaensis, sp. nov. (paratypes): (a) anteriodorsal aspect with pronotum; (b) anterioventral aspect with head and prosternum; (c) ventral aspect with prosternum and mesoventrite, (d) posterioventral aspect with metaventrite and ventrites 1–5.
Figure 12 in Additional new species of Grouvellinus Champion 1923 (Insectaı Coleopteraı Elmidae) discovered by citizen scientists and DNA barcoded in the field applying a novel MinIONbased workflow
Figure 12. Grouvellinus cruxniger, sp. nov. (paratypes): (a) anteriodorsal aspect with pronotum and elytra; (b) ventral aspect with prosternum, meso-, metaventrite, and ventrites 1–5.
FIGURE 6 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies
FIGURE 6. Intertidal coast of Qeshm Island, Iran, type locality of Silhouettea ghazalae. Photo by R. Sadeghi.
FIGURE 4 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies
FIGURE 4. Silhouettea ghazalae sp. nov., PMR VP4678, holotype, Qeshm Island, Persian Gulf. Nape and predorsal region with median white spot marked: A: freshly collected specimen; B: preserved specimen. Photos by R. Sadeghi (A), M. Kovačić (B).
FIGURE 3 in New species of Silhouettea (Teleostei: Gobiidae) from Qeshm Island, Iran and the DNA barcoding of the Persian Gulf and Oman Sea gobies
FIGURE 3. Silhouettea ghazalae sp. nov. Head lateral line sensory papillae and canal pores: PMR VP4678, holotype, female, 27.35 + 6.29 mm, Qeshm Island, Persian Gulf. Terminology in text. Drawing by M. Kovačić.
Supplementary data for Cariou et al (2020, Molecular Ecology Resources, "How consistent is RAD-seq divergence with DNA-barcode based clustering in insects?")
<p>This dataset accompanies a paper by Cariou et al, to be published in Molecular Ecology Resources, where we assessed in 92 insect species if the genetic clustering of specimens into species like units, on the basis of mitochondrial DNA, was consistent with genome wide divergence, as estimated by RAD-seq data. The present repository includes: (1) a detailed description of the bioinformatic analysis indicating which programs were used, together with parameter values, (2) the raw RAD-seq data following demultiplexing, (3) the consensus sequences of all RAD loci for all specimens, and (4) large tables indicating genetic distances at all RAD loci for all species.</p>
Figure 3 in DNA Barcodes Reveal High Genetic Diversity in Philippine Fruit Bats
Figure 3. COI ML tree for Pteropodidae dataset using GTR+G+I model of substitution. Bootstrap supports 50% or greater are shown in the nodes. Clades with more than one sequence have been compressed. Labels indicate scientific name and number of sequences for that taxon in the clade. Scientific names in bold text indicate known Philippine endemic species. Colored shapes indicate the geographic origin of the sequences from Genbank and BOLD: purple – Southeast Asia, red – East Asia, blue – South Asia, white – Middle East, yellow – Africa, and black – Oceania. Red lines indicate sequences generated by this study. Scale indicates five nucleotide substitutions per 100 nucleotides.
Figure 2 in DNA Barcodes Reveal High Genetic Diversity in Philippine Fruit Bats
Figure 2. COI NJ tree for Pteropodidae dataset using K2P model of substitution. Bootstrap supports 50% or greater are shown in the nodes. Clades with more than one sequence have been compressed. Labels indicate scientific name and number of sequences for that taxon in the clade. Red lines indicate Philippine pteropodid sequences generated in this study. Scientific names in bold text indicate known Philippine endemic species. Colored shapes indicate the geographic origin of the sequences from Genbank and BOLD: purple – Southeast Asia, red – East Asia, blue – South Asia, white – Middle East, yellow – Africa, and black – Oceania. Scale indicates two nucleotide substitutions per 100 nucleotides.
FIGURE 3 in DNA barcodes and morphology confirm a new species of Rheocricotopus (Psilocricotopus) orientalis group (Diptera: Chironomidae)
FIGURE 3. Neighbor joining tree for four species of the Rheocricotopus (Psilocricotopus) orientalis group based on K2P distance in DNA barcodes. Numbers on branches represent bootstrap support (>70%) based on 1000 replicates; scale equals K2P genetic distance.
FIGURE 1 in DNA barcodes and morphology confirm a new species of Rheocricotopus (Psilocricotopus) orientalis group (Diptera: Chironomidae)
FIGURE 1. Body photographs of the Rheocricotopus (Psilocricotopus) orientalis group, adult males in ethanol. A. Rheocricotopus calviculus Wang et Saether, 2001; B. Rheocricotopus kongi sp. n.; C. Rheocricotopus orientalis Wang, 1995; D. Rheocricotopus villiculus Wang et Saether, 2001.
FIGURES 7–14 in Taxonomy of some Boreoheptagyiini Brundin (Diptera: Chironomidae Diamesinae) from the mountains of Central Asia and the Middle East, with description and DNA barcoding of new taxa
FIGURES 7–14. Palatovia lorestanica sp. nov., male. 7, hypopygium in dorsal view; 8, hypopygium in ventral view; 9, wing; 10, antenna; 11, head; 12, transverse sternapodema and aedeagal lobes; 13, thorax in lateral view; 14, gonostylus in ventral view.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.